| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446801
Identifier: 126446801
GI number: 126446801
Start: 581799
End: 582326
Strand: Reverse
Name: 126446801
Synonym: BMA10247_A0626
Alternate gene names: NA
Gene position: 582326-581799 (Counterclockwise)
Preceding gene: 126447182
Following gene: 126445934
Centisome position: 24.75
GC content: 76.89
Gene sequence:
>528_bases ATGAGCGGCCGCCAACAGCGCGCGTTCGAGACGCTGCTCGCGCGGCGCGCGCAGCGCGGCGAGCGGCTGCGCGCCGAGCA GCGCGTGCTGCGCGCCGAGCGCGACGCCGCGGCGGCCGAGCTCGCGCAGGGCGAAGCGCACGCGCACGCGAAGCGCGACG CGGCGAACCGGTACGCCGAGCGGGTCGACGCGATGGCGGCCGGCCGCGCGCCGTTCACGATCGGCGATTACGCGGCGTGC CGCCGCTATCGCGACGCGCTGCTCGACGAGCACGCGCTCGCGAGCGCGCAATGCGCGCGGCTGCGCGCGGCGCTGCAGGC GAAAGTCGACCGGCTTGCCGCGACCGCGCGCCGGATCGCGCGCAACGACGCGCAGATCGACGTCGTACGCGAGCGGATCC GGCGGCTCGCACGCGCGGCCGAGGCGGCCGCCGAGGACGCGCAGGACGAGGAAATCGAGGAAGGCGTGCTCGCCCGCCGG CTCGCGGCGGCGCGGGCATCGAACGCATCGAACGAGACGCACGCATGA
Upstream 100 bases:
>100_bases CGGTCGCGAAGATCGACCGGATCCGTGCGTTCCTCAACCAGCGCACCGACGAATACTCGCCGCCCGACGCGACGCTCGCC GCGCTACACGAGCTCGTCCG
Downstream 100 bases:
>100_bases CGACCTACGACATCTTTGCGCTGCAGCACCTGGGCGACGAATTCATCCGCTTCATCGTGCTGCTCGCGCTGTCGAGCGAG CGGCTGCTCGTGCTGATGGC
Product: type III secretion protein HrpB7
Products: NA
Alternate protein names: Type III Secretion Protein
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAERVDAMAAGRAPFTIGDYAAC RRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIARNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARR LAAARASNASNETHA
Sequences:
>Translated_175_residues MSGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAERVDAMAAGRAPFTIGDYAAC RRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIARNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARR LAAARASNASNETHA >Mature_174_residues SGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAERVDAMAAGRAPFTIGDYAACR RYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIARNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARRL AAARASNASNETHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19279; Mature: 19148
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVDAMAAGRAPFTIGDYAACRRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARRLAAARASNASNETHA HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVDAMAAGRAPFTIGDYAACRRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARRLAAARASNASNETHA HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA