| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is apt [H]
Identifier: 126455354
GI number: 126455354
Start: 572676
End: 573269
Strand: Direct
Name: apt [H]
Synonym: BURPS1106A_0604
Alternate gene names: 126455354
Gene position: 572676-573269 (Clockwise)
Preceding gene: 126454989
Following gene: 126452184
Centisome position: 14.36
GC content: 66.33
Gene sequence:
>594_bases TTGCAGCGCCGTTTTTTTTTGGAGAGTTTCATGATGTCCACGTCGGACGCGCCGCTCGATCCCGTCGAGTTCATTCACAG CCGCATCCGCACGGTGCCGGACTGGCCGCAGCCCGGCGTGATGTTTCGCGACATCACGCCGCTGCTGCAAAGCGCGAAGG CGTTGCGCGTGCTCGTCGACCTGTTCGTCGAGCGCTATGTCGACGCGAAGCTCGACTACATCGCGGGCCTCGATGCGCGC GGCTTCATCATCGCGCCGATCGTCGCGTACGAGCTGTCCGTCGGCTTCGTGCCGATCCGCAAGGTCGGCAAGCTGCCGTA CGCGACGCAGCGCGAATCGTATGCGCTCGAGTACGGCACCGCGACCGTCGAGATTCACGAGGACGCGTGCAAGCCGGGCG ATCGCGTCGTGATCGTCGACGATCTGATCGCGACGGGCGGCACGATGATGGCGGGCAAGAACCTGCTCGAGCGGCTGGGC GCCGTCGTCGTCGAAGGCGCGGCGATCGTCGATCTGCCGGATCTCGGCGGCTCGGCGCTGCTGCGCGGAGCCGGCCTGCC GCTCTACACGGTCACCGAATTCCCCGGGCACTGA
Upstream 100 bases:
>100_bases GCTGTCGCGGCATCGGCGCGAAGGCGGATCGGCCGCGGTGGCGTGACGCCGGGCGGCCGCCGCTTGTTCAGTTGTCGAGC GATCGACGAACGGCGCGAGA
Downstream 100 bases:
>100_bases GCGCGCCGACCGCGCGCCGGCCGCCGTGCCCGGTTTCGTGCCGCGCCTGCACCGGGCGCGGTCCATTCAGCCACCGATTC AAGCGAGCCCACGATGCCGA
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT [H]
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MQRRFFLESFMMSTSDAPLDPVEFIHSRIRTVPDWPQPGVMFRDITPLLQSAKALRVLVDLFVERYVDAKLDYIAGLDAR GFIIAPIVAYELSVGFVPIRKVGKLPYATQRESYALEYGTATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKNLLERLG AVVVEGAAIVDLPDLGGSALLRGAGLPLYTVTEFPGH
Sequences:
>Translated_197_residues MQRRFFLESFMMSTSDAPLDPVEFIHSRIRTVPDWPQPGVMFRDITPLLQSAKALRVLVDLFVERYVDAKLDYIAGLDAR GFIIAPIVAYELSVGFVPIRKVGKLPYATQRESYALEYGTATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKNLLERLG AVVVEGAAIVDLPDLGGSALLRGAGLPLYTVTEFPGH >Mature_197_residues MQRRFFLESFMMSTSDAPLDPVEFIHSRIRTVPDWPQPGVMFRDITPLLQSAKALRVLVDLFVERYVDAKLDYIAGLDAR GFIIAPIVAYELSVGFVPIRKVGKLPYATQRESYALEYGTATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKNLLERLG AVVVEGAAIVDLPDLGGSALLRGAGLPLYTVTEFPGH
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4502171, Length=177, Percent_Identity=47.4576271186441, Blast_Score=156, Evalue=1e-38, Organism=Homo sapiens, GI71773201, Length=129, Percent_Identity=51.1627906976744, Blast_Score=131, Evalue=5e-31, Organism=Escherichia coli, GI1786675, Length=176, Percent_Identity=49.4318181818182, Blast_Score=180, Evalue=7e-47, Organism=Caenorhabditis elegans, GI17509087, Length=159, Percent_Identity=44.6540880503145, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6323619, Length=167, Percent_Identity=37.7245508982036, Blast_Score=110, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6320649, Length=171, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=3e-17, Organism=Drosophila melanogaster, GI17136334, Length=174, Percent_Identity=40.8045977011494, Blast_Score=129, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005764 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.7 [H]
Molecular weight: Translated: 21551; Mature: 21551
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRFFLESFMMSTSDAPLDPVEFIHSRIRTVPDWPQPGVMFRDITPLLQSAKALRVLVD CCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LFVERYVDAKLDYIAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYATQRESYALEYGT HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCEEHHHHCCCCCCCCCCCEEEEECC ATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKNLLERLGAVVVEGAAIVDLPDLGGSAL EEEEECCCCCCCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH LRGAGLPLYTVTEFPGH HHCCCCCEEEECCCCCC >Mature Secondary Structure MQRRFFLESFMMSTSDAPLDPVEFIHSRIRTVPDWPQPGVMFRDITPLLQSAKALRVLVD CCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LFVERYVDAKLDYIAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYATQRESYALEYGT HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCEEHHHHCCCCCCCCCCCEEEEECC ATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKNLLERLGAVVVEGAAIVDLPDLGGSAL EEEEECCCCCCCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH LRGAGLPLYTVTEFPGH HHCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA