| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454112
Identifier: 126454112
GI number: 126454112
Start: 735260
End: 736942
Strand: Direct
Name: 126454112
Synonym: BURPS1106A_0756
Alternate gene names: NA
Gene position: 735260-736942 (Clockwise)
Preceding gene: 126453708
Following gene: 126452655
Centisome position: 18.43
GC content: 70.77
Gene sequence:
>1683_bases ATGTCGAACAAGCCAGCCCCCGATGCGCCGCCCGCCGAGCAGCCTTGTGCCGTCTCGCGCCGCGGCTTTCTCAAGTTCGC CGGCGTATCCGGGCTCGCGAGCGCCGCGAGCGGCCTCGCGGTCACGCGCGCGGCGGCCGCCGCGCCCGACGGCACGCCCG AGCAGATTCATCTGACCTGGGGCGACGCCGACGCGAACGAAGTGGTCGTGTCGTGGGCGTCGCTCGCGGCCGCGACGAAC CCGCGCGTGCGCTTCGCGGGCCCGAACGAAGCGTGGCGCACCGTTCACGGCGTGCAGCGCACGTACACCGACGGCCTGAA CGGCGAAGTCGTGTTCACGTATCACGCGCGGCTGCGCGGCCTGAAGCCGGGCGCCGTCTATCGCTACGAGGTCACGGCCG ATAACGACGCCAACGCGGCGCAGCCGTTCGCCGCGCGCTTCGAGACCGCGCCGCGCGGCCGCGCGCCGTTTCGCTGGACG AGCTATGGCGACCTGGCGACGCCGAACACGGGCTGGGTGCTGTCCTCGCCGCAGAGCCGCTTCGCGGTGCAGGCGGTCGA GCGCTTCCAGCCGCTCTTTCACCTGCTGAACGGCGACCTCTGCTACGCGAACCTCAATCCCGCGCACCAGCCGGCCGTGT GGCGCGATTTCGGCAACAACAACCAGACGTCCGCCGCGAACCGCCCGTGGATGCCGTGCCCCGGCAATCACGAAATCGAA TTCCACAACGGCGCGCAAGGCCTCGATTCGTATCTCGCGCGCTACACCCTGCCGGAGAACGGCACGCGCTTTGCGGGCCG CTGGTACAGCTTCCGCGTCGGCGCGGTGCTGTTCGTGTCGCTCGACGCGGACGACGTCGTCTATCAGGACGCAGCCGCGT TCGTCGCGGGCCCGAACCCGCTCGTGCCGGCGGCGAGCACCGGCAACGAGGCGATCGCCCCCGGCACGTCGCTGTACGTG CGCGGCTACAGCCGCGGCGAGCAGACGCGCTGGCTCGAGCAGACGCTGCGCCGCGCATCGCGCGATCGCGACATCGACTG GATCGTCGTGCAGATGCATCAGGACGCGCTCAGCTCGTCGAAGACGGGCAACGGCTCGGACAAGGGCATCCGCGAAGCCT GGCTGCCGCTTTTCGATCGCTACGGCGTCGATCTCGTGCTGTGCGGGCACGATCACGACTACGAGCGCAGCTTTCCGGTG CGCGGCTGCAATCATCGAGCGGGCGTCGACGCGGCGACGGGCGAAGTCGTCGATACGCTGCAGCCGCGCCCCGTCGTCAC GACGGACCCGGCGGACGGCAGGTTCGACACGTCGCACGGCACGATTCACATGATCCTCGGCGGCGGCGGCACGAGCGCGC CGCTCGACGTGTACGGCGAGAACCCGGCGACCGGGCTGCCGCAGGCGCGCGTGTTCACGAAGCCGAACCGGCCGGTGCCG GGCGCGGCGCCGAACACGTTCGTGCGGCATGGCGCGGACGCCGTGGAGGACGCGATCTGGTCCGCGCGGCGCGACACGGG CACGGGCTACGGGATCGCGGTGTTCGATTACGAGCCGGGCGAGCACGGCGGCCGCTCGACGATCACCGTGAACTACTATC ACGCGCCGGGCGCCGACCAGCATCCGACGGCCGAGTACGAACTGTTCGAGACGATCGTGCTCAGCAAGCCGCGCCGCGCG TAA
Upstream 100 bases:
>100_bases CGCGTCACGCATCCCGTCATAAGGTGTCGGCGCCGACGCGCGGCGAACGCCGTTCGCCGTCGTCCCTTTCCCGCAGATCT TCCGACGATCGGACGAAACC
Downstream 100 bases:
>100_bases GCGGCGCGGCCGACGCGGCGGCGCGCTCGATCGCGCGGGCCGCGTCGCGGGCGGCGCTCGCGCCGTTCGTGGCGTGCACG TCGTTCACGTTGTTCGCGCC
Product: Ser/Thr protein phosphatase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MSNKPAPDAPPAEQPCAVSRRGFLKFAGVSGLASAASGLAVTRAAAAAPDGTPEQIHLTWGDADANEVVVSWASLAAATN PRVRFAGPNEAWRTVHGVQRTYTDGLNGEVVFTYHARLRGLKPGAVYRYEVTADNDANAAQPFAARFETAPRGRAPFRWT SYGDLATPNTGWVLSSPQSRFAVQAVERFQPLFHLLNGDLCYANLNPAHQPAVWRDFGNNNQTSAANRPWMPCPGNHEIE FHNGAQGLDSYLARYTLPENGTRFAGRWYSFRVGAVLFVSLDADDVVYQDAAAFVAGPNPLVPAASTGNEAIAPGTSLYV RGYSRGEQTRWLEQTLRRASRDRDIDWIVVQMHQDALSSSKTGNGSDKGIREAWLPLFDRYGVDLVLCGHDHDYERSFPV RGCNHRAGVDAATGEVVDTLQPRPVVTTDPADGRFDTSHGTIHMILGGGGTSAPLDVYGENPATGLPQARVFTKPNRPVP GAAPNTFVRHGADAVEDAIWSARRDTGTGYGIAVFDYEPGEHGGRSTITVNYYHAPGADQHPTAEYELFETIVLSKPRRA
Sequences:
>Translated_560_residues MSNKPAPDAPPAEQPCAVSRRGFLKFAGVSGLASAASGLAVTRAAAAAPDGTPEQIHLTWGDADANEVVVSWASLAAATN PRVRFAGPNEAWRTVHGVQRTYTDGLNGEVVFTYHARLRGLKPGAVYRYEVTADNDANAAQPFAARFETAPRGRAPFRWT SYGDLATPNTGWVLSSPQSRFAVQAVERFQPLFHLLNGDLCYANLNPAHQPAVWRDFGNNNQTSAANRPWMPCPGNHEIE FHNGAQGLDSYLARYTLPENGTRFAGRWYSFRVGAVLFVSLDADDVVYQDAAAFVAGPNPLVPAASTGNEAIAPGTSLYV RGYSRGEQTRWLEQTLRRASRDRDIDWIVVQMHQDALSSSKTGNGSDKGIREAWLPLFDRYGVDLVLCGHDHDYERSFPV RGCNHRAGVDAATGEVVDTLQPRPVVTTDPADGRFDTSHGTIHMILGGGGTSAPLDVYGENPATGLPQARVFTKPNRPVP GAAPNTFVRHGADAVEDAIWSARRDTGTGYGIAVFDYEPGEHGGRSTITVNYYHAPGADQHPTAEYELFETIVLSKPRRA >Mature_559_residues SNKPAPDAPPAEQPCAVSRRGFLKFAGVSGLASAASGLAVTRAAAAAPDGTPEQIHLTWGDADANEVVVSWASLAAATNP RVRFAGPNEAWRTVHGVQRTYTDGLNGEVVFTYHARLRGLKPGAVYRYEVTADNDANAAQPFAARFETAPRGRAPFRWTS YGDLATPNTGWVLSSPQSRFAVQAVERFQPLFHLLNGDLCYANLNPAHQPAVWRDFGNNNQTSAANRPWMPCPGNHEIEF HNGAQGLDSYLARYTLPENGTRFAGRWYSFRVGAVLFVSLDADDVVYQDAAAFVAGPNPLVPAASTGNEAIAPGTSLYVR GYSRGEQTRWLEQTLRRASRDRDIDWIVVQMHQDALSSSKTGNGSDKGIREAWLPLFDRYGVDLVLCGHDHDYERSFPVR GCNHRAGVDAATGEVVDTLQPRPVVTTDPADGRFDTSHGTIHMILGGGGTSAPLDVYGENPATGLPQARVFTKPNRPVPG AAPNTFVRHGADAVEDAIWSARRDTGTGYGIAVFDYEPGEHGGRSTITVNYYHAPGADQHPTAEYELFETIVLSKPRRA
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI20129007, Length=372, Percent_Identity=24.1935483870968, Blast_Score=75, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR008963 - InterPro: IPR015914 - InterPro: IPR006311 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 60653; Mature: 60521
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKPAPDAPPAEQPCAVSRRGFLKFAGVSGLASAASGLAVTRAAAAAPDGTPEQIHLTW CCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEE GDADANEVVVSWASLAAATNPRVRFAGPNEAWRTVHGVQRTYTDGLNGEVVFTYHARLRG CCCCCCHHEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCC LKPGAVYRYEVTADNDANAAQPFAARFETAPRGRAPFRWTSYGDLATPNTGWVLSSPQSR CCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEECCCHHH FAVQAVERFQPLFHLLNGDLCYANLNPAHQPAVWRDFGNNNQTSAANRPWMPCPGNHEIE HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEE FHNGAQGLDSYLARYTLPENGTRFAGRWYSFRVGAVLFVSLDADDVVYQDAAAFVAGPNP ECCCHHHHHHHHHHCCCCCCCCEEECEEEEEEEEEEEEEEECCCCHHHHCCHHEEECCCC LVPAASTGNEAIAPGTSLYVRGYSRGEQTRWLEQTLRRASRDRDIDWIVVQMHQDALSSS CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHCC KTGNGSDKGIREAWLPLFDRYGVDLVLCGHDHDYERSFPVRGCNHRAGVDAATGEVVDTL CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC QPRPVVTTDPADGRFDTSHGTIHMILGGGGTSAPLDVYGENPATGLPQARVFTKPNRPVP CCCCEEEECCCCCCEECCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCEEEECCCCCCC GAAPNTFVRHGADAVEDAIWSARRDTGTGYGIAVFDYEPGEHGGRSTITVNYYHAPGADQ CCCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCC HPTAEYELFETIVLSKPRRA CCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure SNKPAPDAPPAEQPCAVSRRGFLKFAGVSGLASAASGLAVTRAAAAAPDGTPEQIHLTW CCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEE GDADANEVVVSWASLAAATNPRVRFAGPNEAWRTVHGVQRTYTDGLNGEVVFTYHARLRG CCCCCCHHEEEHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCC LKPGAVYRYEVTADNDANAAQPFAARFETAPRGRAPFRWTSYGDLATPNTGWVLSSPQSR CCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEECCCHHH FAVQAVERFQPLFHLLNGDLCYANLNPAHQPAVWRDFGNNNQTSAANRPWMPCPGNHEIE HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEE FHNGAQGLDSYLARYTLPENGTRFAGRWYSFRVGAVLFVSLDADDVVYQDAAAFVAGPNP ECCCHHHHHHHHHHCCCCCCCCEEECEEEEEEEEEEEEEEECCCCHHHHCCHHEEECCCC LVPAASTGNEAIAPGTSLYVRGYSRGEQTRWLEQTLRRASRDRDIDWIVVQMHQDALSSS CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHCC KTGNGSDKGIREAWLPLFDRYGVDLVLCGHDHDYERSFPVRGCNHRAGVDAATGEVVDTL CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC QPRPVVTTDPADGRFDTSHGTIHMILGGGGTSAPLDVYGENPATGLPQARVFTKPNRPVP CCCCEEEECCCCCCEECCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCEEEECCCCCCC GAAPNTFVRHGADAVEDAIWSARRDTGTGYGIAVFDYEPGEHGGRSTITVNYYHAPGADQ CCCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCC HPTAEYELFETIVLSKPRRA CCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]