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The map label for this gene is ydeR [H]

Identifier: 126454719

GI number: 126454719

Start: 3762259

End: 3763587

Strand: Direct

Name: ydeR [H]

Synonym: BURPS1106A_3860

Alternate gene names: 126454719

Gene position: 3762259-3763587 (Clockwise)

Preceding gene: 126452380

Following gene: 126453915

Centisome position: 94.33

GC content: 74.94

Gene sequence:

>1329_bases
TTGTCGCATAACAAGCGCATCTCTACGATAGGAGCTCGTTCGTTTCCCGAGATCCTTTCGATGAACTGCCCTGCCGATCT
TCGCACCGGCCCGGCCGCCGGCCGACCGCGCACCGCTCCCGCCCCGGCGCTCACGCCCGCGCTCACCATGTTCTTCTCGG
CGACGGTCGGCGTGATCGTGCTCAACCTGTTCGCCGCGCAGCCGCTGACGGGCCCGATCGCGGCCGAACTGCGGCTGCCC
GCCAGTCTGACGGGGCTCGTCGCGATGCTGCCGCAGCTCGGCTACGCGGCGGGCCTCGTGCTGCTCGTCCCGCTCGTCGA
CCTGCTCGAAAACCGCCGGCTCATCGTGACGACGCTCGCCGTCTGTGCGGCGACGCTCGCGCTGCCCGCCGTCACGCGCT
CCGGCGCCGTGTACCTCGCGGCGGTGTTCGCCGCCGGGGCGGCGTCGAGCGTGATTCAGATGCTGGTGCCGATGGCGGCG
TCGATGGCCCCCGACGAACGGCGCGGCCGCGCGGTCGGCAACGTGATGAGCGGCCTGATGCTCGGCATCCTGCTGTCGCG
GCCGCTCGCGAGCCTGATCGCCGGCGCGGCCGGCTGGCGCGCGTTCTATGGCGCGGCCGCGGCCGCCGATATCGCGATCG
CCGCGGTGCTCGCCGCGAAGCTGCCGCTGCGCGCGCCGCAGCTGTCGACCCGCTACGCGGCGCTGCTCCGCTCGCTCTGG
ACGCTCGTCGCGACCGAGCGCGTGCTGCAGCGGCGCGCGCTGTCCGCGGCGCTGTCGATGGCCGCGTTCAGCGCGTTCTG
GACCGCGATCGGCCTGCGTCTCGCCGCCGCGCCGTTCGATCTCGGCCTGCACGGCATCGCGATGTTCGCGTTCGCCGGCG
CCACCGGTGCGATCGTCACGCCGTTCGCGGGCCTGGCCGGCGACCGCGGCCGGGAGCGCGACGCGCTGCGCGGCGCGCAC
GTAGCGATGCTCGCCGCGTTGGCTGCGCTCGGCGTCGCGGGGGCCGGCTGGGGCGGATTCGACGCGGCCGCGCATCCGGC
GCTCGCGCTCGCGCTGCTCGTCGCCGGTGCGGCGGCGCTCGACGCGGGCGTCGTCGCCGATCAGACGCTCGGCCGGCGCG
CGATCAATCTGCTCGATCCCGCCATGCGCGGGCGGCTCAACGGGCTCTTCGTCGGCCTGTTCTTCGTCGGCGGCTCGCTC
GGCGCCGTGCTCGCCGGCGCGGCATGGGCCTGGGCGGGCTGGGGCGCGGTGTGCGCGGTAGGGCTCGTGTTTGCGGGCGC
CGCGTTCGCGCTGGACTGGATCGGCGCGCACGGGCCGGCGCCCCGCTGA

Upstream 100 bases:

>100_bases
GCGGCGGCCACCATCGAGCCGCTGTCGACGACCGCCACGAAAGCTTGAAGATCACGCGTATTCAAAACAAACTCGCATAA
TCATATTGAACATATTTCAA

Downstream 100 bases:

>100_bases
AACGACGACGCCCCGCGCCGTCACCGACGCGGGGCGTTTCATTCGCTCATGCGGCGCGGCGGGGCGCGCCGAGCCTGCCG
CGCGCGTGTTTCAGTGCCGC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSHNKRISTIGARSFPEILSMNCPADLRTGPAAGRPRTAPAPALTPALTMFFSATVGVIVLNLFAAQPLTGPIAAELRLP
ASLTGLVAMLPQLGYAAGLVLLVPLVDLLENRRLIVTTLAVCAATLALPAVTRSGAVYLAAVFAAGAASSVIQMLVPMAA
SMAPDERRGRAVGNVMSGLMLGILLSRPLASLIAGAAGWRAFYGAAAAADIAIAAVLAAKLPLRAPQLSTRYAALLRSLW
TLVATERVLQRRALSAALSMAAFSAFWTAIGLRLAAAPFDLGLHGIAMFAFAGATGAIVTPFAGLAGDRGRERDALRGAH
VAMLAALAALGVAGAGWGGFDAAAHPALALALLVAGAAALDAGVVADQTLGRRAINLLDPAMRGRLNGLFVGLFFVGGSL
GAVLAGAAWAWAGWGAVCAVGLVFAGAAFALDWIGAHGPAPR

