Click here to switch to the map view.

The map label for this gene is sopA [C]

Identifier: 126453932

GI number: 126453932

Start: 3957873

End: 3958643

Strand: Reverse

Name: sopA [C]

Synonym: BURPS1106A_4054

Alternate gene names: 126453932

Gene position: 3958643-3957873 (Counterclockwise)

Preceding gene: 126454474

Following gene: 126452714

Centisome position: 99.25

GC content: 61.74

Gene sequence:

>771_bases
ATGGCAAAGATCTTCTGCGTGGCGAACCAGAAGGGCGGCGTAGGCAAGACGACGACGACGGTCAATCTCGCCGCGAGCCT
CGCGGCGCAGGGGCAGCGCGTGCTGCTGATCGATCTGGACCCGCAGGGCAATGCCACGATGGGCAGCGGCATCGACAAGG
CGGAATGCGAGTCGACGGTCTATGAGGTGCTGGTCGATGGTGTGACGGTTGCGGACGCGCGCGTGCGTCCCGAAGCGGTC
AAGTACGACGTTTTGCCGGCGAACCGCGAACTTGCCGGTGCGGAAATCGAGCTGGTCAGCGTGGAGAATCGCGAGCGCCA
GTTGAAGGCTGCGCTCGCGAAAGTCGCTGACGATTACGATTTCGTGCTGATCGATTGTCCTCCCGCGCTGTCGTTGCTGA
CGCTGAATGGTTTGTGTGCGGCGCATGGCGTCGTGATCCCGATGCAATGCGAATATTTCGCGCTCGAGGGCTTGTCCGAC
CTCGTCAACACGATCAAGCAGGTGCATGCGAACCTGAATCGGGATTTGAAAGTCATCGGTCTGCTGCGAGTGATGTTCGA
TCCGCGGATCACGCTGCAGCAACAGGTTTCCGATCAGTTGAAGGCGCACTTCGGCGACAAGGTGTTCGACGCTGTGATTC
CGCGCAACGTGCGCCTTGCCGAGGCGCCCAGCTATGGGCTCCCCGGCGTCGTATTCGATCGCGGTTCGCGCGGCGCGCAG
GCGTACATTCAGTTCGGCGCGGAAATGATCGAGCGGGTGCGCGCGCTTTGA

Upstream 100 bases:

>100_bases
GATGCGGAACGGCACTTGATCGAAGTCGAGCTCGACGAAGCAATTTAACCGGTGCGCCGCAGGGCGCCCGGACCATTTGA
AGAGAAGGAATACACCAACG

Downstream 100 bases:

>100_bases
GCCGGCCTTCCAGACGAGAATCGAGGGAACAGAACATGAATGCTGTAGCGAAGAAAAAGGGTTTGGGACGTGGCCTCGAG
GCGCTGCTCGGCGGTAGCGC

Product: CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MAKIFCVANQKGGVGKTTTTVNLAASLAAQGQRVLLIDLDPQGNATMGSGIDKAECESTVYEVLVDGVTVADARVRPEAV
KYDVLPANRELAGAEIELVSVENRERQLKAALAKVADDYDFVLIDCPPALSLLTLNGLCAAHGVVIPMQCEYFALEGLSD
LVNTIKQVHANLNRDLKVIGLLRVMFDPRITLQQQVSDQLKAHFGDKVFDAVIPRNVRLAEAPSYGLPGVVFDRGSRGAQ
AYIQFGAEMIERVRAL

Sequences:

>Translated_256_residues
MAKIFCVANQKGGVGKTTTTVNLAASLAAQGQRVLLIDLDPQGNATMGSGIDKAECESTVYEVLVDGVTVADARVRPEAV
KYDVLPANRELAGAEIELVSVENRERQLKAALAKVADDYDFVLIDCPPALSLLTLNGLCAAHGVVIPMQCEYFALEGLSD
LVNTIKQVHANLNRDLKVIGLLRVMFDPRITLQQQVSDQLKAHFGDKVFDAVIPRNVRLAEAPSYGLPGVVFDRGSRGAQ
AYIQFGAEMIERVRAL
>Mature_255_residues
AKIFCVANQKGGVGKTTTTVNLAASLAAQGQRVLLIDLDPQGNATMGSGIDKAECESTVYEVLVDGVTVADARVRPEAVK
YDVLPANRELAGAEIELVSVENRERQLKAALAKVADDYDFVLIDCPPALSLLTLNGLCAAHGVVIPMQCEYFALEGLSDL
VNTIKQVHANLNRDLKVIGLLRVMFDPRITLQQQVSDQLKAHFGDKVFDAVIPRNVRLAEAPSYGLPGVVFDRGSRGAQA
YIQFGAEMIERVRAL

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis soj [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27649; Mature: 27518

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIFCVANQKGGVGKTTTTVNLAASLAAQGQRVLLIDLDPQGNATMGSGIDKAECESTV
CCEEEEEECCCCCCCCCEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YEVLVDGVTVADARVRPEAVKYDVLPANRELAGAEIELVSVENRERQLKAALAKVADDYD
HHHHHCCEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCC
FVLIDCPPALSLLTLNGLCAAHGVVIPMQCEYFALEGLSDLVNTIKQVHANLNRDLKVIG
EEEEECCCCHHHHHHCCHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LLRVMFDPRITLQQQVSDQLKAHFGDKVFDAVIPRNVRLAEAPSYGLPGVVFDRGSRGAQ
HHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCHH
AYIQFGAEMIERVRAL
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKIFCVANQKGGVGKTTTTVNLAASLAAQGQRVLLIDLDPQGNATMGSGIDKAECESTV
CEEEEEECCCCCCCCCEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YEVLVDGVTVADARVRPEAVKYDVLPANRELAGAEIELVSVENRERQLKAALAKVADDYD
HHHHHCCEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCC
FVLIDCPPALSLLTLNGLCAAHGVVIPMQCEYFALEGLSDLVNTIKQVHANLNRDLKVIG
EEEEECCCCHHHHHHCCHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LLRVMFDPRITLQQQVSDQLKAHFGDKVFDAVIPRNVRLAEAPSYGLPGVVFDRGSRGAQ
HHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCHH
AYIQFGAEMIERVRAL
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]