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The map label for this gene is parB [H]

Identifier: 126452714

GI number: 126452714

Start: 3956950

End: 3957837

Strand: Reverse

Name: parB [H]

Synonym: BURPS1106A_4053

Alternate gene names: 126452714

Gene position: 3957837-3956950 (Counterclockwise)

Preceding gene: 126453932

Following gene: 126451626

Centisome position: 99.23

GC content: 66.22

Gene sequence:

>888_bases
ATGAATGCTGTAGCGAAGAAAAAGGGTTTGGGACGTGGCCTCGAGGCGCTGCTCGGCGGTAGCGCCGACATCACCGAAGC
GGTGAAGATCGAAGGCGCGCCGAACGTACTCGCGCTCGGCAAACTGCAGGCCGGCAAGTACCAGCCGCGTACCCGAATGG
ACGAGGGCAGCCTGCAGGAGCTCGCCGCGAGCATTCGCGCGCAGGGTGTGATGCAGCCGATCCTCGTACGTCCCATTTCA
TCAGACAAATACGAGATCATCGCGGGTGAGCGCCGTTTCCGTGCGGCGCGCCTCGCGGGGCTGGAGGAAGTGCCGGTGCT
CGTGAAGGACGTGTCCGATCAGGCCGCGGCCGCCATGGCGCTGATCGAGAACATCCAGCGCGAGGATCTGAACCCGCTCG
AAGAGGCTCACGGGATCCAGCGCCTGCTCGACGAGTTCGGCTTCACGCACGAGCAGGCGGCCGAATCGGTCGGCCGCTCG
CGCAGCGCGGTGTCGAACCTGCTGCGTCTTCTGAACCTCGCAATGCCCGTGCAGACGATGCTGCTTGCGGGCGATCTCGA
CATGGGCCACGCGCGTGCGCTGCTCGCCGTCGATGCGGCGACGCAGATCACGCTCGCGCATCAGGTGGTCAACAAGCGGA
TGTCGGTGCGCGAGACGGAAAAGCTCGTCGCACACACGACGAAGGCCGAGCCGGCGGTGAAGGCGCGGGCGAAGGACGAT
GGCGGGCGCGATACGCGGCGCCTCGAAGAAGAGCTGTCGGACCTGCTCGCGTCGAACGTGAAGATCAAGGTCGGCCGTCG
CGGGCGGGGCCAACTGACGATCGATTTCGGCGACCTCGACGCGCTCGAAGGCATCCTCGCGCGGCTGCGCGGCAACGTTG
CCGCTTGA

Upstream 100 bases:

>100_bases
CGCGCGGCGCGCAGGCGTACATTCAGTTCGGCGCGGAAATGATCGAGCGGGTGCGCGCGCTTTGAGCCGGCCTTCCAGAC
GAGAATCGAGGGAACAGAAC

Downstream 100 bases:

>100_bases
CCGCGCCGTGTCGAATTCGGTCGTCGGGCGCGCGCCCGCGCGGATCATCGCGTTCGTCCGGCACGAGCCGGTTCTCTCGA
TTCTCGTCGCGGCGCTGATT

Product: ParB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNAVAKKKGLGRGLEALLGGSADITEAVKIEGAPNVLALGKLQAGKYQPRTRMDEGSLQELAASIRAQGVMQPILVRPIS
SDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQAAAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRS
RSAVSNLLRLLNLAMPVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKAEPAVKARAKDD
GGRDTRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGNVAA

Sequences:

>Translated_295_residues
MNAVAKKKGLGRGLEALLGGSADITEAVKIEGAPNVLALGKLQAGKYQPRTRMDEGSLQELAASIRAQGVMQPILVRPIS
SDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQAAAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRS
RSAVSNLLRLLNLAMPVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKAEPAVKARAKDD
GGRDTRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGNVAA
>Mature_295_residues
MNAVAKKKGLGRGLEALLGGSADITEAVKIEGAPNVLALGKLQAGKYQPRTRMDEGSLQELAASIRAQGVMQPILVRPIS
SDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQAAAAMALIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRS
RSAVSNLLRLLNLAMPVQTMLLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKAEPAVKARAKDD
GGRDTRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGNVAA

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 31783; Mature: 31783

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVAKKKGLGRGLEALLGGSADITEAVKIEGAPNVLALGKLQAGKYQPRTRMDEGSLQE
CCCHHHHHCCCHHHHHHHCCCCCCCHHEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHH
LAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQAAAAMA
HHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHH
LIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAMPVQTM
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKAEPAVKARAKDD
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
GGRDTRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGNVAA
CCHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNAVAKKKGLGRGLEALLGGSADITEAVKIEGAPNVLALGKLQAGKYQPRTRMDEGSLQE
CCCHHHHHCCCHHHHHHHCCCCCCCHHEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHH
LAASIRAQGVMQPILVRPISSDKYEIIAGERRFRAARLAGLEEVPVLVKDVSDQAAAAMA
HHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHH
LIENIQREDLNPLEEAHGIQRLLDEFGFTHEQAAESVGRSRSAVSNLLRLLNLAMPVQTM
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LLAGDLDMGHARALLAVDAATQITLAHQVVNKRMSVRETEKLVAHTTKAEPAVKARAKDD
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
GGRDTRRLEEELSDLLASNVKIKVGRRGRGQLTIDFGDLDALEGILARLRGNVAA
CCHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]