| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is phoA [H]
Identifier: 126453494
GI number: 126453494
Start: 369219
End: 370622
Strand: Direct
Name: phoA [H]
Synonym: BURPS1106A_0405
Alternate gene names: 126453494
Gene position: 369219-370622 (Clockwise)
Preceding gene: 126454088
Following gene: 126452050
Centisome position: 9.26
GC content: 68.66
Gene sequence:
>1404_bases ATGTCGACTATCAAGCGCATCGCGGCGGCGGCGTTCGCCGCGGCGGCCCTCTCGGGCGGTTTCGGCCACGCGGCGCACGC CGCGGGCCAGGCGAAGAACGTGATCTTCTTCCTCGGCGACGGGATGGGGCCGGCCACCGTGACGGCGAGCCGCCTCTACA AGGTCGGCGAAGCCGGCCAACTGACGATGGAAAAGCTGCCGCGCACCGCGCGCATCAAGACCTTCTCGAACGACGCGCAG ACGACGGACAGCGCACCGTCGATGGCCGCGTACATGACCGGCGTGAAGATGAACAACGAGGTGCTGTCGATGTCGCCGGA CACGCGCGCGATCGCCCCCGGCAGCGATGCGAACGGCAACAAGACGGTGAACCGCTGCGGCGTGGGCAACGGCACGCCGG CGACGACGCTGCTCGAGCTCGCGAAGGCGCGCGGCAAGGCGGTCGGCGCGATCACGACGACCGAGCTCACGCACGCGACG CCCGCGGCGACTTACTCGCACATCTGCCATCGCGACGCGCAGTACGACATTGCCGCGCAGGCCGTGCCGGGCGGCGCGGG CTACAACGCGGCGCTCGGCGACGGCGTCGACGTGCTGATGGGCGGCGGCCGCAATCACTGGACGCCGTACGATCCGCTCG CCAACAGGCGCGGCCGCGCGGACGGGCGCAACCTGCTCGCCGAGCTGCAGGCGAAGGGCTACGCGGTGGTCGCGACGAAG GATCAGCTCGCGCAGGCGGGCGCGGGCAAGCTGATCGGCCTTTTCAGCACGACGAGCCATCTCGAATACGAGCTCGACCG CGTCGCGGGCAAGGGCGAGGGCGCGACGCAGCCGAGCCTCGCGGAGATGACCGCGAAGGCGATCGACGTGTTGCGGAAGA ATCCGAACGGCTATTTCCTGATGGTCGAAGGCGGGCGCATCGACCACGCGCTGCACGGCACGAACGCGAAGCGCGCGCTC GAAGACACGGTGGCGTTCGACGAGGCGATCCGCACCGCGCTCGCGAAGGTCGATCTATCGGATACGCTGATCGTCGTGAC GGCCGATCACGATCACACGATGACGATCAACGGCTATTCGAAGCGCGGCAATCCGGTGCTCGACATCAGCCGCAACTATC GCGACGGCCAGCCGAACAAGGACGCGGACGGCAACCCGTACACGACGCTCGTGTTCGGCAATGGCGCGAACCGGCCGAAC GTGCGCGTGCCGGTGGATTCGTCGACGGCGACGAACGACGCGTATCTGCAGGAAGTCGGCGTGCGCATGGGCAGCGCGGG TTCCGAGACGCATGGCGGCGGCGACGTGATGCTGTTCGCCGACGGCGCCGGCGCGAAGGCGTTCAAGGGCACGCTCGACA ACACGAAGGTGTTCGGCCTCGTGAAGGCCGCGTTCGGGTTCTGA
Upstream 100 bases:
>100_bases ACGGCTTTCACGGCGTGATCGAGAACAACAAGGTGTTCGAGCTCGTGCGCGGCGCGGCGCAGCTCTGAGCGCGGCTTGAC GGGAAACAGGGGAATACAGG
Downstream 100 bases:
>100_bases GCGCAATGGCTGCGATGCGAACGTTCGCGATGAAGCTCGATGCCGTGCGGCGCGCATGCGCGGCGCTCGGCGGCGCGGCC GTGCTCGCCGCCGCGCCGGC
Product: alkaline phosphatase family protein
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MSTIKRIAAAAFAAAALSGGFGHAAHAAGQAKNVIFFLGDGMGPATVTASRLYKVGEAGQLTMEKLPRTARIKTFSNDAQ TTDSAPSMAAYMTGVKMNNEVLSMSPDTRAIAPGSDANGNKTVNRCGVGNGTPATTLLELAKARGKAVGAITTTELTHAT PAATYSHICHRDAQYDIAAQAVPGGAGYNAALGDGVDVLMGGGRNHWTPYDPLANRRGRADGRNLLAELQAKGYAVVATK DQLAQAGAGKLIGLFSTTSHLEYELDRVAGKGEGATQPSLAEMTAKAIDVLRKNPNGYFLMVEGGRIDHALHGTNAKRAL EDTVAFDEAIRTALAKVDLSDTLIVVTADHDHTMTINGYSKRGNPVLDISRNYRDGQPNKDADGNPYTTLVFGNGANRPN VRVPVDSSTATNDAYLQEVGVRMGSAGSETHGGGDVMLFADGAGAKAFKGTLDNTKVFGLVKAAFGF
Sequences:
>Translated_467_residues MSTIKRIAAAAFAAAALSGGFGHAAHAAGQAKNVIFFLGDGMGPATVTASRLYKVGEAGQLTMEKLPRTARIKTFSNDAQ TTDSAPSMAAYMTGVKMNNEVLSMSPDTRAIAPGSDANGNKTVNRCGVGNGTPATTLLELAKARGKAVGAITTTELTHAT PAATYSHICHRDAQYDIAAQAVPGGAGYNAALGDGVDVLMGGGRNHWTPYDPLANRRGRADGRNLLAELQAKGYAVVATK DQLAQAGAGKLIGLFSTTSHLEYELDRVAGKGEGATQPSLAEMTAKAIDVLRKNPNGYFLMVEGGRIDHALHGTNAKRAL EDTVAFDEAIRTALAKVDLSDTLIVVTADHDHTMTINGYSKRGNPVLDISRNYRDGQPNKDADGNPYTTLVFGNGANRPN VRVPVDSSTATNDAYLQEVGVRMGSAGSETHGGGDVMLFADGAGAKAFKGTLDNTKVFGLVKAAFGF >Mature_466_residues STIKRIAAAAFAAAALSGGFGHAAHAAGQAKNVIFFLGDGMGPATVTASRLYKVGEAGQLTMEKLPRTARIKTFSNDAQT TDSAPSMAAYMTGVKMNNEVLSMSPDTRAIAPGSDANGNKTVNRCGVGNGTPATTLLELAKARGKAVGAITTTELTHATP AATYSHICHRDAQYDIAAQAVPGGAGYNAALGDGVDVLMGGGRNHWTPYDPLANRRGRADGRNLLAELQAKGYAVVATKD QLAQAGAGKLIGLFSTTSHLEYELDRVAGKGEGATQPSLAEMTAKAIDVLRKNPNGYFLMVEGGRIDHALHGTNAKRALE DTVAFDEAIRTALAKVDLSDTLIVVTADHDHTMTINGYSKRGNPVLDISRNYRDGQPNKDADGNPYTTLVFGNGANRPNV RVPVDSSTATNDAYLQEVGVRMGSAGSETHGGGDVMLFADGAGAKAFKGTLDNTKVFGLVKAAFGF
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266292, Length=455, Percent_Identity=35.8241758241758, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI116734717, Length=458, Percent_Identity=36.2445414847162, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI94721246, Length=455, Percent_Identity=35.3846153846154, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI157266296, Length=455, Percent_Identity=35.1648351648352, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI294660770, Length=453, Percent_Identity=35.5408388520971, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI294660772, Length=421, Percent_Identity=33.4916864608076, Blast_Score=190, Evalue=3e-48, Organism=Escherichia coli, GI48994877, Length=474, Percent_Identity=29.535864978903, Blast_Score=131, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6320689, Length=349, Percent_Identity=32.378223495702, Blast_Score=140, Evalue=4e-34, Organism=Drosophila melanogaster, GI21355151, Length=455, Percent_Identity=34.5054945054945, Blast_Score=228, Evalue=5e-60, Organism=Drosophila melanogaster, GI21358067, Length=470, Percent_Identity=35.531914893617, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI21355149, Length=466, Percent_Identity=34.3347639484979, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI85725200, Length=456, Percent_Identity=33.9912280701754, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI85815833, Length=456, Percent_Identity=33.9912280701754, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI21355981, Length=457, Percent_Identity=35.2297592997812, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI19921912, Length=472, Percent_Identity=34.5338983050847, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI24585213, Length=462, Percent_Identity=33.1168831168831, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI18859923, Length=446, Percent_Identity=33.6322869955157, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24651554, Length=474, Percent_Identity=33.1223628691983, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24657835, Length=470, Percent_Identity=33.8297872340426, Blast_Score=194, Evalue=8e-50, Organism=Drosophila melanogaster, GI24657827, Length=479, Percent_Identity=33.4029227557411, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI24657842, Length=471, Percent_Identity=32.484076433121, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI24651556, Length=461, Percent_Identity=32.5379609544469, Blast_Score=179, Evalue=2e-45,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 48616; Mature: 48485
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIKRIAAAAFAAAALSGGFGHAAHAAGQAKNVIFFLGDGMGPATVTASRLYKVGEAGQ CCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCC LTMEKLPRTARIKTFSNDAQTTDSAPSMAAYMTGVKMNNEVLSMSPDTRAIAPGSDANGN HHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCEECCCEEEECCCCCEECCCCCCCCC KTVNRCGVGNGTPATTLLELAKARGKAVGAITTTELTHATPAATYSHICHRDAQYDIAAQ CCHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEE AVPGGAGYNAALGDGVDVLMGGGRNHWTPYDPLANRRGRADGRNLLAELQAKGYAVVATK ECCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEEEEEEH DQLAQAGAGKLIGLFSTTSHLEYELDRVAGKGEGATQPSLAEMTAKAIDVLRKNPNGYFL HHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE MVEGGRIDHALHGTNAKRALEDTVAFDEAIRTALAKVDLSDTLIVVTADHDHTMTINGYS EEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCC KRGNPVLDISRNYRDGQPNKDADGNPYTTLVFGNGANRPNVRVPVDSSTATNDAYLQEVG CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHH VRMGSAGSETHGGGDVMLFADGAGAKAFKGTLDNTKVFGLVKAAFGF HHCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure STIKRIAAAAFAAAALSGGFGHAAHAAGQAKNVIFFLGDGMGPATVTASRLYKVGEAGQ CHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCC LTMEKLPRTARIKTFSNDAQTTDSAPSMAAYMTGVKMNNEVLSMSPDTRAIAPGSDANGN HHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCEECCCEEEECCCCCEECCCCCCCCC KTVNRCGVGNGTPATTLLELAKARGKAVGAITTTELTHATPAATYSHICHRDAQYDIAAQ CCHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEE AVPGGAGYNAALGDGVDVLMGGGRNHWTPYDPLANRRGRADGRNLLAELQAKGYAVVATK ECCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEEEEEEH DQLAQAGAGKLIGLFSTTSHLEYELDRVAGKGEGATQPSLAEMTAKAIDVLRKNPNGYFL HHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE MVEGGRIDHALHGTNAKRALEDTVAFDEAIRTALAKVDLSDTLIVVTADHDHTMTINGYS EEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCC KRGNPVLDISRNYRDGQPNKDADGNPYTTLVFGNGANRPNVRVPVDSSTATNDAYLQEVG CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHH VRMGSAGSETHGGGDVMLFADGAGAKAFKGTLDNTKVFGLVKAAFGF HHCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]