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The map label for this gene is petA [H]

Identifier: 126454818

GI number: 126454818

Start: 3624757

End: 3625377

Strand: Reverse

Name: petA [H]

Synonym: BURPS1106A_3707

Alternate gene names: 126454818

Gene position: 3625377-3624757 (Counterclockwise)

Preceding gene: 126451667

Following gene: 126453900

Centisome position: 90.9

GC content: 65.54

Gene sequence:

>621_bases
ATGCGAGACAAAGAAGAGGAACACGTCGACAGCGGCCGCCGGACATGGCTGATTGCGACATCGGTTGCGGGCGGCGTTGG
TGGCGTCGCAACCGTGATACCTTTCGCGGCGTCGTTGGCGCCGTCCACCAAGGCAAAGGCGGCCGGCGCGCCCGTCGAAG
TCGACATCGGCGCGCTCAAGCCCGGCGAGATGCTCACGGTGCCGTGGCGCGGCAAGCCGGTGTGGGTGCTGAACCGCACC
GATGCGATGCTCGCCGACGTCGTCAAGGCGGACAAGGAAGTCGCCGATCCGCAGTCGAAATCGCCGTACTCGATGCCGTT
GCCCGAGTATTGCGCGAACGAATACCGGTCGAGAGCCGACCGCAAGAACATCCTGGTCGTGATGGCGGTGTGCACGCACC
TCGGCTGCACGCCGAGCCAGCGTTTCACGCCCGGGCCGCAGCCGAACCTGCCCGACGACTGGCCGGGCGGCTTCCTCTGC
CCGTGCCACGGTTCGACCTACGATCTCGCCGGACGGGTCTTCAAGAACAAGCCGGCTCCGCAGAATCTGGACGTCCCGCC
ATACATGTTCACGTCGGCCACGACGCTCGTGATCGGCAAGGACGAGAAAGGAGAAGCGTAA

Upstream 100 bases:

>100_bases
TATTTAACGTCCGGGTCTTGTAAATGCCGACTCCATTCGAGCAAACTAGCGGCGGTGTGAAATGTCGTGACGGATATCCA
ACTCAGAATTGGGGCGTGTG

Downstream 100 bases:

>100_bases
ATGGCGACCGATAACAAAGAGATCTCCACAACAGGCTTGCTCGGCTGGGTCGACCGGCGCTTTCCCCTCACTTCCACGTG
GAAGCAGCATCTTTCCGAGT

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MRDKEEEHVDSGRRTWLIATSVAGGVGGVATVIPFAASLAPSTKAKAAGAPVEVDIGALKPGEMLTVPWRGKPVWVLNRT
DAMLADVVKADKEVADPQSKSPYSMPLPEYCANEYRSRADRKNILVVMAVCTHLGCTPSQRFTPGPQPNLPDDWPGGFLC
PCHGSTYDLAGRVFKNKPAPQNLDVPPYMFTSATTLVIGKDEKGEA

Sequences:

>Translated_206_residues
MRDKEEEHVDSGRRTWLIATSVAGGVGGVATVIPFAASLAPSTKAKAAGAPVEVDIGALKPGEMLTVPWRGKPVWVLNRT
DAMLADVVKADKEVADPQSKSPYSMPLPEYCANEYRSRADRKNILVVMAVCTHLGCTPSQRFTPGPQPNLPDDWPGGFLC
PCHGSTYDLAGRVFKNKPAPQNLDVPPYMFTSATTLVIGKDEKGEA
>Mature_206_residues
MRDKEEEHVDSGRRTWLIATSVAGGVGGVATVIPFAASLAPSTKAKAAGAPVEVDIGALKPGEMLTVPWRGKPVWVLNRT
DAMLADVVKADKEVADPQSKSPYSMPLPEYCANEYRSRADRKNILVVMAVCTHLGCTPSQRFTPGPQPNLPDDWPGGFLC
PCHGSTYDLAGRVFKNKPAPQNLDVPPYMFTSATTLVIGKDEKGEA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=188, Percent_Identity=30.3191489361702, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17540418, Length=206, Percent_Identity=35.9223300970874, Blast_Score=91, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6320811, Length=198, Percent_Identity=31.8181818181818, Blast_Score=92, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24580896, Length=168, Percent_Identity=35.1190476190476, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 22120; Mature: 22120

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDKEEEHVDSGRRTWLIATSVAGGVGGVATVIPFAASLAPSTKAKAAGAPVEVDIGALK
CCCCCHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCEEEEECCCC
PGEMLTVPWRGKPVWVLNRTDAMLADVVKADKEVADPQSKSPYSMPLPEYCANEYRSRAD
CCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
RKNILVVMAVCTHLGCTPSQRFTPGPQPNLPDDWPGGFLCPCHGSTYDLAGRVFKNKPAP
CCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCC
QNLDVPPYMFTSATTLVIGKDEKGEA
CCCCCCCEEECCCEEEEEECCCCCCC
>Mature Secondary Structure
MRDKEEEHVDSGRRTWLIATSVAGGVGGVATVIPFAASLAPSTKAKAAGAPVEVDIGALK
CCCCCHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCEEEEECCCC
PGEMLTVPWRGKPVWVLNRTDAMLADVVKADKEVADPQSKSPYSMPLPEYCANEYRSRAD
CCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
RKNILVVMAVCTHLGCTPSQRFTPGPQPNLPDDWPGGFLCPCHGSTYDLAGRVFKNKPAP
CCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCC
QNLDVPPYMFTSATTLVIGKDEKGEA
CCCCCCCEEECCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA