| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453915
Identifier: 126453915
GI number: 126453915
Start: 3765441
End: 3766196
Strand: Direct
Name: 126453915
Synonym: BURPS1106A_3863
Alternate gene names: NA
Gene position: 3765441-3766196 (Clockwise)
Preceding gene: 126454719
Following gene: 126454763
Centisome position: 94.41
GC content: 68.78
Gene sequence:
>756_bases ATGGTCACCGTGACTTTCCGCTTCTACGAGGAGCTGAACGATTTCCTCGCGCGGCCGCTGCGCCGTCGCGAATTCGCGCA CGCGTGCATGCGCGGGGCGAGCGTCAAGCATGCGATCGAAGCGCTCGGCGTGCCGCATACCGAAGTCGAACTGATCCTCG TCAACGGCGAATCGACACCGTTCAGCCACGTGCTCGAAGAAGGCGACCGCGTCGCCGTCTACCCGAGCTTCGAGGCGATC GACATCCGCCCGTTGCTGCGCGTGCGCGCCGCGCCGCTGCGCGTCACGCGCTTCATCGCCGATGCGCACCTCGGCGGGCT CGCGCAATTGCTGCGGCTCGCCGGCTTCGACACGCTGTACGACAACCACTACCCGGACGAGCTGATCGAGACGATCGCCG CGCGCGAAGCGCGAATCGTCCTCACGCGCGATCGCGAACTGCTCAAGCGCCGCACGATCACGCACGGCTGCTACGTGCGC GCGCTGAAGCCGCAGGCGCAATTGCAGGAGCTGTTCGATCGGCTCGACCTCGCCGGCAGCGCGCGGCCTTTCCGGCTGTG CCTGTCGTGCAATGCGCCGCTGCGGCGCATCGATCCCGCCGAGGCTGCCGGCCGCGCGCCGCAGGGCGTGCTGCAGCGTC ACACGCGCTTCGTCACCTGCGACGTATGCCGCCGCGTGTTCTGGGAAGGCTCGCACTGGCGACGCATGCGCGCGCTGATC GAGCACGTGTCGCAACCGAAGCCGCCGCCGGGCTGA
Upstream 100 bases:
>100_bases CGTCGAAAGCACGAGTAAAGCACAGGCGCGCGACATTTGCCGTTTCGCGGCGGGCATCGCGCGATGTGCGGCAAGCGCGC GGCGGTGCGATACTCGACCG
Downstream 100 bases:
>100_bases TGCGCGCACCGATGCGTCGCGCGTGCAACGGCACGCATCGGAGGCGCATCGGAGGCGCATCGGAGGCGCATCGGAGGCGC ATAAAAACAAACCCCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MVTVTFRFYEELNDFLARPLRRREFAHACMRGASVKHAIEALGVPHTEVELILVNGESTPFSHVLEEGDRVAVYPSFEAI DIRPLLRVRAAPLRVTRFIADAHLGGLAQLLRLAGFDTLYDNHYPDELIETIAAREARIVLTRDRELLKRRTITHGCYVR ALKPQAQLQELFDRLDLAGSARPFRLCLSCNAPLRRIDPAEAAGRAPQGVLQRHTRFVTCDVCRRVFWEGSHWRRMRALI EHVSQPKPPPG
Sequences:
>Translated_251_residues MVTVTFRFYEELNDFLARPLRRREFAHACMRGASVKHAIEALGVPHTEVELILVNGESTPFSHVLEEGDRVAVYPSFEAI DIRPLLRVRAAPLRVTRFIADAHLGGLAQLLRLAGFDTLYDNHYPDELIETIAAREARIVLTRDRELLKRRTITHGCYVR ALKPQAQLQELFDRLDLAGSARPFRLCLSCNAPLRRIDPAEAAGRAPQGVLQRHTRFVTCDVCRRVFWEGSHWRRMRALI EHVSQPKPPPG >Mature_251_residues MVTVTFRFYEELNDFLARPLRRREFAHACMRGASVKHAIEALGVPHTEVELILVNGESTPFSHVLEEGDRVAVYPSFEAI DIRPLLRVRAAPLRVTRFIADAHLGGLAQLLRLAGFDTLYDNHYPDELIETIAAREARIVLTRDRELLKRRTITHGCYVR ALKPQAQLQELFDRLDLAGSARPFRLCLSCNAPLRRIDPAEAAGRAPQGVLQRHTRFVTCDVCRRVFWEGSHWRRMRALI EHVSQPKPPPG
Specific function: Unknown
COG id: COG1656
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28630; Mature: 28630
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTVTFRFYEELNDFLARPLRRREFAHACMRGASVKHAIEALGVPHTEVELILVNGESTP CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCC FSHVLEEGDRVAVYPSFEAIDIRPLLRVRAAPLRVTRFIADAHLGGLAQLLRLAGFDTLY HHHHHHCCCEEEEECCCCEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH DNHYPDELIETIAAREARIVLTRDRELLKRRTITHGCYVRALKPQAQLQELFDRLDLAGS CCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCC ARPFRLCLSCNAPLRRIDPAEAAGRAPQGVLQRHTRFVTCDVCRRVFWEGSHWRRMRALI CCCEEEEEECCCCHHHCCCHHHCCCCHHHHHHHHHHEEEHHHHHHHHCCCCHHHHHHHHH EHVSQPKPPPG HHHHCCCCCCC >Mature Secondary Structure MVTVTFRFYEELNDFLARPLRRREFAHACMRGASVKHAIEALGVPHTEVELILVNGESTP CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCC FSHVLEEGDRVAVYPSFEAIDIRPLLRVRAAPLRVTRFIADAHLGGLAQLLRLAGFDTLY HHHHHHCCCEEEEECCCCEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH DNHYPDELIETIAAREARIVLTRDRELLKRRTITHGCYVRALKPQAQLQELFDRLDLAGS CCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCC ARPFRLCLSCNAPLRRIDPAEAAGRAPQGVLQRHTRFVTCDVCRRVFWEGSHWRRMRALI CCCEEEEEECCCCHHHCCCHHHCCCCHHHHHHHHHHEEEHHHHHHHHCCCCHHHHHHHHH EHVSQPKPPPG HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA