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The map label for this gene is 126452133

Identifier: 126452133

GI number: 126452133

Start: 1754657

End: 1755667

Strand: Direct

Name: 126452133

Synonym: BURPS1106A_1793

Alternate gene names: NA

Gene position: 1754657-1755667 (Clockwise)

Preceding gene: 126453046

Following gene: 126453745

Centisome position: 43.99

GC content: 73.19

Gene sequence:

>1011_bases
ATGGATCCCAGCCGCCTCGGCGCAATCGCGCTCGTTCTCGGCGCAATCGGCGTGCTGATGCTCGCCGCGCTCGCGATCAT
GCAGGCCGTGCTCGCGCGGCGCACCGGCCGCACGCTCGCGGACGCGCTCGATCAGCGCGCCGCCGCGTTGGAGGCGGCCG
CCGCGCGGGTCGCGGCGGGGGCGGCCGGCGCGGCGCGCGCGGGCATGCCCGAGGCGGCGCCTGACGCGCGCCGTCCGCGC
TTCGCGGCGCTGCTCGATCGCGCGGGCCGGTTCGGAATGCGGCTGCTCGATACGCGGCTCGGCAAGCAGATCGTCGCCGA
CGAAGACCGGATGCTGCTCGAACAGTGCGGCTACGTCGACGCGCACACGCGCGGCATCTTCCTGAGCGCGCGGATCGCGT
GTGCGATCGCGCTGCCCGCCGCCGTCGCGCTCGTCGGCGGCGAGCCGGTCCGCACGCATCTGGGCGCGTGGGTCGCGCTG
TCGGTGATCGCCGGCTTCATGCTGCCGAAGACCTACGTGCGCCGCCGCGCGGCGGCGCGCCGCCAGTCCGTCGTCGACGA
GATGCCGCTGCTCGTCGACATGCTGCGGCTCTTGCAGGGCGTCGGGCTGTCGCTCGACCAGAGCATCCAGGTCGTCACCA
ACGACTTCAGGGGGATGCTGCCCGTGCTGTCGTCGGAGCTCGGGATCGCGCAGCGGCAGTTCGTCGCGGGGCGCACGCGC
GAGCAGTCGCTGCAGCGTCTCGCGACGAGCTTCGACAACGAGGACCTGCGCGCGATCGTGCGCCTGCTGATCCAGGTCGA
CAAGCACGGCGGCGCGGTGCAGGAGCCGCTCAAGCAGTTCGGCGACCGGCTGCGCGAAGTGCGCCGCGCGATGCTGCGCG
AGCGCATCGGCCGCCTTACGGTGAAAATGACGGGCGTGATGATTCTCACGCTGCTGCCCGCGCTGTTCATCGTGACGGCG
GGGCCGGGGATGCTCGCCGTCACGCATGCGCTCACGGCCGCGCGCCGCTAG

Upstream 100 bases:

>100_bases
GGCTTGACCCGACGGGCCGCCAGCTCGTGTATCTCGCATTCATCCTGCAAATCGCCGGCGGCTACTGGCTGTACCGGCTC
GCCCGATTGAGGTGACGACG

Downstream 100 bases:

>100_bases
CCGCGCGTGCCGCCGCGCAACGAAGGAAGGAACGACATGAGACGAAACGGCTTTTCACCGATGACGACGGCGGCGCTCGC
GGCGCTTGCGCTGTCGCTCG

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System; Bacterial Type II Secretion System Protein F Domain; Type II Secretion System Protein F Subunit; Type II Secretion System Protein F Domain; TadC Protein; Tight Adherence TadC Related Transmembrane Protein; Tight Adherence TadC-Related Transmembrane Protein; Type II Secretion System Protein Transmembrane; Secretion System Protein TadC; Integral Membrane Protein; Transmembrane Type II Secretion Protein; Type II/IV Secretion System Membrane Protein; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MDPSRLGAIALVLGAIGVLMLAALAIMQAVLARRTGRTLADALDQRAAALEAAAARVAAGAAGAARAGMPEAAPDARRPR
FAALLDRAGRFGMRLLDTRLGKQIVADEDRMLLEQCGYVDAHTRGIFLSARIACAIALPAAVALVGGEPVRTHLGAWVAL
SVIAGFMLPKTYVRRRAAARRQSVVDEMPLLVDMLRLLQGVGLSLDQSIQVVTNDFRGMLPVLSSELGIAQRQFVAGRTR
EQSLQRLATSFDNEDLRAIVRLLIQVDKHGGAVQEPLKQFGDRLREVRRAMLRERIGRLTVKMTGVMILTLLPALFIVTA
GPGMLAVTHALTAARR

Sequences:

>Translated_336_residues
MDPSRLGAIALVLGAIGVLMLAALAIMQAVLARRTGRTLADALDQRAAALEAAAARVAAGAAGAARAGMPEAAPDARRPR
FAALLDRAGRFGMRLLDTRLGKQIVADEDRMLLEQCGYVDAHTRGIFLSARIACAIALPAAVALVGGEPVRTHLGAWVAL
SVIAGFMLPKTYVRRRAAARRQSVVDEMPLLVDMLRLLQGVGLSLDQSIQVVTNDFRGMLPVLSSELGIAQRQFVAGRTR
EQSLQRLATSFDNEDLRAIVRLLIQVDKHGGAVQEPLKQFGDRLREVRRAMLRERIGRLTVKMTGVMILTLLPALFIVTA
GPGMLAVTHALTAARR
>Mature_336_residues
MDPSRLGAIALVLGAIGVLMLAALAIMQAVLARRTGRTLADALDQRAAALEAAAARVAAGAAGAARAGMPEAAPDARRPR
FAALLDRAGRFGMRLLDTRLGKQIVADEDRMLLEQCGYVDAHTRGIFLSARIACAIALPAAVALVGGEPVRTHLGAWVAL
SVIAGFMLPKTYVRRRAAARRQSVVDEMPLLVDMLRLLQGVGLSLDQSIQVVTNDFRGMLPVLSSELGIAQRQFVAGRTR
EQSLQRLATSFDNEDLRAIVRLLIQVDKHGGAVQEPLKQFGDRLREVRRAMLRERIGRLTVKMTGVMILTLLPALFIVTA
GPGMLAVTHALTAARR

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36098; Mature: 36098

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPSRLGAIALVLGAIGVLMLAALAIMQAVLARRTGRTLADALDQRAAALEAAAARVAAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
AAGAARAGMPEAAPDARRPRFAALLDRAGRFGMRLLDTRLGKQIVADEDRMLLEQCGYVD
CCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
AHTRGIFLSARIACAIALPAAVALVGGEPVRTHLGAWVALSVIAGFMLPKTYVRRRAAAR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQSVVDEMPLLVDMLRLLQGVGLSLDQSIQVVTNDFRGMLPVLSSELGIAQRQFVAGRTR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
EQSLQRLATSFDNEDLRAIVRLLIQVDKHGGAVQEPLKQFGDRLREVRRAMLRERIGRLT
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKMTGVMILTLLPALFIVTAGPGMLAVTHALTAARR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDPSRLGAIALVLGAIGVLMLAALAIMQAVLARRTGRTLADALDQRAAALEAAAARVAAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
AAGAARAGMPEAAPDARRPRFAALLDRAGRFGMRLLDTRLGKQIVADEDRMLLEQCGYVD
CCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
AHTRGIFLSARIACAIALPAAVALVGGEPVRTHLGAWVALSVIAGFMLPKTYVRRRAAAR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQSVVDEMPLLVDMLRLLQGVGLSLDQSIQVVTNDFRGMLPVLSSELGIAQRQFVAGRTR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
EQSLQRLATSFDNEDLRAIVRLLIQVDKHGGAVQEPLKQFGDRLREVRRAMLRERIGRLT
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKMTGVMILTLLPALFIVTAGPGMLAVTHALTAARR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA