| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is kefB [H]
Identifier: 126454989
GI number: 126454989
Start: 570612
End: 572621
Strand: Direct
Name: kefB [H]
Synonym: BURPS1106A_0603
Alternate gene names: 126454989
Gene position: 570612-572621 (Clockwise)
Preceding gene: 126454675
Following gene: 126455354
Centisome position: 14.31
GC content: 69.2
Gene sequence:
>2010_bases GTGATTTCCCCGCTCGAAATGACGCTTCTGCTGCTGCTTGCCTCGGTGGTGGGCGTCGTCGTGTTCCGTTCGCTGAACCT GCCGCCGATGCTCGGCTATCTGACGGTCGGCATCCTGGTCGGTCCGCATGCGCTCGGCTTCGCGGCCGACCTCGAGCGCG CCGAGCATCTCGCCGAGTTCGGCGTCGTGTTCCTGATGTTCTCGATCGGCCTCGAGTTCTCGTTGTCGAAGCTGCGCGCG ATGCGCCGGCTCGTGTTCGGGCTCGGGCTCGCGCAGGTGCTCGGCACGATCGCGATCGCGCTCGTGCTGGGCGCGCTCTT CGAGCGCTGGATGCACATCACGTGGGAAGGCAGCGTCGCGCTCGGCGGCGCGCTCGCGATGTCGTCCACCGCGATCGTCT CGAAAATGCTCGCCGAGCGGCTCGAGATCGAGACCGAGCACGGCCGCAACATCTTCGGCGTGCTGCTGTTCCAGGATCTC GCCGTCGTGCCGCTGCTCATCGTGATCGCCGCGTTCGGCGGCGAATCGTCGAAGGATCTCGCGATGTCGCTCGGGTTCGC GGCGGTGAAGATCGTCGTCGCGCTCGCGCTGCTGCTGATCGTCGGCCAGCGCTTCATGACGCGCTGGCTGAACGTCGTCG CGCGGCGGCGCTCGCAGGAGCTGTTCGTGCTGAACCTGCTGCTCGTCACGCTCGGCGCCGCGTTCATCACCGACCGCTTC GGCCTGTCGCTCGCGCTCGGCGCGTTCATCGCCGGGATGCTGATCTCCGAGACGCCGTATCGGCATCAGGTGGAAGAGGA CATCAAGCCGTTTCGCGACGTGCTGCTTGGCCTGTTCTTCGTGACGACCGGGATGCTGCTCGATCCGAGCGTGATCTGGC GGCATCCGTTGCTCGTGCTCGCGTTCTTCGTGGGCCAGGTGCTGCTCAAGAGCGTGATGATCACGGGGCTCGCGCGCGCG TTCGGCGCGACGCCCGGCGTCGCGATGCGCACGGGGCTCGGGCTCGCGCAGGCGGGCGAGTTCGGCTTCGTGCTCCTGAA CCTGATTCTCGACCGGCATCTCGTCGACGCGACGCTGTTGCAGTCGATCCTCGCTTCGATGCTGCTGTCGATGCTCGCCG CGCCGTTCCTGATCCAGAACGCGGATCGCATCGTGATGCGGCTGTCCGCCGCGGAATGGATGCAGCAGTCGCTGCAGATG ACGCGCATCGCGACGCAGAGCATCAAGCAGAAGGGCCACGTGATCATCTGCGGCTACGGCCGCGCCGGGCAGAACCTCGC GCGGATGCTCGAGCAGGAGGGGATCGCGTACGTCGCGCTCGATCTCGATCCGGACCGCGTGGCGGCCGCGGCGGCGGCGG GCGAATCGGTCGTGTTCGGCGACGCCGCGCGCCGCGAATCGCTGCTCGCGGCGGGCATCCATCGCGCGGCGGCGGTGGCC GTCACCTACGCGAACACGCCGTCCGCGTTGCGCGTGCTGCACAACGTGCACGAGCTCGAGCCGACGCTGCCCGCGATCGT GCGCACCGTCGACGACGCCGATCTCGAGAAGCTGCTCGCCGCGGGCGCGACCGAGGTGATTCCGGAGATCGTCGAGGGCA GCCTGATGCTCGCGTCGCACACGCTCGTGCTGATGGGCGTGCCGATGCGGCGCGTCGTGCGGCGCGTCGAGGAGATGCGC GACGCGCGCTACAGCCTGCTGCGCGGCTACTTCCACGGCGCCGACGACGCGGACGACGACGACCACGAGCAGGTGCGGCT ACAATCGGTGCCCGTCGACGCGCGCGCGGACGCGGTCGGCCGCTCGCTCTCCGAGCTGGGGCTGTTCGCGCTCGGCCTGG AGGTGACGGCGATTCGCCGGCATGGGATTCGCGGCGTCGAACCCGACCCCGAGACGAAGCTGCGCGCGAGCGACATCGTC GTGCTGCGCGGGTTGCCCGAGGCGCTCGCCCAGGCCGAGGAGCGGCTGTCGCGGCATCGGCGCGAAGGCGGATCGGCCGC GGTGGCGTGA
Upstream 100 bases:
>100_bases CGCCGCGCCGGGCCCCTTGCGCCCACCTTTTCCGAGTAGTCTCCCGGCCCACCCCGGCGTCCGTTGCGCGGCGCCGTCGA CGAACGAGGACGCTTCGCCC
Downstream 100 bases:
>100_bases CGCCGGGCGGCCGCCGCTTGTTCAGTTGTCGAGCGATCGACGAACGGCGCGAGATTGCAGCGCCGTTTTTTTTTGGAGAG TTTCATGATGTCCACGTCGG
Product: monovalent cation:proton antiporter-2 (CPA2) family protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 669; Mature: 669
Protein sequence:
>669_residues MISPLEMTLLLLLASVVGVVVFRSLNLPPMLGYLTVGILVGPHALGFAADLERAEHLAEFGVVFLMFSIGLEFSLSKLRA MRRLVFGLGLAQVLGTIAIALVLGALFERWMHITWEGSVALGGALAMSSTAIVSKMLAERLEIETEHGRNIFGVLLFQDL AVVPLLIVIAAFGGESSKDLAMSLGFAAVKIVVALALLLIVGQRFMTRWLNVVARRRSQELFVLNLLLVTLGAAFITDRF GLSLALGAFIAGMLISETPYRHQVEEDIKPFRDVLLGLFFVTTGMLLDPSVIWRHPLLVLAFFVGQVLLKSVMITGLARA FGATPGVAMRTGLGLAQAGEFGFVLLNLILDRHLVDATLLQSILASMLLSMLAAPFLIQNADRIVMRLSAAEWMQQSLQM TRIATQSIKQKGHVIICGYGRAGQNLARMLEQEGIAYVALDLDPDRVAAAAAAGESVVFGDAARRESLLAAGIHRAAAVA VTYANTPSALRVLHNVHELEPTLPAIVRTVDDADLEKLLAAGATEVIPEIVEGSLMLASHTLVLMGVPMRRVVRRVEEMR DARYSLLRGYFHGADDADDDDHEQVRLQSVPVDARADAVGRSLSELGLFALGLEVTAIRRHGIRGVEPDPETKLRASDIV VLRGLPEALAQAEERLSRHRREGGSAAVA
Sequences:
>Translated_669_residues MISPLEMTLLLLLASVVGVVVFRSLNLPPMLGYLTVGILVGPHALGFAADLERAEHLAEFGVVFLMFSIGLEFSLSKLRA MRRLVFGLGLAQVLGTIAIALVLGALFERWMHITWEGSVALGGALAMSSTAIVSKMLAERLEIETEHGRNIFGVLLFQDL AVVPLLIVIAAFGGESSKDLAMSLGFAAVKIVVALALLLIVGQRFMTRWLNVVARRRSQELFVLNLLLVTLGAAFITDRF GLSLALGAFIAGMLISETPYRHQVEEDIKPFRDVLLGLFFVTTGMLLDPSVIWRHPLLVLAFFVGQVLLKSVMITGLARA FGATPGVAMRTGLGLAQAGEFGFVLLNLILDRHLVDATLLQSILASMLLSMLAAPFLIQNADRIVMRLSAAEWMQQSLQM TRIATQSIKQKGHVIICGYGRAGQNLARMLEQEGIAYVALDLDPDRVAAAAAAGESVVFGDAARRESLLAAGIHRAAAVA VTYANTPSALRVLHNVHELEPTLPAIVRTVDDADLEKLLAAGATEVIPEIVEGSLMLASHTLVLMGVPMRRVVRRVEEMR DARYSLLRGYFHGADDADDDDHEQVRLQSVPVDARADAVGRSLSELGLFALGLEVTAIRRHGIRGVEPDPETKLRASDIV VLRGLPEALAQAEERLSRHRREGGSAAVA >Mature_669_residues MISPLEMTLLLLLASVVGVVVFRSLNLPPMLGYLTVGILVGPHALGFAADLERAEHLAEFGVVFLMFSIGLEFSLSKLRA MRRLVFGLGLAQVLGTIAIALVLGALFERWMHITWEGSVALGGALAMSSTAIVSKMLAERLEIETEHGRNIFGVLLFQDL AVVPLLIVIAAFGGESSKDLAMSLGFAAVKIVVALALLLIVGQRFMTRWLNVVARRRSQELFVLNLLLVTLGAAFITDRF GLSLALGAFIAGMLISETPYRHQVEEDIKPFRDVLLGLFFVTTGMLLDPSVIWRHPLLVLAFFVGQVLLKSVMITGLARA FGATPGVAMRTGLGLAQAGEFGFVLLNLILDRHLVDATLLQSILASMLLSMLAAPFLIQNADRIVMRLSAAEWMQQSLQM TRIATQSIKQKGHVIICGYGRAGQNLARMLEQEGIAYVALDLDPDRVAAAAAAGESVVFGDAARRESLLAAGIHRAAAVA VTYANTPSALRVLHNVHELEPTLPAIVRTVDDADLEKLLAAGATEVIPEIVEGSLMLASHTLVLMGVPMRRVVRRVEEMR DARYSLLRGYFHGADDADDDDHEQVRLQSVPVDARADAVGRSLSELGLFALGLEVTAIRRHGIRGVEPDPETKLRASDIV VLRGLPEALAQAEERLSRHRREGGSAAVA
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=344, Percent_Identity=28.4883720930233, Blast_Score=104, Evalue=3e-22, Organism=Escherichia coli, GI1789749, Length=562, Percent_Identity=33.4519572953737, Blast_Score=249, Evalue=5e-67, Organism=Escherichia coli, GI1786232, Length=622, Percent_Identity=31.0289389067524, Blast_Score=247, Evalue=2e-66, Organism=Escherichia coli, GI1786685, Length=534, Percent_Identity=30.5243445692884, Blast_Score=206, Evalue=4e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 72296; Mature: 72296
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISPLEMTLLLLLASVVGVVVFRSLNLPPMLGYLTVGILVGPHALGFAADLERAEHLAEF CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GVVFLMFSIGLEFSLSKLRAMRRLVFGLGLAQVLGTIAIALVLGALFERWMHITWEGSVA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEE LGGALAMSSTAIVSKMLAERLEIETEHGRNIFGVLLFQDLAVVPLLIVIAAFGGESSKDL ECHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH AMSLGFAAVKIVVALALLLIVGQRFMTRWLNVVARRRSQELFVLNLLLVTLGAAFITDRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GLSLALGAFIAGMLISETPYRHQVEEDIKPFRDVLLGLFFVTTGMLLDPSVIWRHPLLVL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AFFVGQVLLKSVMITGLARAFGATPGVAMRTGLGLAQAGEFGFVLLNLILDRHLVDATLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHH QSILASMLLSMLAAPFLIQNADRIVMRLSAAEWMQQSLQMTRIATQSIKQKGHVIICGYG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC RAGQNLARMLEQEGIAYVALDLDPDRVAAAAAAGESVVFGDAARRESLLAAGIHRAAAVA CCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHEE VTYANTPSALRVLHNVHELEPTLPAIVRTVDDADLEKLLAAGATEVIPEIVEGSLMLASH EEECCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHH TLVLMGVPMRRVVRRVEEMRDARYSLLRGYFHGADDADDDDHEQVRLQSVPVDARADAVG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEHHCCCCCHHHHHHH RSLSELGLFALGLEVTAIRRHGIRGVEPDPETKLRASDIVVLRGLPEALAQAEERLSRHR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH REGGSAAVA HCCCCCCCC >Mature Secondary Structure MISPLEMTLLLLLASVVGVVVFRSLNLPPMLGYLTVGILVGPHALGFAADLERAEHLAEF CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GVVFLMFSIGLEFSLSKLRAMRRLVFGLGLAQVLGTIAIALVLGALFERWMHITWEGSVA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEE LGGALAMSSTAIVSKMLAERLEIETEHGRNIFGVLLFQDLAVVPLLIVIAAFGGESSKDL ECHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH AMSLGFAAVKIVVALALLLIVGQRFMTRWLNVVARRRSQELFVLNLLLVTLGAAFITDRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GLSLALGAFIAGMLISETPYRHQVEEDIKPFRDVLLGLFFVTTGMLLDPSVIWRHPLLVL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AFFVGQVLLKSVMITGLARAFGATPGVAMRTGLGLAQAGEFGFVLLNLILDRHLVDATLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHH QSILASMLLSMLAAPFLIQNADRIVMRLSAAEWMQQSLQMTRIATQSIKQKGHVIICGYG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC RAGQNLARMLEQEGIAYVALDLDPDRVAAAAAAGESVVFGDAARRESLLAAGIHRAAAVA CCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHEE VTYANTPSALRVLHNVHELEPTLPAIVRTVDDADLEKLLAAGATEVIPEIVEGSLMLASH EEECCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHH TLVLMGVPMRRVVRRVEEMRDARYSLLRGYFHGADDADDDDHEQVRLQSVPVDARADAVG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEHHCCCCCHHHHHHH RSLSELGLFALGLEVTAIRRHGIRGVEPDPETKLRASDIVVLRGLPEALAQAEERLSRHR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH REGGSAAVA HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA