Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is ykvI [H]

Identifier: 126697703

GI number: 126697703

Start: 175896

End: 176993

Strand: Direct

Name: ykvI [H]

Synonym: CD0131

Alternate gene names: 126697703

Gene position: 175896-176993 (Clockwise)

Preceding gene: 126697702

Following gene: 126697704

Centisome position: 4.1

GC content: 31.97

Gene sequence:

>1098_bases
ATGTCAGGCAAAGTAAATATTAAAACGGTTATAAGTTTTGCTGGAGCTTATGTTGCTACTGTAATAGGTTCTGGATTTGC
AACTGGTCAAGAAATACTGCAATTTTTTACGTTTTATGGATATGCGGGTATTATAGGTGGAATAATCTCTATGGTACTAT
TTTCATGGTTTGGAGCAGAAGTTATAGATAAGGGAAGAGAATTGAAACTTAAGGAGCCAATAAAAATTTATCAAGTATAT
TGTGGAAAATATCTTGGAACATTTTTTGAATGGTTTGGTCCATTGTTTTTATTTGGAACATTAGTAATAATGATTGCAGG
AGCAGGAGCTACATTATCAGAGTACTATGGATTAAATCCATATGTAGGTAGGATTGGTATGGCAATCGTTTCCCTAATAA
CTGTTTCATTAGGTTTGACAAGGCTTTCTAAAATACTAGGTAATATAGGACCTATAATAATAATATTTACACTTTTAGTA
GGAGCAATTAGTTTATTTAGCAATATTGATGCTTTATCAAATGCTGGAAATATGGTTGATAGTTTAAATATTAAAACTGC
TACATCAAATGGATATTTCTCGGGAGTACTTTATACTTGTTACAATGTAATAATAGTAATAACATTCTTGACAGGAATGG
GAGCTTCTGCAGTAAATAAGAAAGATGCTGTATGGGGTGGTATAGTAGGTGGAGTAGCACTTATGGCAGCAGCTATAATG
ATGAATTTGGCATTACTTTCAGACATAGGAAATATATACACAAAAGAGATACCAGCACTTTACTTAGCTGATAAGATATC
TCCAATAATAGGTATTTTATTCTCAGTAGTACTTTTACTAGGAATATACACTACAGCTGTACCATTGTTATGGTCAGTAA
CAAACCGATTTGTAGAAGATGACCACCCTAAGTTTAAAATTATAACAATAGTGGTAAGTATATTAGCTTGTATAGGAGGT
TTACTGCCATTTGATAAGTTAGTAGGTACACTATATCCATATACAGGTTACATGGGAATTTTAATTTTACTATGTATGCT
TTATAGAAGAATTACTAAAACTGAGGGGTACAAGGAGAATAAATCTGAAATAAGTTAG

Upstream 100 bases:

>100_bases
TAAATAATTAAAAATATATTGAAATATCACAATAATGAGTCTAATATAATCTTAATAAACTTACACTTTAAAAATAATTT
TAATTGGGGGGGAGTAGTGT

Downstream 100 bases:

>100_bases
TACTGTAATATACTTATGAAATTTAATTTATACTCTAAATATAGAGTAATTAAAATAAAATAGCTATTTAAATATGGTAC
CTGTATTTCATGGTACCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSGKVNIKTVISFAGAYVATVIGSGFATGQEILQFFTFYGYAGIIGGIISMVLFSWFGAEVIDKGRELKLKEPIKIYQVY
CGKYLGTFFEWFGPLFLFGTLVIMIAGAGATLSEYYGLNPYVGRIGMAIVSLITVSLGLTRLSKILGNIGPIIIIFTLLV
GAISLFSNIDALSNAGNMVDSLNIKTATSNGYFSGVLYTCYNVIIVITFLTGMGASAVNKKDAVWGGIVGGVALMAAAIM
MNLALLSDIGNIYTKEIPALYLADKISPIIGILFSVVLLLGIYTTAVPLLWSVTNRFVEDDHPKFKIITIVVSILACIGG
LLPFDKLVGTLYPYTGYMGILILLCMLYRRITKTEGYKENKSEIS

Sequences:

>Translated_365_residues
MSGKVNIKTVISFAGAYVATVIGSGFATGQEILQFFTFYGYAGIIGGIISMVLFSWFGAEVIDKGRELKLKEPIKIYQVY
CGKYLGTFFEWFGPLFLFGTLVIMIAGAGATLSEYYGLNPYVGRIGMAIVSLITVSLGLTRLSKILGNIGPIIIIFTLLV
GAISLFSNIDALSNAGNMVDSLNIKTATSNGYFSGVLYTCYNVIIVITFLTGMGASAVNKKDAVWGGIVGGVALMAAAIM
MNLALLSDIGNIYTKEIPALYLADKISPIIGILFSVVLLLGIYTTAVPLLWSVTNRFVEDDHPKFKIITIVVSILACIGG
LLPFDKLVGTLYPYTGYMGILILLCMLYRRITKTEGYKENKSEIS
>Mature_364_residues
SGKVNIKTVISFAGAYVATVIGSGFATGQEILQFFTFYGYAGIIGGIISMVLFSWFGAEVIDKGRELKLKEPIKIYQVYC
GKYLGTFFEWFGPLFLFGTLVIMIAGAGATLSEYYGLNPYVGRIGMAIVSLITVSLGLTRLSKILGNIGPIIIIFTLLVG
AISLFSNIDALSNAGNMVDSLNIKTATSNGYFSGVLYTCYNVIIVITFLTGMGASAVNKKDAVWGGIVGGVALMAAAIMM
NLALLSDIGNIYTKEIPALYLADKISPIIGILFSVVLLLGIYTTAVPLLWSVTNRFVEDDHPKFKIITIVVSILACIGGL
LPFDKLVGTLYPYTGYMGILILLCMLYRRITKTEGYKENKSEIS

Specific function: Unknown

COG id: COG3949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39378; Mature: 39247

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure 
SGKVNIKTVISFAGAYVATVIGSGFATGQEILQFFTFYGYAGIIGGIISMVLFSWFGAE
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
VIDKGRELKLKEPIKIYQVYCGKYLGTFFEWFGPLFLFGTLVIMIAGAGATLSEYYGLNP
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCH
YVGRIGMAIVSLITVSLGLTRLSKILGNIGPIIIIFTLLVGAISLFSNIDALSNAGNMVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SLNIKTATSNGYFSGVLYTCYNVIIVITFLTGMGASAVNKKDAVWGGIVGGVALMAAAIM
HCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MNLALLSDIGNIYTKEIPALYLADKISPIIGILFSVVLLLGIYTTAVPLLWSVTNRFVED
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DHPKFKIITIVVSILACIGGLLPFDKLVGTLYPYTGYMGILILLCMLYRRITKTEGYKEN
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
KSEIS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]