Sequences:

>Translated_442_residues
MSHNKRISTIGARSFPEILSMNCPADLRTGPAAGRPRTAPAPALTPALTMFFSATVGVIVLNLFAAQPLTGPIAAELRLP
ASLTGLVAMLPQLGYAAGLVLLVPLVDLLENRRLIVTTLAVCAATLALPAVTRSGAVYLAAVFAAGAASSVIQMLVPMAA
SMAPDERRGRAVGNVMSGLMLGILLSRPLASLIAGAAGWRAFYGAAAAADIAIAAVLAAKLPLRAPQLSTRYAALLRSLW
TLVATERVLQRRALSAALSMAAFSAFWTAIGLRLAAAPFDLGLHGIAMFAFAGATGAIVTPFAGLAGDRGRERDALRGAH
VAMLAALAALGVAGAGWGGFDAAAHPALALALLVAGAAALDAGVVADQTLGRRAINLLDPAMRGRLNGLFVGLFFVGGSL
GAVLAGAAWAWAGWGAVCAVGLVFAGAAFALDWIGAHGPAPR
>Mature_441_residues
SHNKRISTIGARSFPEILSMNCPADLRTGPAAGRPRTAPAPALTPALTMFFSATVGVIVLNLFAAQPLTGPIAAELRLPA
SLTGLVAMLPQLGYAAGLVLLVPLVDLLENRRLIVTTLAVCAATLALPAVTRSGAVYLAAVFAAGAASSVIQMLVPMAAS
MAPDERRGRAVGNVMSGLMLGILLSRPLASLIAGAAGWRAFYGAAAAADIAIAAVLAAKLPLRAPQLSTRYAALLRSLWT
LVATERVLQRRALSAALSMAAFSAFWTAIGLRLAAAPFDLGLHGIAMFAFAGATGAIVTPFAGLAGDRGRERDALRGAHV
AMLAALAALGVAGAGWGGFDAAAHPALALALLVAGAAALDAGVVADQTLGRRAINLLDPAMRGRLNGLFVGLFFVGGSLG
AVLAGAAWAWAGWGAVCAVGLVFAGAAFALDWIGAHGPAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44650; Mature: 44519

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHNKRISTIGARSFPEILSMNCPADLRTGPAAGRPRTAPAPALTPALTMFFSATVGVIV
CCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LNLFAAQPLTGPIAAELRLPASLTGLVAMLPQLGYAAGLVLLVPLVDLLENRRLIVTTLA
HHHHHCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VCAATLALPAVTRSGAVYLAAVFAAGAASSVIQMLVPMAASMAPDERRGRAVGNVMSGLM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LGILLSRPLASLIAGAAGWRAFYGAAAAADIAIAAVLAAKLPLRAPQLSTRYAALLRSLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
TLVATERVLQRRALSAALSMAAFSAFWTAIGLRLAAAPFDLGLHGIAMFAFAGATGAIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHH
PFAGLAGDRGRERDALRGAHVAMLAALAALGVAGAGWGGFDAAAHPALALALLVAGAAAL
CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DAGVVADQTLGRRAINLLDPAMRGRLNGLFVGLFFVGGSLGAVLAGAAWAWAGWGAVCAV
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVFAGAAFALDWIGAHGPAPR
HHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SHNKRISTIGARSFPEILSMNCPADLRTGPAAGRPRTAPAPALTPALTMFFSATVGVIV
CCCCCCHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LNLFAAQPLTGPIAAELRLPASLTGLVAMLPQLGYAAGLVLLVPLVDLLENRRLIVTTLA
HHHHHCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VCAATLALPAVTRSGAVYLAAVFAAGAASSVIQMLVPMAASMAPDERRGRAVGNVMSGLM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LGILLSRPLASLIAGAAGWRAFYGAAAAADIAIAAVLAAKLPLRAPQLSTRYAALLRSLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
TLVATERVLQRRALSAALSMAAFSAFWTAIGLRLAAAPFDLGLHGIAMFAFAGATGAIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHH
PFAGLAGDRGRERDALRGAHVAMLAALAALGVAGAGWGGFDAAAHPALALALLVAGAAAL
CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DAGVVADQTLGRRAINLLDPAMRGRLNGLFVGLFFVGGSLGAVLAGAAWAWAGWGAVCAV
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVFAGAAFALDWIGAHGPAPR
HHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]