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The map label for this gene is yscT [H]

Identifier: 126445934

GI number: 126445934

Start: 580708

End: 581802

Strand: Reverse

Name: yscT [H]

Synonym: BMA10247_A0624

Alternate gene names: 126445934

Gene position: 581802-580708 (Counterclockwise)

Preceding gene: 126446801

Following gene: 126446627

Centisome position: 24.73

GC content: 66.76

Gene sequence:

>1095_bases
ATGACGACCTACGACATCTTTGCGCTGCAGCACCTGGGCGACGAATTCATCCGCTTCATCGTGCTGCTCGCGCTGTCGAG
CGAGCGGCTGCTCGTGCTGATGGCGATCCTGCCGGCGACCGCCGACAACGTGATGAAAGGCCCGATGCGCAGCGGCGCGG
CGGCGGTGTGGTGCCTGTTCGTCGCGGGCGGACAGCAGGCGCTGATTCCGCAGCTCCACGGCGCGTTCCTGATGATCGCC
TGCGTGAAGGAGGCCGTGATCGGGCTCGTGCTCGGCATCGCGGCATCGACGGTATTCTGGGCCGCCGAGGCGATCGGCAC
GTATCTCGACGACGTCGCCGGCTTCAACAACGTGCAGATGCAGAACCCGAGCTCGGGCGCGCAGACCTCGCTGATGGCGA
CGCTGTTCGGGCAACTGACGATCGCGTCGTTCTGGCTGCTGGGCGGCATGACGTTCCTGCTCGGCGCGCTGTACGAATCG
TTCGCCTGGTGGCCGTTCGGATCGTTCGATCCGGTGCCCGCGCCGCTGCTCGAGATGTTCGCGCAGGCGCGCATCGACAT
GCTGATGAACATGATCGCGCGGATCGCGACGCCGATGATGGCGATGCTGTTGCTCGTCGACCTGGGCCTCGCGTTCGTCG
CGCGATCGGCGCAGAAACTCGATCTGATGTCGGTCAGCCAGCCGCTGAAAGGCGCGATCGCGGTGCTGATCGTCGCGGTG
CTGGCGGGGAATTTCGTGAGCGAGATGCGCGGGCAGATTTCGCTCTCGGGACTGGCGCAGCAGATCGGGCGACTCGCGCG
GCAGCCGGCGGGTGGGGTTTCGGGGGTTTCGGGGGTTTCGGGGGTTTCGGGGGTTTCGGGGGTTTCGGGGGTTTCGGGGG
TTTCGGGGGTTTCGGGGGTTTCGGGGGTTTCGGGGGTTTCGGGGGTTTCGGGGGTTTCGGGGGTTTCGGGGGTTTCGGGT
GCTTCGGGTGCTTCGGGTGCTTCGGGCGCTTCGGGCGCTTCGGGCGCTTCGGGCGCTTCGGGCGCTTCGGGCGCTTCGGG
TACGTCAAGCACTTCGAGCACTTGGGACGCCACCAGCGTCACAACCGTCCGCTGA

Upstream 100 bases:

>100_bases
CGGCCGCCGAGGACGCGCAGGACGAGGAAATCGAGGAAGGCGTGCTCGCCCGCCGGCTCGCGGCGGCGCGGGCATCGAAC
GCATCGAACGAGACGCACGC

Downstream 100 bases:

>100_bases
TTCGCCGAATCATGCCGGTGCGCATCGCCTTGTCGGGCGCGCGATCGGCATCGTGCTCGCGAAACCCGCGGCCGAGCGGG
CACGCGAGCCGCCGCGATGC

Product: putative type III secretion inner membrane protein SctT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MTTYDIFALQHLGDEFIRFIVLLALSSERLLVLMAILPATADNVMKGPMRSGAAAVWCLFVAGGQQALIPQLHGAFLMIA
CVKEAVIGLVLGIAASTVFWAAEAIGTYLDDVAGFNNVQMQNPSSGAQTSLMATLFGQLTIASFWLLGGMTFLLGALYES
FAWWPFGSFDPVPAPLLEMFAQARIDMLMNMIARIATPMMAMLLLVDLGLAFVARSAQKLDLMSVSQPLKGAIAVLIVAV
LAGNFVSEMRGQISLSGLAQQIGRLARQPAGGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSG
ASGASGASGASGASGASGASGASGASGTSSTSSTWDATSVTTVR

Sequences:

>Translated_364_residues
MTTYDIFALQHLGDEFIRFIVLLALSSERLLVLMAILPATADNVMKGPMRSGAAAVWCLFVAGGQQALIPQLHGAFLMIA
CVKEAVIGLVLGIAASTVFWAAEAIGTYLDDVAGFNNVQMQNPSSGAQTSLMATLFGQLTIASFWLLGGMTFLLGALYES
FAWWPFGSFDPVPAPLLEMFAQARIDMLMNMIARIATPMMAMLLLVDLGLAFVARSAQKLDLMSVSQPLKGAIAVLIVAV
LAGNFVSEMRGQISLSGLAQQIGRLARQPAGGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSG
ASGASGASGASGASGASGASGASGASGTSSTSSTWDATSVTTVR
>Mature_363_residues
TTYDIFALQHLGDEFIRFIVLLALSSERLLVLMAILPATADNVMKGPMRSGAAAVWCLFVAGGQQALIPQLHGAFLMIAC
VKEAVIGLVLGIAASTVFWAAEAIGTYLDDVAGFNNVQMQNPSSGAQTSLMATLFGQLTIASFWLLGGMTFLLGALYESF
AWWPFGSFDPVPAPLLEMFAQARIDMLMNMIARIATPMMAMLLLVDLGLAFVARSAQKLDLMSVSQPLKGAIAVLIVAVL
AGNFVSEMRGQISLSGLAQQIGRLARQPAGGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGVSGA
SGASGASGASGASGASGASGASGASGTSSTSSTWDATSVTTVR

Specific function: Component of the yop secretion machinery [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 36586; Mature: 36455

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECC
>Mature Secondary Structure 
TTYDIFALQHLGDEFIRFIVLLALSSERLLVLMAILPATADNVMKGPMRSGAAAVWCLF
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VAGGQQALIPQLHGAFLMIACVKEAVIGLVLGIAASTVFWAAEAIGTYLDDVAGFNNVQM
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
QNPSSGAQTSLMATLFGQLTIASFWLLGGMTFLLGALYESFAWWPFGSFDPVPAPLLEMF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
AQARIDMLMNMIARIATPMMAMLLLVDLGLAFVARSAQKLDLMSVSQPLKGAIAVLIVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGNFVSEMRGQISLSGLAQQIGRLARQPAGGVSGVSGVSGVSGVSGVSGVSGVSGVSGV
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGVSGVSGVSGVSGVSGVSGASGASGASGASGASGASGASGASGASGTSSTSSTWDATSV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTVR
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]