Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is yccK [H]

Identifier: 126698140

GI number: 126698140

Start: 668172

End: 669167

Strand: Direct

Name: yccK [H]

Synonym: CD0561

Alternate gene names: 126698140

Gene position: 668172-669167 (Clockwise)

Preceding gene: 126698139

Following gene: 126698142

Centisome position: 15.57

GC content: 31.02

Gene sequence:

>996_bases
ATGAGAAATTTAGGCAATACTAACATGAAAATAAAGAGAGTTGGCTTTGGGGGCATTCCAATACAAAGGATTACTCAAGA
TGATACTAACTTAGTTATAAATGAGTTAGAAAAACAAGGAATAAACTTTATTGACAGTGCAAGAGGGTATACAATAAGTG
AGGAAGCAATCGGAATTGCCATTGAAGGAAAAAGAGATAAATTTTTCTTAGCTACTAAAAGTATGTCCAGAGATTATGAT
TCAATGAAGAGAGATGTTGAAATAAGTTTAAATAATTTTAAAACTGATTTTATAGATTTATATCAATTCCATAATGTTAA
AGAAGAGGAGTATGATAATCTTTTTAAAGATAAAATGGCTTATAGTGCCCTTTTAGAGGCAAAGGAGCAAGGTAAGATAA
AACATATTGGTATAACTAGTCACAATTTAAATACTATAGAAAAAGCTATAGAAGATGGAAAATTTGACACTATACAATTC
CCTTACAATATAGTTGAAGGACAAGCAGATGAAGTGTTTAAAAAAGCTCATGAAAAAGGAATTGGGATAATAGTAATGAA
ACCTTTAGCTGGAGGTGCTTTAGACAATGCAACACTGGCTATTAAATATATACTATCTAAAGATTACATAGATGTAGTTA
TACCAGGTATGGAGAGTGTTGAACAGGTTAGACAAAATGTCGCTGTACTTGAAAATCTTGTGCTAGATGAAAAAGATAAT
AAGGAAATTGAAGAAATAAGAAATTCTTTAGGTAAAAAATTCTGTAGAAGATGCGAATATTGTATGCCTTGTGCTGTAGG
AATAAATATACCATTGAGTTTTTTATGTGAAGGTTATTATACTAGATATGGATTAAAAGAGTGGGCTAAAGAAAAATATG
AGGTTATGGATGTTAAACCTACTGAGTGTATTGACTGTGGGCTTTGCGAGAGTAGATGTCCATATGAACTTCCTATAAGA
GAAATGCTTAAGACTGTTGTTGAAAAGCTAGGATAG

Upstream 100 bases:

>100_bases
TATGTAAATATATTGCAAAGATTCTCATAATTTGTTGTATAATTAAAGGTGACATATTTATATTATATAAAAAATTATTA
AAAGTTAGGTGGGGAAAGAT

Downstream 100 bases:

>100_bases
ATTTTATTTATTGAAATCGGTGTATTAAATTTACTCCGATTTCTTTTTATTAGATGTGGTCTTATATACAAATATTAAAT
TTACATAGTTATAGCTATTA

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MRNLGNTNMKIKRVGFGGIPIQRITQDDTNLVINELEKQGINFIDSARGYTISEEAIGIAIEGKRDKFFLATKSMSRDYD
SMKRDVEISLNNFKTDFIDLYQFHNVKEEEYDNLFKDKMAYSALLEAKEQGKIKHIGITSHNLNTIEKAIEDGKFDTIQF
PYNIVEGQADEVFKKAHEKGIGIIVMKPLAGGALDNATLAIKYILSKDYIDVVIPGMESVEQVRQNVAVLENLVLDEKDN
KEIEEIRNSLGKKFCRRCEYCMPCAVGINIPLSFLCEGYYTRYGLKEWAKEKYEVMDVKPTECIDCGLCESRCPYELPIR
EMLKTVVEKLG

Sequences:

>Translated_331_residues
MRNLGNTNMKIKRVGFGGIPIQRITQDDTNLVINELEKQGINFIDSARGYTISEEAIGIAIEGKRDKFFLATKSMSRDYD
SMKRDVEISLNNFKTDFIDLYQFHNVKEEEYDNLFKDKMAYSALLEAKEQGKIKHIGITSHNLNTIEKAIEDGKFDTIQF
PYNIVEGQADEVFKKAHEKGIGIIVMKPLAGGALDNATLAIKYILSKDYIDVVIPGMESVEQVRQNVAVLENLVLDEKDN
KEIEEIRNSLGKKFCRRCEYCMPCAVGINIPLSFLCEGYYTRYGLKEWAKEKYEVMDVKPTECIDCGLCESRCPYELPIR
EMLKTVVEKLG
>Mature_331_residues
MRNLGNTNMKIKRVGFGGIPIQRITQDDTNLVINELEKQGINFIDSARGYTISEEAIGIAIEGKRDKFFLATKSMSRDYD
SMKRDVEISLNNFKTDFIDLYQFHNVKEEEYDNLFKDKMAYSALLEAKEQGKIKHIGITSHNLNTIEKAIEDGKFDTIQF
PYNIVEGQADEVFKKAHEKGIGIIVMKPLAGGALDNATLAIKYILSKDYIDVVIPGMESVEQVRQNVAVLENLVLDEKDN
KEIEEIRNSLGKKFCRRCEYCMPCAVGINIPLSFLCEGYYTRYGLKEWAKEKYEVMDVKPTECIDCGLCESRCPYELPIR
EMLKTVVEKLG

Specific function: Unknown

COG id: COG1453

COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788070, Length=322, Percent_Identity=24.5341614906832, Blast_Score=72, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24646159, Length=219, Percent_Identity=25.5707762557078, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24646155, Length=217, Percent_Identity=26.2672811059908, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37766; Mature: 37766

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLGNTNMKIKRVGFGGIPIQRITQDDTNLVINELEKQGINFIDSARGYTISEEAIGIA
CCCCCCCCEEEEEECCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCEECCCCEEEE
IEGKRDKFFLATKSMSRDYDSMKRDVEISLNNFKTDFIDLYQFHNVKEEEYDNLFKDKMA
EECCCCEEEEEECHHHCCHHHHHCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
YSALLEAKEQGKIKHIGITSHNLNTIEKAIEDGKFDTIQFPYNIVEGQADEVFKKAHEKG
HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCHHHHCCCHHHHHHHHHHCC
IGIIVMKPLAGGALDNATLAIKYILSKDYIDVVIPGMESVEQVRQNVAVLENLVLDEKDN
CEEEEECCCCCCCCCCHHEEEEEHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCC
KEIEEIRNSLGKKFCRRCEYCMPCAVGINIPLSFLCEGYYTRYGLKEWAKEKYEVMDVKP
HHHHHHHHHHHHHHHHHCCHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC
TECIDCGLCESRCPYELPIREMLKTVVEKLG
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRNLGNTNMKIKRVGFGGIPIQRITQDDTNLVINELEKQGINFIDSARGYTISEEAIGIA
CCCCCCCCEEEEEECCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCEECCCCEEEE
IEGKRDKFFLATKSMSRDYDSMKRDVEISLNNFKTDFIDLYQFHNVKEEEYDNLFKDKMA
EECCCCEEEEEECHHHCCHHHHHCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
YSALLEAKEQGKIKHIGITSHNLNTIEKAIEDGKFDTIQFPYNIVEGQADEVFKKAHEKG
HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCHHHHCCCHHHHHHHHHHCC
IGIIVMKPLAGGALDNATLAIKYILSKDYIDVVIPGMESVEQVRQNVAVLENLVLDEKDN
CEEEEECCCCCCCCCCHHEEEEEHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCC
KEIEEIRNSLGKKFCRRCEYCMPCAVGINIPLSFLCEGYYTRYGLKEWAKEKYEVMDVKP
HHHHHHHHHHHHHHHHHCCHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC
TECIDCGLCESRCPYELPIREMLKTVVEKLG
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377; 9106203 [H]