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The map label for this gene is 126453046

Identifier: 126453046

GI number: 126453046

Start: 1753644

End: 1754651

Strand: Direct

Name: 126453046

Synonym: BURPS1106A_1792

Alternate gene names: NA

Gene position: 1753644-1754651 (Clockwise)

Preceding gene: 126455026

Following gene: 126452133

Centisome position: 43.97

GC content: 72.92

Gene sequence:

>1008_bases
ATGTCTAGCGCGGCGCTCTGGGCGCTCGCGCTCGCGCTGCTGTGCGTCGCCGGGGCGTTCGCGCTATGGCGGCGCGGCGA
GGCGAACAGGGAGCGCGCGCATGCGGCGCGCTACATCGACAGCCGGCTCGAGCCCGGCGCGCGCGCGAGCGCGCAGCCGA
AGATGCCGGCCGCGGCCGAGCCCAAGCGCGCGGCGCCCATGCCGGCCGCGGGCGCGGCGGGCGGCGCGCGCGCGGAGAAG
CCCGCCGAAGGGCTCGCGCGCTGGCGTGAGCGCGCGGCCGACGCATGGCTGAACGTGTCGAACCGCGCGGGCGTGTCCGA
GATCCGCGCGCCGCTCGCCGCGCTCGCCGCGACGACGGCCGTCGCCACGCTGTGGGCGGGCCTGCGCGGCGGGCTGCTCG
CCGCCTGCGCGGCGCTCGTCGCGGGCGCGACGCTCGCGGTCTTCTGGCTCGTGTCGCGGATGCAGAAGCGGCGGCTGCGG
ATCGTGCGCCAACTGCCGTCGTTCCTCGACGGCATCGTGCGTCTCGTCACGCTCGGCAACAGCGTGCCGGCCGCGTTCCA
GGCGACGCTGCAGACGACCGAGGCGCCGCTGCGCGGCTGTCTCGATCACGTGTCGCGGATGCTGCGCTCGGGCGTCGAGA
TCGACCGTGCGATGGTGTCCATCGCGGCGCTCTACCGGATCAAGGAATTCGAGCTCGTCGGCTCGGTGCTGCGGTTGTCC
GTCAAGTACGGCGGCCGCGCCGACGTGATGCTCGACCGAATGGCCGTGTTCATGCGCGATCTCGAGCAGGCCGAGCGCGA
GCTCGTCGCGATGTCGGCGGAGACGCGGCTGTCGGCATGGGTGCTCGGCGCGCTGCCCGTGGGCATCGGCAGCTTCGTGA
TCGCGACGAATCCGAAATATTTCAGCGCGATGTGGCTTGACCCGACGGGCCGCCAGCTCGTGTATCTCGCATTCATCCTG
CAAATCGCCGGCGGCTACTGGCTGTACCGGCTCGCCCGATTGAGGTGA

Upstream 100 bases:

>100_bases
GGCATCCATCCGCATTCGCCGAAGCTCGCGCGCTTCAGGCAGGCACTGTCGGGCGGCGGCTTCGGCGGCGGCGAGCCGTA
CGGGCGCGGCGGAGGCTTCA

Downstream 100 bases:

>100_bases
CGACGATGGATCCCAGCCGCCTCGGCGCAATCGCGCTCGTTCTCGGCGCAATCGGCGTGCTGATGCTCGCCGCGCTCGCG
ATCATGCAGGCCGTGCTCGC

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Type II Secretion System; Type II Secretion System Protein F Domain; Tight Adherence TadB Related Transmembrane Protein; TadB Protein; Flp Type Pilus Assembly Protein; Tight Adherence TadB-Related Transmembrane Protein; Tad Secretion System Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Pilus Assembly Protein Tadb; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Integral Membrane Subunit; Type IV Pilus Assembly Protein; Bacterial Type II Secretion System Protein F Domain

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSSAALWALALALLCVAGAFALWRRGEANRERAHAARYIDSRLEPGARASAQPKMPAAAEPKRAAPMPAAGAAGGARAEK
PAEGLARWRERAADAWLNVSNRAGVSEIRAPLAALAATTAVATLWAGLRGGLLAACAALVAGATLAVFWLVSRMQKRRLR
IVRQLPSFLDGIVRLVTLGNSVPAAFQATLQTTEAPLRGCLDHVSRMLRSGVEIDRAMVSIAALYRIKEFELVGSVLRLS
VKYGGRADVMLDRMAVFMRDLEQAERELVAMSAETRLSAWVLGALPVGIGSFVIATNPKYFSAMWLDPTGRQLVYLAFIL
QIAGGYWLYRLARLR

Sequences:

>Translated_335_residues
MSSAALWALALALLCVAGAFALWRRGEANRERAHAARYIDSRLEPGARASAQPKMPAAAEPKRAAPMPAAGAAGGARAEK
PAEGLARWRERAADAWLNVSNRAGVSEIRAPLAALAATTAVATLWAGLRGGLLAACAALVAGATLAVFWLVSRMQKRRLR
IVRQLPSFLDGIVRLVTLGNSVPAAFQATLQTTEAPLRGCLDHVSRMLRSGVEIDRAMVSIAALYRIKEFELVGSVLRLS
VKYGGRADVMLDRMAVFMRDLEQAERELVAMSAETRLSAWVLGALPVGIGSFVIATNPKYFSAMWLDPTGRQLVYLAFIL
QIAGGYWLYRLARLR
>Mature_334_residues
SSAALWALALALLCVAGAFALWRRGEANRERAHAARYIDSRLEPGARASAQPKMPAAAEPKRAAPMPAAGAAGGARAEKP
AEGLARWRERAADAWLNVSNRAGVSEIRAPLAALAATTAVATLWAGLRGGLLAACAALVAGATLAVFWLVSRMQKRRLRI
VRQLPSFLDGIVRLVTLGNSVPAAFQATLQTTEAPLRGCLDHVSRMLRSGVEIDRAMVSIAALYRIKEFELVGSVLRLSV
KYGGRADVMLDRMAVFMRDLEQAERELVAMSAETRLSAWVLGALPVGIGSFVIATNPKYFSAMWLDPTGRQLVYLAFILQ
IAGGYWLYRLARLR

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36165; Mature: 36034

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAALWALALALLCVAGAFALWRRGEANRERAHAARYIDSRLEPGARASAQPKMPAAAE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PKRAAPMPAAGAAGGARAEKPAEGLARWRERAADAWLNVSNRAGVSEIRAPLAALAATTA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VATLWAGLRGGLLAACAALVAGATLAVFWLVSRMQKRRLRIVRQLPSFLDGIVRLVTLGN
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SVPAAFQATLQTTEAPLRGCLDHVSRMLRSGVEIDRAMVSIAALYRIKEFELVGSVLRLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKYGGRADVMLDRMAVFMRDLEQAERELVAMSAETRLSAWVLGALPVGIGSFVIATNPKY
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCE
FSAMWLDPTGRQLVYLAFILQIAGGYWLYRLARLR
EEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
SSAALWALALALLCVAGAFALWRRGEANRERAHAARYIDSRLEPGARASAQPKMPAAAE
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC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EEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA