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The map label for this gene is yhbA [H]

Identifier: 126698142

GI number: 126698142

Start: 670855

End: 671769

Strand: Direct

Name: yhbA [H]

Synonym: CD0563

Alternate gene names: 126698142

Gene position: 670855-671769 (Clockwise)

Preceding gene: 126698140

Following gene: 126698143

Centisome position: 15.64

GC content: 26.34

Gene sequence:

>915_bases
ATGGATAATAAGGAATTAAAAGCATTTTGTAATTTAATAGGATTAAACTGTGTAGGAGTAGCAGGGGTAGATAAGTATGA
TAATTTAGAAAAGATACTTAAGGACAGACAACAAAAAGGTTATTTAACTGGTATGGAAGAACCAATAATTGAGAACAGAA
TTAACCCAAGACATATAATGAAGGATGCTAACTCTATAATAGTCTGTGCATTTCCATATCATATAAATAGACAAGAAAAG
AATAAAAATTCAAATTTATCAAAATATTGTCATGGAAAGGATTATCACATTGTAGTAAAGGACTTTTTACAACAAATTTG
TGATTATATTTCTAAAACAGTAACAGATTTTAAATACAAGTTATTTGCTGATAATGGACCATTAGTTGACAGGTATTTAG
CTTATTTATCAGGAATAGGATATTTTGGAATAAATAATAATATCATAACTGATGAATATGGTTCTTATGTATTTATAGGG
TATATAGTAAATAATTATAAATTTGAAGAAGATAAACCACTAGAAAAAAGTTGTTTTAAATGTGGTAAGTGTGTAAAATA
TTGTCCGGGAAATGCTATATTGGGAAATTATGATATGAACCCCAAAAAATGTTTATCATATATAACTCAAAAAAAAGGAG
ATTTGTCAGAGAAAGAAAAAGTTGTTTTAAAGAATGGCAAAAAGGTATTTGGATGCGATATTTGTCAAGAAGTATGTCCA
CATAATGTTGAAATACCAACAACTCATATTTTGGAATTTAAAGAAAATATAATAGATTATTTGGATTATGATGAGATACA
AAATATTTCAAATAAAGAATTTAAAAGGAGATATGGAGATAGAGCTTTTAGCTGGAGAGGGAGAAATATAATAAAGAGAA
ATATGGAAATAATTTTAGATAAGTATGATGACTAA

Upstream 100 bases:

>100_bases
AGATTAAGTATTTAAAAGAGTTAGTAGCTAGAAAAGGTTAAAAAGACTAAAAAAATTAAATAAATTTAAAAAGTCAATTA
GATTAAAAAGGAATAATTTT

Downstream 100 bases:

>100_bases
TAATAAGAGTCTGTTTCATATACTTTAATGTGTATTTACTTTAACACTTGTTGTGTAAAAGTCATATTATATCATTAAAG
TTAAATATGGGGAGGTGGGG

Product: iron-sulfur cluster protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MDNKELKAFCNLIGLNCVGVAGVDKYDNLEKILKDRQQKGYLTGMEEPIIENRINPRHIMKDANSIIVCAFPYHINRQEK
NKNSNLSKYCHGKDYHIVVKDFLQQICDYISKTVTDFKYKLFADNGPLVDRYLAYLSGIGYFGINNNIITDEYGSYVFIG
YIVNNYKFEEDKPLEKSCFKCGKCVKYCPGNAILGNYDMNPKKCLSYITQKKGDLSEKEKVVLKNGKKVFGCDICQEVCP
HNVEIPTTHILEFKENIIDYLDYDEIQNISNKEFKRRYGDRAFSWRGRNIIKRNMEIILDKYDD

Sequences:

>Translated_304_residues
MDNKELKAFCNLIGLNCVGVAGVDKYDNLEKILKDRQQKGYLTGMEEPIIENRINPRHIMKDANSIIVCAFPYHINRQEK
NKNSNLSKYCHGKDYHIVVKDFLQQICDYISKTVTDFKYKLFADNGPLVDRYLAYLSGIGYFGINNNIITDEYGSYVFIG
YIVNNYKFEEDKPLEKSCFKCGKCVKYCPGNAILGNYDMNPKKCLSYITQKKGDLSEKEKVVLKNGKKVFGCDICQEVCP
HNVEIPTTHILEFKENIIDYLDYDEIQNISNKEFKRRYGDRAFSWRGRNIIKRNMEIILDKYDD
>Mature_304_residues
MDNKELKAFCNLIGLNCVGVAGVDKYDNLEKILKDRQQKGYLTGMEEPIIENRINPRHIMKDANSIIVCAFPYHINRQEK
NKNSNLSKYCHGKDYHIVVKDFLQQICDYISKTVTDFKYKLFADNGPLVDRYLAYLSGIGYFGINNNIITDEYGSYVFIG
YIVNNYKFEEDKPLEKSCFKCGKCVKYCPGNAILGNYDMNPKKCLSYITQKKGDLSEKEKVVLKNGKKVFGCDICQEVCP
HNVEIPTTHILEFKENIIDYLDYDEIQNISNKEFKRRYGDRAFSWRGRNIIKRNMEIILDKYDD

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=248, Percent_Identity=27.0161290322581, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 35381; Mature: 35381

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKELKAFCNLIGLNCVGVAGVDKYDNLEKILKDRQQKGYLTGMEEPIIENRINPRHIM
CCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHH
KDANSIIVCAFPYHINRQEKNKNSNLSKYCHGKDYHIVVKDFLQQICDYISKTVTDFKYK
HCCCCEEEEEECCCCCCHHCCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHEEE
LFADNGPLVDRYLAYLSGIGYFGINNNIITDEYGSYVFIGYIVNNYKFEEDKPLEKSCFK
EEECCCCHHHHHHHHHHCCCEECCCCCEECCCCCCEEEEEEEEECEECCCCCCHHHHHHH
CGKCVKYCPGNAILGNYDMNPKKCLSYITQKKGDLSEKEKVVLKNGKKVFGCDICQEVCP
HHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECHHHHHHHCC
HNVEIPTTHILEFKENIIDYLDYDEIQNISNKEFKRRYGDRAFSWRGRNIIKRNMEIILD
CCCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHEE
KYDD
CCCC
>Mature Secondary Structure
MDNKELKAFCNLIGLNCVGVAGVDKYDNLEKILKDRQQKGYLTGMEEPIIENRINPRHIM
CCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHH
KDANSIIVCAFPYHINRQEKNKNSNLSKYCHGKDYHIVVKDFLQQICDYISKTVTDFKYK
HCCCCEEEEEECCCCCCHHCCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHEEE
LFADNGPLVDRYLAYLSGIGYFGINNNIITDEYGSYVFIGYIVNNYKFEEDKPLEKSCFK
EEECCCCHHHHHHHHHHCCCEECCCCCEECCCCCCEEEEEEEEECEECCCCCCHHHHHHH
CGKCVKYCPGNAILGNYDMNPKKCLSYITQKKGDLSEKEKVVLKNGKKVFGCDICQEVCP
HHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECHHHHHHHCC
HNVEIPTTHILEFKENIIDYLDYDEIQNISNKEFKRRYGDRAFSWRGRNIIKRNMEIILD
CCCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHEE
KYDD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]