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The map label for this gene is codA [H]

Identifier: 126447871

GI number: 126447871

Start: 1761935

End: 1763191

Strand: Reverse

Name: codA [H]

Synonym: BMA10247_A1831

Alternate gene names: 126447871

Gene position: 1763191-1761935 (Counterclockwise)

Preceding gene: 126447330

Following gene: 126446142

Centisome position: 74.94

GC content: 68.02

Gene sequence:

>1257_bases
ATGAAGCTCATCAACGCGACGCTGCGCAAGCGCAGCGGCCTTTTCAGCATCGTGCTCGACGGCGGCGCGATCGCGAGCGT
CACGCCGCAGCCGGCGCGTGTCGACGCGCCGCACGCGCCGCGGGCGGACGTGATCGACGCCGACGGCAAGCTCGTGATCC
CGCCGCTCGTCGAGCCGCACATCCATCTCGACGCGGTGCTGACGGCGGGCGAGCCCGAATGGAACATGAGCGGCACGCTG
TTCGAGGGGATCGAGCGCTGGGCGCAGCGCAAGGCGACGATCACGCACGAGGACACGAAGGCCCGCGCGCATGCGGCGAT
CGGGATGTTGCGCGATCACGGCATTCAGCACGTGCGCACGCACGTCGACGTGACCGACCCTTCGCTCGCGGCGCTGAAGG
CGATGCTCGAGGTGAAGGACGAGGCGCGCGGGCTGATCGATCTGCAGATCGTCGCGTTCCCGCAGGAAGGCATCGAATCG
TTCGGCGGCGGCCGCGCGCTGATGGAGCGGGCAATCGAGGTGGGCGCGGACGTCGTCGGCGGCATTCCGCACTTCGAGAA
CACGCGCGAGCAGGGCGTGAGCTCGATCCGGTTCCTGATGGATCTCGCCGAGCGCAGCGGCTGCCTGGTCGATGTGCACT
GCGACGAGACCGACGATCCGAACTCGCGCTTTCTCGAGGTGCTCGCCGAGGAAGCGCGCGTGCGCGGGATCGGCGCGCGC
GTGACGGCGAGCCATACGACGGCGATGGGCTCGTACGACAATGCGTACTGCTCGAAGCTGTTCCGCTTGCTGAAGCGCTC
GCAGATCAATTTCATCTCGTGCCCGACCGAAAGCATCCATCTGCAAGGCCGCTTCGATACGTTCCCGAAGCGCCGCGGTC
TCACGCGCGTCGCCGAGCTCGATCGCGCCGGCATGAACGTGTGCTTCGGCCAGGATTCGATTCGGGACCCCTGGTATCCG
CTCGGCAACGGCAACATCCTGCGCGCGCTCGATGCGGGGCTGCACATCTGCCACATGATGGGCTATCAGGATCTCGCGCG
CAGCCTCGATTTCGTCACCGAGCACAGCGCGCGCGCGATGCATCTCGGCGAGCGCTACGGCATCGAGCCGGGGCGGCCGG
CGAATCTCGTCGTGCTCGACGCATCCGACGATTACGAGGCGCTGCGGCGGCAGGCGAAGGCGCTGCTGTCGATTCGCGGC
GGCGAAGTGATCATGCGCCGCGTGCCCGAGCGCATCGCGTACCCGGCCGCGCGCTGA

Upstream 100 bases:

>100_bases
CGCAGTCGGGGCAATCGCTCGCCGATCCGTATTTTCGGCTGAACGCATCCGTCGCGCTGCTCGCGTGGCGGATGTCGGAT
ACGCAACGACAGGAGTTCTG

Downstream 100 bases:

>100_bases
CGGGCGGCGGCGGGCGCATGCGGACCGCCGTTCATCGTTCATCGTTCATCGCTCACCGCTCACCGCTCACCGCTCACCGC
GCGCGGCTCGGCCGCGCCGG

Product: cytosine deaminase

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MKLINATLRKRSGLFSIVLDGGAIASVTPQPARVDAPHAPRADVIDADGKLVIPPLVEPHIHLDAVLTAGEPEWNMSGTL
FEGIERWAQRKATITHEDTKARAHAAIGMLRDHGIQHVRTHVDVTDPSLAALKAMLEVKDEARGLIDLQIVAFPQEGIES
FGGGRALMERAIEVGADVVGGIPHFENTREQGVSSIRFLMDLAERSGCLVDVHCDETDDPNSRFLEVLAEEARVRGIGAR
VTASHTTAMGSYDNAYCSKLFRLLKRSQINFISCPTESIHLQGRFDTFPKRRGLTRVAELDRAGMNVCFGQDSIRDPWYP
LGNGNILRALDAGLHICHMMGYQDLARSLDFVTEHSARAMHLGERYGIEPGRPANLVVLDASDDYEALRRQAKALLSIRG
GEVIMRRVPERIAYPAAR

Sequences:

>Translated_418_residues
MKLINATLRKRSGLFSIVLDGGAIASVTPQPARVDAPHAPRADVIDADGKLVIPPLVEPHIHLDAVLTAGEPEWNMSGTL
FEGIERWAQRKATITHEDTKARAHAAIGMLRDHGIQHVRTHVDVTDPSLAALKAMLEVKDEARGLIDLQIVAFPQEGIES
FGGGRALMERAIEVGADVVGGIPHFENTREQGVSSIRFLMDLAERSGCLVDVHCDETDDPNSRFLEVLAEEARVRGIGAR
VTASHTTAMGSYDNAYCSKLFRLLKRSQINFISCPTESIHLQGRFDTFPKRRGLTRVAELDRAGMNVCFGQDSIRDPWYP
LGNGNILRALDAGLHICHMMGYQDLARSLDFVTEHSARAMHLGERYGIEPGRPANLVVLDASDDYEALRRQAKALLSIRG
GEVIMRRVPERIAYPAAR
>Mature_418_residues
MKLINATLRKRSGLFSIVLDGGAIASVTPQPARVDAPHAPRADVIDADGKLVIPPLVEPHIHLDAVLTAGEPEWNMSGTL
FEGIERWAQRKATITHEDTKARAHAAIGMLRDHGIQHVRTHVDVTDPSLAALKAMLEVKDEARGLIDLQIVAFPQEGIES
FGGGRALMERAIEVGADVVGGIPHFENTREQGVSSIRFLMDLAERSGCLVDVHCDETDDPNSRFLEVLAEEARVRGIGAR
VTASHTTAMGSYDNAYCSKLFRLLKRSQINFISCPTESIHLQGRFDTFPKRRGLTRVAELDRAGMNVCFGQDSIRDPWYP
LGNGNILRALDAGLHICHMMGYQDLARSLDFVTEHSARAMHLGERYGIEPGRPANLVVLDASDDYEALRRQAKALLSIRG
GEVIMRRVPERIAYPAAR

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=409, Percent_Identity=55.7457212713936, Blast_Score=461, Evalue=1e-131,
Organism=Escherichia coli, GI1786517, Length=412, Percent_Identity=24.5145631067961, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 45997; Mature: 45997

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLINATLRKRSGLFSIVLDGGAIASVTPQPARVDAPHAPRADVIDADGKLVIPPLVEPH
CCCHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCC
IHLDAVLTAGEPEWNMSGTLFEGIERWAQRKATITHEDTKARAHAAIGMLRDHGIQHVRT
EEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHH
HVDVTDPSLAALKAMLEVKDEARGLIDLQIVAFPQEGIESFGGGRALMERAIEVGADVVG
CCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHCCCCHHHHHHHHHHCHHHHC
GIPHFENTREQGVSSIRFLMDLAERSGCLVDVHCDETDDPNSRFLEVLAEEARVRGIGAR
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCE
VTASHTTAMGSYDNAYCSKLFRLLKRSQINFISCPTESIHLQGRFDTFPKRRGLTRVAEL
EEECCHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHCCHHHHHHH
DRAGMNVCFGQDSIRDPWYPLGNGNILRALDAGLHICHMMGYQDLARSLDFVTEHSARAM
HHCCCEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHH
HLGERYGIEPGRPANLVVLDASDDYEALRRQAKALLSIRGGEVIMRRVPERIAYPAAR
HHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLINATLRKRSGLFSIVLDGGAIASVTPQPARVDAPHAPRADVIDADGKLVIPPLVEPH
CCCHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCC
IHLDAVLTAGEPEWNMSGTLFEGIERWAQRKATITHEDTKARAHAAIGMLRDHGIQHVRT
EEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHH
HVDVTDPSLAALKAMLEVKDEARGLIDLQIVAFPQEGIESFGGGRALMERAIEVGADVVG
CCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHCCCCHHHHHHHHHHCHHHHC
GIPHFENTREQGVSSIRFLMDLAERSGCLVDVHCDETDDPNSRFLEVLAEEARVRGIGAR
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCE
VTASHTTAMGSYDNAYCSKLFRLLKRSQINFISCPTESIHLQGRFDTFPKRRGLTRVAEL
EEECCHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHCCHHHHHHH
DRAGMNVCFGQDSIRDPWYPLGNGNILRALDAGLHICHMMGYQDLARSLDFVTEHSARAM
HHCCCEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHH
HLGERYGIEPGRPANLVVLDASDDYEALRRQAKALLSIRGGEVIMRRVPERIAYPAAR
HHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]