| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126453708
Identifier: 126453708
GI number: 126453708
Start: 734039
End: 734386
Strand: Direct
Name: 126453708
Synonym: BURPS1106A_0753
Alternate gene names: NA
Gene position: 734039-734386 (Clockwise)
Preceding gene: 126452805
Following gene: 126454112
Centisome position: 18.4
GC content: 61.78
Gene sequence:
>348_bases ATGCTTTATACCGGCAGCTGCCATTGCGGCAAGGTCAGGTTCGAAGTGGAAGGGGAGATCGACGGTGCATGCGCCTGCAA CTGTTCGATGTGCGCGCGCAAGGGGTCTCTGTTGTGGTTCGTGCCGCGCGACGCGTTGCGTCTGCAAACGCCCGACGAAG ACATCGCGACCTATCTGTTCAACAAGCATGTGATTCGGCATCGGTTCTGTCCGAGCTGCGGGATTCATCCGTTCGCGGAA GGCACGGACCCGAAGGGCAACGCGATGGCGGCCGTCAATCTTCGCTGCGTCGACGGCGTCGATCTCGACGCGTTGAGCGT CCGCCATTTCGACGGGCGCGCGCTCTGA
Upstream 100 bases:
>100_bases TTGCGATTCGCCCGGCCGGGCGTTACCGTACGCCACCGGGCGGGCGTTCGGATGCGGCAGACCCGCGTCGCCGCACCGGA ACCGATCCAAGGAGGCGACG
Downstream 100 bases:
>100_bases GCGTTTCGGGCGGCGCGTTCGCGCCGCCGGGGGCGCGAGGCGCGCGGAACGCGCCGCGCCTGTCCCGCGTCTGCGCGTTC GCGCGCGTGCGGTCTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Plasmid PRiA4b ORF-3 Family Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MLYTGSCHCGKVRFEVEGEIDGACACNCSMCARKGSLLWFVPRDALRLQTPDEDIATYLFNKHVIRHRFCPSCGIHPFAE GTDPKGNAMAAVNLRCVDGVDLDALSVRHFDGRAL
Sequences:
>Translated_115_residues MLYTGSCHCGKVRFEVEGEIDGACACNCSMCARKGSLLWFVPRDALRLQTPDEDIATYLFNKHVIRHRFCPSCGIHPFAE GTDPKGNAMAAVNLRCVDGVDLDALSVRHFDGRAL >Mature_115_residues MLYTGSCHCGKVRFEVEGEIDGACACNCSMCARKGSLLWFVPRDALRLQTPDEDIATYLFNKHVIRHRFCPSCGIHPFAE GTDPKGNAMAAVNLRCVDGVDLDALSVRHFDGRAL
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=112, Percent_Identity=36.6071428571429, Blast_Score=74, Evalue=4e-14, Organism=Caenorhabditis elegans, GI25149380, Length=111, Percent_Identity=34.2342342342342, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12661; Mature: 12661
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 7.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYTGSCHCGKVRFEVEGEIDGACACNCSMCARKGSLLWFVPRDALRLQTPDEDIATYLF CEECCCCCCCEEEEEECCCCCCEEEECCHHHCCCCCEEEEECCCCEEEECCCHHHHHHHH NKHVIRHRFCPSCGIHPFAEGTDPKGNAMAAVNLRCVDGVDLDALSVRHFDGRAL HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCC >Mature Secondary Structure MLYTGSCHCGKVRFEVEGEIDGACACNCSMCARKGSLLWFVPRDALRLQTPDEDIATYLF CEECCCCCCCEEEEEECCCCCCEEEECCHHHCCCCCEEEEECCCCEEEECCCHHHHHHHH NKHVIRHRFCPSCGIHPFAEGTDPKGNAMAAVNLRCVDGVDLDALSVRHFDGRAL HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA