| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452050
Identifier: 126452050
GI number: 126452050
Start: 370628
End: 371485
Strand: Direct
Name: 126452050
Synonym: BURPS1106A_0406
Alternate gene names: NA
Gene position: 370628-371485 (Clockwise)
Preceding gene: 126453494
Following gene: 126453137
Centisome position: 9.29
GC content: 73.31
Gene sequence:
>858_bases ATGGCTGCGATGCGAACGTTCGCGATGAAGCTCGATGCCGTGCGGCGCGCATGCGCGGCGCTCGGCGGCGCGGCCGTGCT CGCCGCCGCGCCGGCGCTCGCCGCGCCTCCCGCGCCTCCCGCGCCTCTCGCGCCTCTCGCGCCCGACGGGGGCCGCGCAC CCGATCTCGATGCGGTGCTGCTGCACGAAAGCATGACGGTGAGCGCGGACGGCGTGACGCGCACCGTCACGTATCGTGAG CGGATGGTGCGGCGCGACGGGCACGTCTGGATCGAACGCGTGCCGCCATCCGGCGCGAAGCGCGCGCATGCCGGCGGCGC GCATGCGCACGAGGGCTTGGACGCCGCGCGCACGCCGCCGTCGCGTGGCGGCGCGCGTCCCGCCGCGGCGGCGGCCGATG CGCACGCCGGCCACCGGCATTTCGATTTCGACGCGGCCGCGCGGCACGTGACGAACGACGGCGGCAGGATCGGCGTCGAA TACGTCGATGCGGCGCAGCGCACGGTGGTTGCGGTGCCGCCCGCCGAGTACGAGACGACGGGTTTCGACGGCTCGTGGGA CAACGCGTTCTACATCACGCCGCCGTCGCAACTGAAGCGCCTTGCCGCGCAGTCGAAGCCGGGCCCCGCGCCCGGCACGC GCTGGTACGAGCAGACGGTCGGCGCGCCGCGCGCGCAGGGCACCAATCGCGTTCTGTGGAGCGATGCGTTGCAGGCGCCG CTCGTCGTCGAATACCGCAGCGCGGACGGCCATGCGTCGCGCAAGCTGACGCTCACGCCCGCGCCGCGTGCGAACGCACT GCCGTGGCGGCAGTTGCAATCGTATACGCGCAAGGCGTATGCGGACTATCTCGATTGA
Upstream 100 bases:
>100_bases TGCTGTTCGCCGACGGCGCCGGCGCGAAGGCGTTCAAGGGCACGCTCGACAACACGAAGGTGTTCGGCCTCGTGAAGGCC GCGTTCGGGTTCTGAGCGCA
Downstream 100 bases:
>100_bases CGTGCGGATTCGTTTCGCGCGGCAAGCGTCGCGCATCGCGCGCGACGCGAAGTGAATCGGGCCGGACGGCGCCAAGCGTG CGCGGCGCGATGAAGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MAAMRTFAMKLDAVRRACAALGGAAVLAAAPALAAPPAPPAPLAPLAPDGGRAPDLDAVLLHESMTVSADGVTRTVTYRE RMVRRDGHVWIERVPPSGAKRAHAGGAHAHEGLDAARTPPSRGGARPAAAAADAHAGHRHFDFDAAARHVTNDGGRIGVE YVDAAQRTVVAVPPAEYETTGFDGSWDNAFYITPPSQLKRLAAQSKPGPAPGTRWYEQTVGAPRAQGTNRVLWSDALQAP LVVEYRSADGHASRKLTLTPAPRANALPWRQLQSYTRKAYADYLD
Sequences:
>Translated_285_residues MAAMRTFAMKLDAVRRACAALGGAAVLAAAPALAAPPAPPAPLAPLAPDGGRAPDLDAVLLHESMTVSADGVTRTVTYRE RMVRRDGHVWIERVPPSGAKRAHAGGAHAHEGLDAARTPPSRGGARPAAAAADAHAGHRHFDFDAAARHVTNDGGRIGVE YVDAAQRTVVAVPPAEYETTGFDGSWDNAFYITPPSQLKRLAAQSKPGPAPGTRWYEQTVGAPRAQGTNRVLWSDALQAP LVVEYRSADGHASRKLTLTPAPRANALPWRQLQSYTRKAYADYLD >Mature_284_residues AAMRTFAMKLDAVRRACAALGGAAVLAAAPALAAPPAPPAPLAPLAPDGGRAPDLDAVLLHESMTVSADGVTRTVTYRER MVRRDGHVWIERVPPSGAKRAHAGGAHAHEGLDAARTPPSRGGARPAAAAADAHAGHRHFDFDAAARHVTNDGGRIGVEY VDAAQRTVVAVPPAEYETTGFDGSWDNAFYITPPSQLKRLAAQSKPGPAPGTRWYEQTVGAPRAQGTNRVLWSDALQAPL VVEYRSADGHASRKLTLTPAPRANALPWRQLQSYTRKAYADYLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30179; Mature: 30048
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMRTFAMKLDAVRRACAALGGAAVLAAAPALAAPPAPPAPLAPLAPDGGRAPDLDAVL CCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEE LHESMTVSADGVTRTVTYRERMVRRDGHVWIERVPPSGAKRAHAGGAHAHEGLDAARTPP EECCEEEECCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHCCCCHHCCCC SRGGARPAAAAADAHAGHRHFDFDAAARHVTNDGGRIGVEYVDAAQRTVVAVPPAEYETT CCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEHHEECCCCCEEEEECCCCCCCC GFDGSWDNAFYITPPSQLKRLAAQSKPGPAPGTRWYEQTVGAPRAQGTNRVLWSDALQAP CCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEEHHHCCCC LVVEYRSADGHASRKLTLTPAPRANALPWRQLQSYTRKAYADYLD EEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAMRTFAMKLDAVRRACAALGGAAVLAAAPALAAPPAPPAPLAPLAPDGGRAPDLDAVL CHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEE LHESMTVSADGVTRTVTYRERMVRRDGHVWIERVPPSGAKRAHAGGAHAHEGLDAARTPP EECCEEEECCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHCCCCHHCCCC SRGGARPAAAAADAHAGHRHFDFDAAARHVTNDGGRIGVEYVDAAQRTVVAVPPAEYETT CCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEHHEECCCCCEEEEECCCCCCCC GFDGSWDNAFYITPPSQLKRLAAQSKPGPAPGTRWYEQTVGAPRAQGTNRVLWSDALQAP CCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEEHHHCCCC LVVEYRSADGHASRKLTLTPAPRANALPWRQLQSYTRKAYADYLD EEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA