| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452655
Identifier: 126452655
GI number: 126452655
Start: 740960
End: 741541
Strand: Direct
Name: 126452655
Synonym: BURPS1106A_0759
Alternate gene names: NA
Gene position: 740960-741541 (Clockwise)
Preceding gene: 126454112
Following gene: 126453397
Centisome position: 18.58
GC content: 69.93
Gene sequence:
>582_bases ATGACTCGCCGCTCCACTTTTTCGCTCGCCGGCGCGTGTGCCGCCGCGCTATTCGCCTTCGCGACCGCCGCATCCGCGCA GAACGCGCCCGCGCCGACGCAGCCGCGCCCCGAAGCCGCCGCCGACACGCGCTTGCACGAAGCCGATCAGGCTTTCGTCA CCGACGCGACGAAGGCCGTGTCGACGCAGCGCGACGCGGCGCGCATCGCGGATTCGCGCTCGAGCGACCGCGCGGTGAAG GCGTTCGCCGCGCGCGTCGCGGCCGACAACGAGAAGCTGTCGCAGGCGCTGCGCGCCGCGAGTCCGCGCGGTGTCGACGT GCCGCACAACGACCACGATCCGGCCGTGCTCGACGGCATCAAGAACCTGCGCGGCGACGCGTTCGACAAGGCGTATATCG AGCAGGTCGCGCTCGACGGCAACCGCAAGGCGCTGTCGGTGTTCCAGGCCGAGATCGCATCGGGCCGCAACGAGCAGTTG AAGAATGCCGCGCGCAAGGGCTTGCCGGTGATCCAGGCGCACTACCAGGCGGCTCAGGAACTCGCGAGCCGCAAGCACCT GACGAGCGACGCATCGAAGTAA
Upstream 100 bases:
>100_bases CGCGGCGACGGCATCGAGTGCTTCGCCGCGCCATGCCCGGCCCGTAGCGTCCCAACCCCGATCATCGATCCTTTGACGAC TTTCACCCTAAGGAGAACGT
Downstream 100 bases:
>100_bases CGCCGGCCGATCGCTGTCCGGCGCCGTCGTCGCGGCGGCGCGCTCGGCAGCGGCCGCTAACGGCGAGCCCGCTCGCCGTG CGGCCGGCGAGCGGAACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTRRSTFSLAGACAAALFAFATAASAQNAPAPTQPRPEAAADTRLHEADQAFVTDATKAVSTQRDAARIADSRSSDRAVK AFAARVAADNEKLSQALRAASPRGVDVPHNDHDPAVLDGIKNLRGDAFDKAYIEQVALDGNRKALSVFQAEIASGRNEQL KNAARKGLPVIQAHYQAAQELASRKHLTSDASK
Sequences:
>Translated_193_residues MTRRSTFSLAGACAAALFAFATAASAQNAPAPTQPRPEAAADTRLHEADQAFVTDATKAVSTQRDAARIADSRSSDRAVK AFAARVAADNEKLSQALRAASPRGVDVPHNDHDPAVLDGIKNLRGDAFDKAYIEQVALDGNRKALSVFQAEIASGRNEQL KNAARKGLPVIQAHYQAAQELASRKHLTSDASK >Mature_192_residues TRRSTFSLAGACAAALFAFATAASAQNAPAPTQPRPEAAADTRLHEADQAFVTDATKAVSTQRDAARIADSRSSDRAVKA FAARVAADNEKLSQALRAASPRGVDVPHNDHDPAVLDGIKNLRGDAFDKAYIEQVALDGNRKALSVFQAEIASGRNEQLK NAARKGLPVIQAHYQAAQELASRKHLTSDASK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20446; Mature: 20315
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRSTFSLAGACAAALFAFATAASAQNAPAPTQPRPEAAADTRLHEADQAFVTDATKAV CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH STQRDAARIADSRSSDRAVKAFAARVAADNEKLSQALRAASPRGVDVPHNDHDPAVLDGI HHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH KNLRGDAFDKAYIEQVALDGNRKALSVFQAEIASGRNEQLKNAARKGLPVIQAHYQAAQE HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH LASRKHLTSDASK HHHHHHHHCCCCC >Mature Secondary Structure TRRSTFSLAGACAAALFAFATAASAQNAPAPTQPRPEAAADTRLHEADQAFVTDATKAV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH STQRDAARIADSRSSDRAVKAFAARVAADNEKLSQALRAASPRGVDVPHNDHDPAVLDGI HHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH KNLRGDAFDKAYIEQVALDGNRKALSVFQAEIASGRNEQLKNAARKGLPVIQAHYQAAQE HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH LASRKHLTSDASK HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA