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The map label for this gene is amiC [H]

Identifier: 126453909

GI number: 126453909

Start: 3023861

End: 3025168

Strand: Direct

Name: amiC [H]

Synonym: BURPS1106A_3103

Alternate gene names: 126453909

Gene position: 3023861-3025168 (Clockwise)

Preceding gene: 126452692

Following gene: 226830772

Centisome position: 75.82

GC content: 64.3

Gene sequence:

>1308_bases
ATGAAACGTCGCAGTCTTTTGAAGTTCGGATCGATGGCAGGCGTCATGGCGCTCGCGGGGCAAAGCCCCGTCGCGCGCGC
GGCGGATTCGGGCAAAGGCCCGATCAAGGTCGGCATCCTGCATTCGCTGTCGGGCACGATGGCGATCTCCGAGACTTCGC
TCAAGGACACCGCGCTGATGACGATCGCCGACATCAACAAGAACGGCGGCGTGCTCGGGCGGCCGCTGCAGCCCGTCGTC
GTCGATCCCGCGTCGAACTGGCCGCTGTTCGCCGAGAAGGCGCGCCAGTTGCTCACGCAGGAGAAGGTCGCATGCGTGTT
CGGCTGCTGGACGTCGGTGTCGCGCAAGTCGGTGCTGCCCGTGTTCGAGGAGCTGAACGGCCTGCTCTACTACCCGGTGC
AGTACGAGGGCGAGGAGATGTCGCGCAACGTGTTCTACACGGGCGCCGCGCCGAACCAGCAGGCGATTCCGGCCGTCGAG
TACATGATGAGCGCCGAAGGCGGCGGCGCGAAGCGCTTCTTCCTGCTCGGCACCGATTACGTCTACCCGCGCACGACCAA
CAAGATCCTGCGCGCGTTCCTGAAATCGAAGGGCGTGAAAGATTCCGATATTCAGGAAGTCTACACACCGTTCGGGCACA
GCGATTACCAGACGATCGTCGCGAACATCAAGACCTTCGCGCAAGGCGGCAAGACCACCGTGATCTCGACGATCAACGGC
GATTCGAACGTGCCGTTCTACAAGGAGCTCGGCAATCAGGGGCTCAAGGCGACCGACGTGCCCGTCGTCGCGTTCTCGGT
CGGCGAGGAGGAACTGCGCGGCATCGACACGAAGCCGCTCGTCGGGCATCTGGCCGCGTGGAATTACTTCATGTCGGTGA
AGGGGCCGGCGAACGCGAAGTTCAAGGAGCAGTTCGCCGCGTGGGTGAAGTCGCAGAATCTGCCGGGCGGCGCGAAGCGC
GTGACCAACGATCCGATGGAGGCGACGTTCGTCGGCATCCACATGTGGAAGCAGGCGGTCGAGAAGGCGAAGAGCACCGA
TGTCGACCGCGTGCGCACGGCGATGATCGGCCAGAGCGTCGCCGCGCCGTCGGGCTTCACACTGACGATGGATGGCAACC
ATCATCTGCACAAGCCGGTGATGATCGGCGAGATTCGCGGCGACGGCCAGTTCAACGTCGTCTGGAAAACGAAGACGGCG
ATTCGCGCGCAGCCGTGGAGCCCGTTCATCGCGGGCAACCAGGGCAAGCCGGACGTGGTCGGCTCGATTCCGGAGTTCCT
GCGCCGCCGTCGCGCCGCGCTCGCCTGA

Upstream 100 bases:

>100_bases
GCACGCGCGCCGGCCCGCATCTGGCACATGCCTTGCGTAACCGGTTCGCCGCGTGTCCGCTCCGGTGCGCGCCCACACTC
CAACAGGCAAGGGGAACTCG

Downstream 100 bases:

>100_bases
CGCGCGTGCGGGCGCCGCGCCAGCGCACGGCGTCGCCGTCGCGCGCGTCCGCGCCGCGCGCTTTCTCCCCTTTCGCGAGG
ACTGACCGATGCCCATGCCT

Product: putative amino acid ABC transporter, periplasmic amino acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MKRRSLLKFGSMAGVMALAGQSPVARAADSGKGPIKVGILHSLSGTMAISETSLKDTALMTIADINKNGGVLGRPLQPVV
VDPASNWPLFAEKARQLLTQEKVACVFGCWTSVSRKSVLPVFEELNGLLYYPVQYEGEEMSRNVFYTGAAPNQQAIPAVE
YMMSAEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVKDSDIQEVYTPFGHSDYQTIVANIKTFAQGGKTTVISTING
DSNVPFYKELGNQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKGPANAKFKEQFAAWVKSQNLPGGAKR
VTNDPMEATFVGIHMWKQAVEKAKSTDVDRVRTAMIGQSVAAPSGFTLTMDGNHHLHKPVMIGEIRGDGQFNVVWKTKTA
IRAQPWSPFIAGNQGKPDVVGSIPEFLRRRRAALA

Sequences:

>Translated_435_residues
MKRRSLLKFGSMAGVMALAGQSPVARAADSGKGPIKVGILHSLSGTMAISETSLKDTALMTIADINKNGGVLGRPLQPVV
VDPASNWPLFAEKARQLLTQEKVACVFGCWTSVSRKSVLPVFEELNGLLYYPVQYEGEEMSRNVFYTGAAPNQQAIPAVE
YMMSAEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVKDSDIQEVYTPFGHSDYQTIVANIKTFAQGGKTTVISTING
DSNVPFYKELGNQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKGPANAKFKEQFAAWVKSQNLPGGAKR
VTNDPMEATFVGIHMWKQAVEKAKSTDVDRVRTAMIGQSVAAPSGFTLTMDGNHHLHKPVMIGEIRGDGQFNVVWKTKTA
IRAQPWSPFIAGNQGKPDVVGSIPEFLRRRRAALA
>Mature_435_residues
MKRRSLLKFGSMAGVMALAGQSPVARAADSGKGPIKVGILHSLSGTMAISETSLKDTALMTIADINKNGGVLGRPLQPVV
VDPASNWPLFAEKARQLLTQEKVACVFGCWTSVSRKSVLPVFEELNGLLYYPVQYEGEEMSRNVFYTGAAPNQQAIPAVE
YMMSAEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVKDSDIQEVYTPFGHSDYQTIVANIKTFAQGGKTTVISTING
DSNVPFYKELGNQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKGPANAKFKEQFAAWVKSQNLPGGAKR
VTNDPMEATFVGIHMWKQAVEKAKSTDVDRVRTAMIGQSVAAPSGFTLTMDGNHHLHKPVMIGEIRGDGQFNVVWKTKTA
IRAQPWSPFIAGNQGKPDVVGSIPEFLRRRRAALA

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47290; Mature: 47290

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRSLLKFGSMAGVMALAGQSPVARAADSGKGPIKVGILHSLSGTMAISETSLKDTALM
CCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCEEEE
TIADINKNGGVLGRPLQPVVVDPASNWPLFAEKARQLLTQEKVACVFGCWTSVSRKSVLP
EEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHEEEHHHHHCCCHHHHH
VFEELNGLLYYPVQYEGEEMSRNVFYTGAAPNQQAIPAVEYMMSAEGGGAKRFFLLGTDY
HHHHCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCE
VYPRTTNKILRAFLKSKGVKDSDIQEVYTPFGHSDYQTIVANIKTFAQGGKTTVISTING
ECCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
DSNVPFYKELGNQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKGPANAK
CCCCCHHHHHCCCCCEECCCCEEEEECCHHHHCCCCCCHHHHHHHHEEEEEEECCCCCCH
FKEQFAAWVKSQNLPGGAKRVTNDPMEATFVGIHMWKQAVEKAKSTDVDRVRTAMIGQSV
HHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
AAPSGFTLTMDGNHHLHKPVMIGEIRGDGQFNVVWKTKTAIRAQPWSPFIAGNQGKPDVV
CCCCCCEEEECCCCCCCCCEEEEEEECCCEEEEEEEECCEEECCCCCCCEECCCCCCCHH
GSIPEFLRRRRAALA
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRRSLLKFGSMAGVMALAGQSPVARAADSGKGPIKVGILHSLSGTMAISETSLKDTALM
CCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCEEEE
TIADINKNGGVLGRPLQPVVVDPASNWPLFAEKARQLLTQEKVACVFGCWTSVSRKSVLP
EEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHEEEHHHHHCCCHHHHH
VFEELNGLLYYPVQYEGEEMSRNVFYTGAAPNQQAIPAVEYMMSAEGGGAKRFFLLGTDY
HHHHCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCE
VYPRTTNKILRAFLKSKGVKDSDIQEVYTPFGHSDYQTIVANIKTFAQGGKTTVISTING
ECCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
DSNVPFYKELGNQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKGPANAK
CCCCCHHHHHCCCCCEECCCCEEEEECCHHHHCCCCCCHHHHHHHHEEEEEEECCCCCCH
FKEQFAAWVKSQNLPGGAKRVTNDPMEATFVGIHMWKQAVEKAKSTDVDRVRTAMIGQSV
HHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
AAPSGFTLTMDGNHHLHKPVMIGEIRGDGQFNVVWKTKTAIRAQPWSPFIAGNQGKPDVV
CCCCCCEEEECCCCCCCCCEEEEEEECCCEEEEEEEECCEEECCCCCCCEECCCCCCCHH
GSIPEFLRRRRAALA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]