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The map label for this gene is benA [H]

Identifier: 126453073

GI number: 126453073

Start: 3866697

End: 3867761

Strand: Direct

Name: benA [H]

Synonym: BURPS1106A_3962

Alternate gene names: 126453073

Gene position: 3866697-3867761 (Clockwise)

Preceding gene: 126452282

Following gene: 126453398

Centisome position: 96.95

GC content: 65.26

Gene sequence:

>1065_bases
ATGAATTTCGATACGGACCTCCTCCATCGCCACTGGCATCTCGGCTGTCACCGCCGGGAGCTTCCGAACGACGGCGATTT
CGTGCGCTTCGACACCGCAATCGGCGAAATCGTGATCTTCAACGATGCGGGCGAGCTCGTCGCGTTCGACAACCGCTGCC
CGCACCGCGGCGCCCGCATGTATGTGGACGACAGCGGCAACCAGCCGGCGAGCTGCCCGTACCACGGCTGGACGTATCGC
GAGGGCCGGCTGCTGATACCGGGCCGCGAGCGCTTCGACGGCTGCGCGCTCGAGCGCGCGAAGCTGCGTACGTTCGCCGT
CGACTGGTGCGGCGACTTCCTGTTCTTTGCCGTCCACCCGCAGACCGATCTCTACACGCAGCTCGGCAGATTCGCCGAGG
CCGTCGAGAACATCTCGTTCAACATCGATCGACGCCTCGACTTGAACCGCTACGATTTCGAATGCTACTGGCCGCTCGCG
ATCGAGAACGCGCTCGAGCCGTACCACATCGGCGCCGTTCATCCGCAGACACTCGCCACGCTCGGGCTCGAAGACGGCGA
GAACGTGTTCGACGGCGTCAATTGCGCATGGTACGCCCCCGTCGGCGCGAGCCGGCAGCGCAATCAGCTCGCCCGGCTCA
AGCGCTTCTTCAATCTCGATTACCAATACGAAGGGTACGCGAGCATCTATCTGTTTCCGTTCACGATGATCTCGTCGACG
TACGGCTACTCGTATTCGCTGCAGCATTTTCTGCCCGCGGGCGGCGGCGGCGATCGCACGCGCTTCACTAGCCGGCTTTA
TGCGGCGCCCGCGGCGAGCGAACAGGCGGCGCAGGCGCTCGGCGCCTTCTTCGAATCGACGCGAGACGTCAATCGGCGGG
TGTTCGAAGAGGACCACGCGATCTGCAAGCGAATGCCGAGGAACGCGTGGTCGATGGCGCCGCTCGCGTGCGCGGCCGAC
ACCGAAGCGAAAATCGATCATTTCCGCCGCGCGTGCCGCACGTTCGCCGCGTCGCGCGCCGCGCTTCCCGTCGTCGACGC
GACACGCGAGGCGGCGGCCGGGTAA

Upstream 100 bases:

>100_bases
AGGATCGGCGCCGGCGCGAAGATCGGTGCCGGCGCGACCGTCATGCGCTCGGCGCCCGAAAACGCCGTGCTCTATACGAT
GCCCGCGAAGAAGCTCTGAC

Downstream 100 bases:

>100_bases
CGGCCGCCGCGCACGCCCGAACCCACGGCCTTCCGGGGCGACGGTTGCGCCGGCGTCCGCCGCGCCGGCTGCGGCTCGAT
CAAAATCCCTTCCAGTAATC

Product: Rieske family iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNFDTDLLHRHWHLGCHRRELPNDGDFVRFDTAIGEIVIFNDAGELVAFDNRCPHRGARMYVDDSGNQPASCPYHGWTYR
EGRLLIPGRERFDGCALERAKLRTFAVDWCGDFLFFAVHPQTDLYTQLGRFAEAVENISFNIDRRLDLNRYDFECYWPLA
IENALEPYHIGAVHPQTLATLGLEDGENVFDGVNCAWYAPVGASRQRNQLARLKRFFNLDYQYEGYASIYLFPFTMISST
YGYSYSLQHFLPAGGGGDRTRFTSRLYAAPAASEQAAQALGAFFESTRDVNRRVFEEDHAICKRMPRNAWSMAPLACAAD
TEAKIDHFRRACRTFAASRAALPVVDATREAAAG

Sequences:

>Translated_354_residues
MNFDTDLLHRHWHLGCHRRELPNDGDFVRFDTAIGEIVIFNDAGELVAFDNRCPHRGARMYVDDSGNQPASCPYHGWTYR
EGRLLIPGRERFDGCALERAKLRTFAVDWCGDFLFFAVHPQTDLYTQLGRFAEAVENISFNIDRRLDLNRYDFECYWPLA
IENALEPYHIGAVHPQTLATLGLEDGENVFDGVNCAWYAPVGASRQRNQLARLKRFFNLDYQYEGYASIYLFPFTMISST
YGYSYSLQHFLPAGGGGDRTRFTSRLYAAPAASEQAAQALGAFFESTRDVNRRVFEEDHAICKRMPRNAWSMAPLACAAD
TEAKIDHFRRACRTFAASRAALPVVDATREAAAG
>Mature_354_residues
MNFDTDLLHRHWHLGCHRRELPNDGDFVRFDTAIGEIVIFNDAGELVAFDNRCPHRGARMYVDDSGNQPASCPYHGWTYR
EGRLLIPGRERFDGCALERAKLRTFAVDWCGDFLFFAVHPQTDLYTQLGRFAEAVENISFNIDRRLDLNRYDFECYWPLA
IENALEPYHIGAVHPQTLATLGLEDGENVFDGVNCAWYAPVGASRQRNQLARLKRFFNLDYQYEGYASIYLFPFTMISST
YGYSYSLQHFLPAGGGGDRTRFTSRLYAAPAASEQAAQALGAFFESTRDVNRRVFEEDHAICKRMPRNAWSMAPLACAAD
TEAKIDHFRRACRTFAASRAALPVVDATREAAAG

Specific function: Degradation of benzoate to 2-hydro-1,2-dihydroxybenzoate (DHB) [H]

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017639
- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR015879
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske; PF00848 Ring_hydroxyl_A [H]

EC number: =1.14.12.10 [H]

Molecular weight: Translated: 40176; Mature: 40176

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00570 RING_HYDROXYL_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFDTDLLHRHWHLGCHRRELPNDGDFVRFDTAIGEIVIFNDAGELVAFDNRCPHRGARM
CCCCHHHHHHHHHCCCHHHCCCCCCCEEEEECCCCEEEEECCCCCEEEECCCCCCCCCEE
YVDDSGNQPASCPYHGWTYREGRLLIPGRERFDGCALERAKLRTFAVDWCGDFLFFAVHP
EEECCCCCCCCCCCCCEEECCCEEECCCCCCCCCHHHHHHHHHHEEHHHHCCEEEEEECC
QTDLYTQLGRFAEAVENISFNIDRRLDLNRYDFECYWPLAIENALEPYHIGAVHPQTLAT
CHHHHHHHHHHHHHHHHCCCCEECEECCCCCCEEEEECHHHHCCCCCEEECCCCHHHHHH
LGLEDGENVFDGVNCAWYAPVGASRQRNQLARLKRFFNLDYQYEGYASIYLFPFTMISST
CCCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEECCEEEEEEEEHHHHHHC
YGYSYSLQHFLPAGGGGDRTRFTSRLYAAPAASEQAAQALGAFFESTRDVNRRVFEEDHA
CCCCEEHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICKRMPRNAWSMAPLACAADTEAKIDHFRRACRTFAASRAALPVVDATREAAAG
HHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHCCC
>Mature Secondary Structure
MNFDTDLLHRHWHLGCHRRELPNDGDFVRFDTAIGEIVIFNDAGELVAFDNRCPHRGARM
CCCCHHHHHHHHHCCCHHHCCCCCCCEEEEECCCCEEEEECCCCCEEEECCCCCCCCCEE
YVDDSGNQPASCPYHGWTYREGRLLIPGRERFDGCALERAKLRTFAVDWCGDFLFFAVHP
EEECCCCCCCCCCCCCEEECCCEEECCCCCCCCCHHHHHHHHHHEEHHHHCCEEEEEECC
QTDLYTQLGRFAEAVENISFNIDRRLDLNRYDFECYWPLAIENALEPYHIGAVHPQTLAT
CHHHHHHHHHHHHHHHHCCCCEECEECCCCCCEEEEECHHHHCCCCCEEECCCCHHHHHH
LGLEDGENVFDGVNCAWYAPVGASRQRNQLARLKRFFNLDYQYEGYASIYLFPFTMISST
CCCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEECCEEEEEEEEHHHHHHC
YGYSYSLQHFLPAGGGGDRTRFTSRLYAAPAASEQAAQALGAFFESTRDVNRRVFEEDHA
CCCCEEHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICKRMPRNAWSMAPLACAADTEAKIDHFRRACRTFAASRAALPVVDATREAAAG
HHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1885518 [H]