The gene/protein map for NC_009079 is currently unavailable.
Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126446801

Identifier: 126446801

GI number: 126446801

Start: 581799

End: 582326

Strand: Reverse

Name: 126446801

Synonym: BMA10247_A0626

Alternate gene names: NA

Gene position: 582326-581799 (Counterclockwise)

Preceding gene: 126447182

Following gene: 126445934

Centisome position: 24.75

GC content: 76.89

Gene sequence:

>528_bases
ATGAGCGGCCGCCAACAGCGCGCGTTCGAGACGCTGCTCGCGCGGCGCGCGCAGCGCGGCGAGCGGCTGCGCGCCGAGCA
GCGCGTGCTGCGCGCCGAGCGCGACGCCGCGGCGGCCGAGCTCGCGCAGGGCGAAGCGCACGCGCACGCGAAGCGCGACG
CGGCGAACCGGTACGCCGAGCGGGTCGACGCGATGGCGGCCGGCCGCGCGCCGTTCACGATCGGCGATTACGCGGCGTGC
CGCCGCTATCGCGACGCGCTGCTCGACGAGCACGCGCTCGCGAGCGCGCAATGCGCGCGGCTGCGCGCGGCGCTGCAGGC
GAAAGTCGACCGGCTTGCCGCGACCGCGCGCCGGATCGCGCGCAACGACGCGCAGATCGACGTCGTACGCGAGCGGATCC
GGCGGCTCGCACGCGCGGCCGAGGCGGCCGCCGAGGACGCGCAGGACGAGGAAATCGAGGAAGGCGTGCTCGCCCGCCGG
CTCGCGGCGGCGCGGGCATCGAACGCATCGAACGAGACGCACGCATGA

Upstream 100 bases:

>100_bases
CGGTCGCGAAGATCGACCGGATCCGTGCGTTCCTCAACCAGCGCACCGACGAATACTCGCCGCCCGACGCGACGCTCGCC
GCGCTACACGAGCTCGTCCG

Downstream 100 bases:

>100_bases
CGACCTACGACATCTTTGCGCTGCAGCACCTGGGCGACGAATTCATCCGCTTCATCGTGCTGCTCGCGCTGTCGAGCGAG
CGGCTGCTCGTGCTGATGGC

Product: type III secretion protein HrpB7

Products: NA

Alternate protein names: Type III Secretion Protein

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAERVDAMAAGRAPFTIGDYAAC
RRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIARNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARR
LAAARASNASNETHA

Sequences:

>Translated_175_residues
MSGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAERVDAMAAGRAPFTIGDYAAC
RRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIARNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARR
LAAARASNASNETHA
>Mature_174_residues
SGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAERVDAMAAGRAPFTIGDYAACR
RYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIARNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARRL
AAARASNASNETHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19279; Mature: 19148

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVDAMAAGRAPFTIGDYAACRRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARRLAAARASNASNETHA
HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVDAMAAGRAPFTIGDYAACRRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARRLAAARASNASNETHA
HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA