| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447330
Identifier: 126447330
GI number: 126447330
Start: 1763191
End: 1764423
Strand: Reverse
Name: 126447330
Synonym: BMA10247_A1832
Alternate gene names: NA
Gene position: 1764423-1763191 (Counterclockwise)
Preceding gene: 126446307
Following gene: 126447871
Centisome position: 75.0
GC content: 67.56
Gene sequence:
>1233_bases ATGAGTCTGACCATCAGCGAGATCCTGCAACTGCCCGGTCTCGAAGAGCTCCAGCTGCGCGCGGGCGAGCGCAGCGTGCA GCGGCCGGTGCGCTGGTACTACGTCGCGGAGAACGAAGGCATCGCCGATTGGGTGATGGGCGGCGAGCTCGTGTTCGTCA CCGGGATCAATCATCCGTGCGACGAGGCGAACCTGCTGCAGCTGATTCGCGAGGGCGCGAAGAGCCGCATCGCCGGGATG GTGATCCTGACGGGCGAGGCGTTCATCCGCCGCATCCCCGATTCGGTCGTCGCGCTTGCCGAGCAGCTCGAGATCGTGCT GATCGAGCAGCCGTATCTGCTGAAGATGGTGATCGTCACGCAGTTGATCGGCACCGCGCTCGCGCGGCACGAGAACACGC TGCGCTCGCAGCGCGACATCGTGAACCAGCTGCTGACGGGCGACTACCCGAGCATCGACATCGCCGCCCATCGCGCGCGC AATCTGCAGCTCGCGCTCGATCGGCCGCGCCGCGTCGTCGCGCTGCGGCTCGCGGGCGTGCCCGCGCTTTTCGAAGGGCG CGATCCGGCCGCGGCGGAGGCGCTGCTGCAGGATGCACGGCAGACGGTTCAGCGCGGCCTCGACGACTGGCTGCGCGACG AGGAAGGCGCACTGCCCGTCGTCGAGCAGGGCGAGCTGTTCGTGCTGCTGCTGCCGTGCGACGATCCGCGCTTCAGGAAG CAAAAGCTCGCGCTCGGCGCGCTGCGCGACGCGTTGAACCGGCAAACCGGGCCGCTCGCGCTGTTCGTCGGGATTTCGTC GACGGTCGGCGCCGCGCGCCATTACTGCCGCGGGCTCGCCGAGGCGCGGCAGGCGCTCGGCGTCGCCGAGGGCATGCGCG CGGGGCAGGGCCTGTGCGACTACAGCGAGCTCGGCGTGCTGAAGCTGCTCGCCGCGATTCCCGATCCGACGCTGATCGAC GGCTTCGTGAAGGAAACGCTCGGCAATCTGCTCGACAGCAACCGCAAGCATCCGACGATGCTGATCGAGACGCTCGAGGC GCTGCTTCAGGAAAACGGCAACGCGATCAAGGCGGCCGAGCAGTTGTCGATCCACCGCAACACGCTCAATCACCGGCTGC GCAGGATCGAGACGCAGTCGGGGCAATCGCTCGCCGATCCGTATTTTCGGCTGAACGCATCCGTCGCGCTGCTCGCGTGG CGGATGTCGGATACGCAACGACAGGAGTTCTGA
Upstream 100 bases:
>100_bases CCGCTCGTCGGCATCGCCGCGTCGTCGTTCTGCTACATCGTGTTCGTGCAGATCGCGGGCCGCGCGGTGCGCGCGCCGTC GGTCCAGGGAGAGTGAAGCG
Downstream 100 bases:
>100_bases TGAAGCTCATCAACGCGACGCTGCGCAAGCGCAGCGGCCTTTTCAGCATCGTGCTCGACGGCGGCGCGATCGCGAGCGTC ACGCCGCAGCCGGCGCGTGT
Product: putative purine catabolism transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; PucR Family Transcriptional Regulator; Transcriptional Regulator PucR Family; CdaR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Regulator Of Polyketide Synthase Expression; Purine Catabolism Regulatory Protein; GAF Sensor Protein
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MSLTISEILQLPGLEELQLRAGERSVQRPVRWYYVAENEGIADWVMGGELVFVTGINHPCDEANLLQLIREGAKSRIAGM VILTGEAFIRRIPDSVVALAEQLEIVLIEQPYLLKMVIVTQLIGTALARHENTLRSQRDIVNQLLTGDYPSIDIAAHRAR NLQLALDRPRRVVALRLAGVPALFEGRDPAAAEALLQDARQTVQRGLDDWLRDEEGALPVVEQGELFVLLLPCDDPRFRK QKLALGALRDALNRQTGPLALFVGISSTVGAARHYCRGLAEARQALGVAEGMRAGQGLCDYSELGVLKLLAAIPDPTLID GFVKETLGNLLDSNRKHPTMLIETLEALLQENGNAIKAAEQLSIHRNTLNHRLRRIETQSGQSLADPYFRLNASVALLAW RMSDTQRQEF
Sequences:
>Translated_410_residues MSLTISEILQLPGLEELQLRAGERSVQRPVRWYYVAENEGIADWVMGGELVFVTGINHPCDEANLLQLIREGAKSRIAGM VILTGEAFIRRIPDSVVALAEQLEIVLIEQPYLLKMVIVTQLIGTALARHENTLRSQRDIVNQLLTGDYPSIDIAAHRAR NLQLALDRPRRVVALRLAGVPALFEGRDPAAAEALLQDARQTVQRGLDDWLRDEEGALPVVEQGELFVLLLPCDDPRFRK QKLALGALRDALNRQTGPLALFVGISSTVGAARHYCRGLAEARQALGVAEGMRAGQGLCDYSELGVLKLLAAIPDPTLID GFVKETLGNLLDSNRKHPTMLIETLEALLQENGNAIKAAEQLSIHRNTLNHRLRRIETQSGQSLADPYFRLNASVALLAW RMSDTQRQEF >Mature_409_residues SLTISEILQLPGLEELQLRAGERSVQRPVRWYYVAENEGIADWVMGGELVFVTGINHPCDEANLLQLIREGAKSRIAGMV ILTGEAFIRRIPDSVVALAEQLEIVLIEQPYLLKMVIVTQLIGTALARHENTLRSQRDIVNQLLTGDYPSIDIAAHRARN LQLALDRPRRVVALRLAGVPALFEGRDPAAAEALLQDARQTVQRGLDDWLRDEEGALPVVEQGELFVLLLPCDDPRFRKQ KLALGALRDALNRQTGPLALFVGISSTVGAARHYCRGLAEARQALGVAEGMRAGQGLCDYSELGVLKLLAAIPDPTLIDG FVKETLGNLLDSNRKHPTMLIETLEALLQENGNAIKAAEQLSIHRNTLNHRLRRIETQSGQSLADPYFRLNASVALLAWR MSDTQRQEF
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45384; Mature: 45253
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTISEILQLPGLEELQLRAGERSVQRPVRWYYVAENEGIADWVMGGELVFVTGINHPC CCCCHHHHHCCCCCHHHHHHCCCHHHCCCEEEEEEECCCCCHHHCCCCCEEEEECCCCCC DEANLLQLIREGAKSRIAGMVILTGEAFIRRIPDSVVALAEQLEIVLIEQPYLLKMVIVT CHHHHHHHHHHHHHHHHCEEEEEECHHHHHHCCHHHHHHHHCCEEEEECCCHHHHHHHHH QLIGTALARHENTLRSQRDIVNQLLTGDYPSIDIAAHRARNLQLALDRPRRVVALRLAGV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCEEEEEEECCC PALFEGRDPAAAEALLQDARQTVQRGLDDWLRDEEGALPVVEQGELFVLLLPCDDPRFRK CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCHHHH QKLALGALRDALNRQTGPLALFVGISSTVGAARHYCRGLAEARQALGVAEGMRAGQGLCD HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YSELGVLKLLAAIPDPTLIDGFVKETLGNLLDSNRKHPTMLIETLEALLQENGNAIKAAE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHH QLSIHRNTLNHRLRRIETQSGQSLADPYFRLNASVALLAWRMSDTQRQEF HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEECCCCHHHCCC >Mature Secondary Structure SLTISEILQLPGLEELQLRAGERSVQRPVRWYYVAENEGIADWVMGGELVFVTGINHPC CCCHHHHHCCCCCHHHHHHCCCHHHCCCEEEEEEECCCCCHHHCCCCCEEEEECCCCCC DEANLLQLIREGAKSRIAGMVILTGEAFIRRIPDSVVALAEQLEIVLIEQPYLLKMVIVT CHHHHHHHHHHHHHHHHCEEEEEECHHHHHHCCHHHHHHHHCCEEEEECCCHHHHHHHHH QLIGTALARHENTLRSQRDIVNQLLTGDYPSIDIAAHRARNLQLALDRPRRVVALRLAGV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCEEEEEEECCC PALFEGRDPAAAEALLQDARQTVQRGLDDWLRDEEGALPVVEQGELFVLLLPCDDPRFRK CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCHHHH QKLALGALRDALNRQTGPLALFVGISSTVGAARHYCRGLAEARQALGVAEGMRAGQGLCD HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YSELGVLKLLAAIPDPTLIDGFVKETLGNLLDSNRKHPTMLIETLEALLQENGNAIKAAE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHH QLSIHRNTLNHRLRRIETQSGQSLADPYFRLNASVALLAWRMSDTQRQEF HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA