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The map label for this gene is hycF [C]

Identifier: 126698205

GI number: 126698205

Start: 751318

End: 751548

Strand: Direct

Name: hycF [C]

Synonym: CD0627A

Alternate gene names: 126698205

Gene position: 751318-751548 (Clockwise)

Preceding gene: 126698204

Following gene: 126698206

Centisome position: 17.51

GC content: 32.47

Gene sequence:

>231_bases
ATGTCTAATAAAAAAAAGAAGTATGCAAATATTTTAGCAAATGAGTGCGTTGCTTGTGGTAGCTGTATAAAAGCATGTCC
AAGAAGTGCTATCTCAGTTCCATGTGGCATTAGTGCAAAAATTAATAGAGATTTATGTGTTGGATGTGGGATTTGTGAAA
AGATATGTCCAGCATCTGTAATTGAGATTATAACAATATTAAAAGAGGAAGAAGGTAAGTGTCATGAATAA

Upstream 100 bases:

>100_bases
AGTGTGATTTTTAATATTGAGGTTTTATGTGATTAAGTCACAGATAAAAAGTAAGTATCTTGATATAATTCTTATAGATT
AATAATATAGGGAGGTTATT

Downstream 100 bases:

>100_bases
TAAAAAACATTGGTATGACTATTTATGGATTTTTTCTTCAATATATTTGATATTGGGATTTGTAAATATTATTTTCGCTT
GGATTGGGCTAATTTGTTTC

Product: ferredoxin

Products: CO2; H2; oxidized ferredoxin + [C]

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MSNKKKKYANILANECVACGSCIKACPRSAISVPCGISAKINRDLCVGCGICEKICPASVIEIITILKEEEGKCHE

Sequences:

>Translated_76_residues
MSNKKKKYANILANECVACGSCIKACPRSAISVPCGISAKINRDLCVGCGICEKICPASVIEIITILKEEEGKCHE
>Mature_75_residues
SNKKKKYANILANECVACGSCIKACPRSAISVPCGISAKINRDLCVGCGICEKICPASVIEIITILKEEEGKCHE

Specific function: Probable Electron Transfer Protein For Hydrogenase 3 [C]

COG id: COG1245

COG function: function code R; Predicted ATPase, RNase L inhibitor (RLI) homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8101; Mature: 7970

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

13.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
14.5 %Cys+Met (Translated Protein)
13.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
13.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKKKKYANILANECVACGSCIKACPRSAISVPCGISAKINRDLCVGCGICEKICPASV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCHHHH
IEIITILKEEEGKCHE
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNKKKKYANILANECVACGSCIKACPRSAISVPCGISAKINRDLCVGCGICEKICPASV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCHHHH
IEIITILKEEEGKCHE
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; Proton; reduced ferredoxin [C]

Specific reaction: formate = CO2 + H2 Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA