| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126453636
Identifier: 126453636
GI number: 126453636
Start: 3145465
End: 3145842
Strand: Reverse
Name: 126453636
Synonym: BURPS1106A_3231
Alternate gene names: NA
Gene position: 3145842-3145465 (Counterclockwise)
Preceding gene: 126453015
Following gene: 126452300
Centisome position: 78.87
GC content: 69.84
Gene sequence:
>378_bases TTGCTCGAGGCGGCGATCGCGTGCGCGCTGCTCGCGGTTGCGTCGCTCGGTGTGGTGGCGGCGTTGCTCGCGGCGATACG CAGCGAGCGCGACACCGCGGCATGCGAGCCGGCGGTGCTCGTCGCCGATTCGTGGGCGGAGATGGCGCGAGCCGGTGGGC CGTCGGGCGTCGACTGGGACGCGTCGATGTCCGGATTGCGCCACGGCAAGCTCGTCGCGACGAACGCGGGTGCGGATATT TCGAACGTACGGGTCGAATGGGAACGGTCCGCGGGATTGGCTGCAAGCCCTTTGCGTTGCGACGGCGATGCCGCTGCTGC GCGCGATGCCGCCAAGTCGTGCGTGACGCTCGCGTATGCATCGACGCAGCGCCGATGA
Upstream 100 bases:
>100_bases GCCGCTGCCTGCGCATCGCGGCGGGTGGTCGCGTGCGATTCGCCGAGGGCGGTTGCGGAGCGTCGACATGACATGTTGCC GCTCGATGCGTGGGAGCACG
Downstream 100 bases:
>100_bases TGCGCACGACCCGTTGGCGCGCGCATACGCTGGTCGAGGTGATGATCGCGATGGCGCTCGGCTTGCTGATTTTGCTTGCC GCCATGTCGCTCTATCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MLEAAIACALLAVASLGVVAALLAAIRSERDTAACEPAVLVADSWAEMARAGGPSGVDWDASMSGLRHGKLVATNAGADI SNVRVEWERSAGLAASPLRCDGDAAAARDAAKSCVTLAYASTQRR
Sequences:
>Translated_125_residues MLEAAIACALLAVASLGVVAALLAAIRSERDTAACEPAVLVADSWAEMARAGGPSGVDWDASMSGLRHGKLVATNAGADI SNVRVEWERSAGLAASPLRCDGDAAAARDAAKSCVTLAYASTQRR >Mature_125_residues MLEAAIACALLAVASLGVVAALLAAIRSERDTAACEPAVLVADSWAEMARAGGPSGVDWDASMSGLRHGKLVATNAGADI SNVRVEWERSAGLAASPLRCDGDAAAARDAAKSCVTLAYASTQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12683; Mature: 12683
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEAAIACALLAVASLGVVAALLAAIRSERDTAACEPAVLVADSWAEMARAGGPSGVDWD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCC ASMSGLRHGKLVATNAGADISNVRVEWERSAGLAASPLRCDGDAAAARDAAKSCVTLAYA CHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH STQRR HCCCC >Mature Secondary Structure MLEAAIACALLAVASLGVVAALLAAIRSERDTAACEPAVLVADSWAEMARAGGPSGVDWD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCC ASMSGLRHGKLVATNAGADISNVRVEWERSAGLAASPLRCDGDAAAARDAAKSCVTLAYA CHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH STQRR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA