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The map label for this gene is 126453015

Identifier: 126453015

GI number: 126453015

Start: 3145872

End: 3146432

Strand: Reverse

Name: 126453015

Synonym: BURPS1106A_3232

Alternate gene names: NA

Gene position: 3146432-3145872 (Counterclockwise)

Preceding gene: 126452228

Following gene: 126453636

Centisome position: 78.89

GC content: 72.37

Gene sequence:

>561_bases
ATGCGAGCGGAGCGTGACAGGTGGGCAACGGCGGGCTTCGTGCTCGTCGAAGTGATGGCTGCGCTGATGCTCGTGGCGCT
TGCCGCGATGCTGACCGCGCCGACGCTCGCCGGCGCTCGAATGCGCGATCGAGTGGACGCGCGGGCGCGCGTGTTCGGCG
CATTGCTCGCCTATGCGCGCGGCGAAGCGGTCAGGCTCGGCGCGCGCGTGGTGCTGTGCCGCAGCGATGCGACCGCGAAA
TGCATTGCGGCGGGGCGGCCATGCGGTGGCGGGGCGGCCGATTGGTCGTGCGGCTGGGCCGTCGCCGCCGCGGATGGCGA
ACGCGGTACGCGCCTGTTGCGGCGCATTGCGCCCGATGCCCGAGTGGCCGTGACGGGCACGACTGTCGATGTCGTGTTCA
CGCCGCCCGCGGGCCAGGTGATCGGCGGCTTCCGAAGTTTCGAGTTTGCGCCGGCAGACGCATCGGGCGCATGGCGCGGG
GAACGCTGGCGCCGCTGCCTGCGCATCGCGGCGGGTGGTCGCGTGCGATTCGCCGAGGGCGGTTGCGGAGCGTCGACATG
A

Upstream 100 bases:

>100_bases
TGTCGTGTGCCCGGTCGCGGCGCGCGACTCGGCCATTCGGCGGATGGTCGGCGCTTGCCTGCACGCGTAGAGTCGGCGCA
TCGGATTCAAGGAGAGCGCG

Downstream 100 bases:

>100_bases
CATGTTGCCGCTCGATGCGTGGGAGCACGTTGCTCGAGGCGGCGATCGCGTGCGCGCTGCTCGCGGTTGCGTCGCTCGGT
GTGGTGGCGGCGTTGCTCGC

Product: putative type IV pilus protein

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein FimT-Like; Tfp Pilus Assembly Protein FimT; Pili Retraction Protein PilT

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRAERDRWATAGFVLVEVMAALMLVALAAMLTAPTLAGARMRDRVDARARVFGALLAYARGEAVRLGARVVLCRSDATAK
CIAAGRPCGGGAADWSCGWAVAAADGERGTRLLRRIAPDARVAVTGTTVDVVFTPPAGQVIGGFRSFEFAPADASGAWRG
ERWRRCLRIAAGGRVRFAEGGCGAST

Sequences:

>Translated_186_residues
MRAERDRWATAGFVLVEVMAALMLVALAAMLTAPTLAGARMRDRVDARARVFGALLAYARGEAVRLGARVVLCRSDATAK
CIAAGRPCGGGAADWSCGWAVAAADGERGTRLLRRIAPDARVAVTGTTVDVVFTPPAGQVIGGFRSFEFAPADASGAWRG
ERWRRCLRIAAGGRVRFAEGGCGAST
>Mature_186_residues
MRAERDRWATAGFVLVEVMAALMLVALAAMLTAPTLAGARMRDRVDARARVFGALLAYARGEAVRLGARVVLCRSDATAK
CIAAGRPCGGGAADWSCGWAVAAADGERGTRLLRRIAPDARVAVTGTTVDVVFTPPAGQVIGGFRSFEFAPADASGAWRG
ERWRRCLRIAAGGRVRFAEGGCGAST

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19468; Mature: 19468

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAERDRWATAGFVLVEVMAALMLVALAAMLTAPTLAGARMRDRVDARARVFGALLAYAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHC
GEAVRLGARVVLCRSDATAKCIAAGRPCGGGAADWSCGWAVAAADGERGTRLLRRIAPDA
CCEEEECEEEEEECCCCCEEHEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCC
RVAVTGTTVDVVFTPPAGQVIGGFRSFEFAPADASGAWRGERWRRCLRIAAGGRVRFAEG
EEEEECCEEEEEECCCCCHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECC
GCGAST
CCCCCC
>Mature Secondary Structure
MRAERDRWATAGFVLVEVMAALMLVALAAMLTAPTLAGARMRDRVDARARVFGALLAYAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHC
GEAVRLGARVVLCRSDATAKCIAAGRPCGGGAADWSCGWAVAAADGERGTRLLRRIAPDA
CCEEEECEEEEEECCCCCEEHEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCC
RVAVTGTTVDVVFTPPAGQVIGGFRSFEFAPADASGAWRGERWRRCLRIAAGGRVRFAEG
EEEEECCEEEEEECCCCCHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECC
GCGAST
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA