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The map label for this gene is gidB [H]

Identifier: 126454474

GI number: 126454474

Start: 3958696

End: 3959337

Strand: Reverse

Name: gidB [H]

Synonym: BURPS1106A_4055

Alternate gene names: 126454474

Gene position: 3959337-3958696 (Counterclockwise)

Preceding gene: 126451633

Following gene: 126453932

Centisome position: 99.27

GC content: 63.08

Gene sequence:

>642_bases
TTGCTGTCGGAGGGTGCGCAAGCGCTGGGCGTCGCGTTGAGCGATGCGCAACGCAGCGCATTGCTTGATTACGTCGCACT
GCTCGCCAAGTGGAATGCGGTTTACAACCTCACCGCGATCCGCGATCCGCGGCAAATGCTGATTCAACACATCCTCGATT
CGCTATCGATCGTCCCGCATCTCGGGGCGCACGGCGCGGCGGCGGCTGCGCTCGATGTCGGTTCCGGAGGCGGTTTGCCG
GGCGTCGTACTCGCGATCGCGCTGCCTGGCTGGCGGGTCACGTTGAACGACATCGTCCATAAGAAATCCGCATTCCAGAA
CCAGGCGAAGGCAGAGTTGAAGCTCGGCAATCTGTCCGTCGTGACGGGGCGCGTCGAAACGCTGCGCCCGGGCGCCGACG
TGCCGGCGAAATTCGATGTGATCGTGTCGCGCGCATTCGCGGATCTGGCGGACTTCGTTACACTTGCCCGGCACCTCGTT
GCGCCGGGCGGGTCGATCTGGGCGATGAAGGGCGTGCGTCCCGATGAAGAAATCGGTCGCTTGCCCGATGGCGCGCGCGT
CAAACAGATGATCCGCCTGACGGTCCCGTCGCTCGATGCGGAACGGCACTTGATCGAAGTCGAGCTCGACGAAGCAATTT
AA

Upstream 100 bases:

>100_bases
TACCGGGCGCCGACGTGCAAGCCGACAACACGGCGGCGCAACAATGACGGTGCAACAGCGTCGCCGCCCCCCGATTGCCA
GCCGGGAAACGCTGCAAGCA

Downstream 100 bases:

>100_bases
CCGGTGCGCCGCAGGGCGCCCGGACCATTTGAAGAGAAGGAATACACCAACGATGGCAAAGATCTTCTGCGTGGCGAACC
AGAAGGGCGGCGTAGGCAAG

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MLSEGAQALGVALSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLP
GVVLAIALPGWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLV
APGGSIWAMKGVRPDEEIGRLPDGARVKQMIRLTVPSLDAERHLIEVELDEAI

Sequences:

>Translated_213_residues
MLSEGAQALGVALSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLP
GVVLAIALPGWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLV
APGGSIWAMKGVRPDEEIGRLPDGARVKQMIRLTVPSLDAERHLIEVELDEAI
>Mature_213_residues
MLSEGAQALGVALSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLP
GVVLAIALPGWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLV
APGGSIWAMKGVRPDEEIGRLPDGARVKQMIRLTVPSLDAERHLIEVELDEAI

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=198, Percent_Identity=42.9292929292929, Blast_Score=167, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: =2.1.1.170 [H]

Molecular weight: Translated: 22624; Mature: 22624

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEGAQALGVALSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHC
LGAHGAAAAALDVGSGGGLPGVVLAIALPGWRVTLNDIVHKKSAFQNQAKAELKLGNLSV
CCCCCCHHHEEECCCCCCCCHHHHHEECCCCEEEHHHHHHHHHHHHHHHHHEEEECCEEE
VTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLVAPGGSIWAMKGVRPDEEIGR
EECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCC
LPDGARVKQMIRLTVPSLDAERHLIEVELDEAI
CCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MLSEGAQALGVALSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHC
LGAHGAAAAALDVGSGGGLPGVVLAIALPGWRVTLNDIVHKKSAFQNQAKAELKLGNLSV
CCCCCCHHHEEECCCCCCCCHHHHHEECCCCEEEHHHHHHHHHHHHHHHHHEEEECCEEE
VTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLVAPGGSIWAMKGVRPDEEIGR
EECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCC
LPDGARVKQMIRLTVPSLDAERHLIEVELDEAI
CCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA