Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126453636

Identifier: 126453636

GI number: 126453636

Start: 3145465

End: 3145842

Strand: Reverse

Name: 126453636

Synonym: BURPS1106A_3231

Alternate gene names: NA

Gene position: 3145842-3145465 (Counterclockwise)

Preceding gene: 126453015

Following gene: 126452300

Centisome position: 78.87

GC content: 69.84

Gene sequence:

>378_bases
TTGCTCGAGGCGGCGATCGCGTGCGCGCTGCTCGCGGTTGCGTCGCTCGGTGTGGTGGCGGCGTTGCTCGCGGCGATACG
CAGCGAGCGCGACACCGCGGCATGCGAGCCGGCGGTGCTCGTCGCCGATTCGTGGGCGGAGATGGCGCGAGCCGGTGGGC
CGTCGGGCGTCGACTGGGACGCGTCGATGTCCGGATTGCGCCACGGCAAGCTCGTCGCGACGAACGCGGGTGCGGATATT
TCGAACGTACGGGTCGAATGGGAACGGTCCGCGGGATTGGCTGCAAGCCCTTTGCGTTGCGACGGCGATGCCGCTGCTGC
GCGCGATGCCGCCAAGTCGTGCGTGACGCTCGCGTATGCATCGACGCAGCGCCGATGA

Upstream 100 bases:

>100_bases
GCCGCTGCCTGCGCATCGCGGCGGGTGGTCGCGTGCGATTCGCCGAGGGCGGTTGCGGAGCGTCGACATGACATGTTGCC
GCTCGATGCGTGGGAGCACG

Downstream 100 bases:

>100_bases
TGCGCACGACCCGTTGGCGCGCGCATACGCTGGTCGAGGTGATGATCGCGATGGCGCTCGGCTTGCTGATTTTGCTTGCC
GCCATGTCGCTCTATCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLEAAIACALLAVASLGVVAALLAAIRSERDTAACEPAVLVADSWAEMARAGGPSGVDWDASMSGLRHGKLVATNAGADI
SNVRVEWERSAGLAASPLRCDGDAAAARDAAKSCVTLAYASTQRR

Sequences:

>Translated_125_residues
MLEAAIACALLAVASLGVVAALLAAIRSERDTAACEPAVLVADSWAEMARAGGPSGVDWDASMSGLRHGKLVATNAGADI
SNVRVEWERSAGLAASPLRCDGDAAAARDAAKSCVTLAYASTQRR
>Mature_125_residues
MLEAAIACALLAVASLGVVAALLAAIRSERDTAACEPAVLVADSWAEMARAGGPSGVDWDASMSGLRHGKLVATNAGADI
SNVRVEWERSAGLAASPLRCDGDAAAARDAAKSCVTLAYASTQRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12683; Mature: 12683

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEAAIACALLAVASLGVVAALLAAIRSERDTAACEPAVLVADSWAEMARAGGPSGVDWD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCC
ASMSGLRHGKLVATNAGADISNVRVEWERSAGLAASPLRCDGDAAAARDAAKSCVTLAYA
CHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
STQRR
HCCCC
>Mature Secondary Structure
MLEAAIACALLAVASLGVVAALLAAIRSERDTAACEPAVLVADSWAEMARAGGPSGVDWD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCC
ASMSGLRHGKLVATNAGADISNVRVEWERSAGLAASPLRCDGDAAAARDAAKSCVTLAYA
CHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
STQRR
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA