| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is recG [H]
Identifier: 126452909
GI number: 126452909
Start: 3277973
End: 3280681
Strand: Reverse
Name: recG [H]
Synonym: BURPS1106A_3359
Alternate gene names: 126452909
Gene position: 3280681-3277973 (Counterclockwise)
Preceding gene: 126452034
Following gene: 126451577
Centisome position: 82.25
GC content: 74.57
Gene sequence:
>2709_bases GTGCCCGTTCGCCGTTCCCTAGCCGATTCCGCCGAAGCCGACGCGATTGCCGATGACGCCGCGTCGGGCGACGAAGCGCG GCGCGGCGCGGCCGGGGCCGCGGGCGGTGTGGATGCCGCGACTCCGGCGGGCGCCGCGCAGGCCGCTCCCCTCGCGGGCG CGGCGGACGCGCTTGCGCCGCGGCGCGCGACGAAGGCGCGGACGAGCCGCGAGGCCGGCGCGCGCGTCGAGCGTGGCGCG CCGCGTGGCCGGGGCGCGACGCAAGCCGCGCCCGCCTCGAGCGCGCACGATCTTCCCGACACGGCCGGCGCACCCGCTGC ACCCGACGTTGATCCGTTCGATGCGGCGCCCGCGTCGCCGCCTCACGCGGCGGCCTGGGCGGAATTCGGCGCCGCGGCCG ACGCCGGCGCGCGATCGGCGCCGCGCGCGACGCCGCGCGGCCGCACCGCCGACGGCCGCGCCGTGCCGGCCGCCGCCCAG GCGGCGCGTGCGCCTCGCGCGCCCCGAGCCGCGCCGCCCGACGCACTACCCGCCGACACGCCGCCCGCCAGCGCGGCGAA GCCCGCCAAACGGGCGGCGAAGGCCGCCTCGAAAACGGTCTCGAAGGCGGCAGCGGACGCAGCCGGCGCCCAGGCGGCAC CGAAGGCCGTGAAAACCGCCGACAAACTCGCGAAGCTCGGCTTGACGCGGGATATCGACCTCGTCCTGCATCTGCCGATG CGCTACGAGGACGAGACGACGCTCACGCCGATGCGCGAACTGTTGCCGGGCGAGACCGCGCAGACGGAAGGCGTCGTGTT CGACAACGAGATCGCGTACCGGCCGCGCCGTCAGTTGCTCGTGAAGCTGCGCGACGACGACGGCGCCGAGCTCGTGCTGC GCTTCCTGAATTTCTACGGCTCGCAGGTCAAGCAGATGGCGGTCGGCCAGCGGCTGCGCGTGCGCGGCGACGTGCGCGGC GGCTTCTTCGGGCTGGAGATCGTGCATCCGACGGTGAAGACCGTCGACGAGGACGCGCCGCTGCCGCAAGCGCTGACGCC CGTCTATCCGAGCACGGCGGGCGTGTCGCAGGCGTATCTGCGCAAGGCGATCGACAATGCGCTCGCGCGCACGCCGCTGC CCGAGCTGCTGCCGCCCGAGATCGCGCGCGCGTATCTGCAGCCGCTCGACGTGCCGCCGCTCGCCGACGCGGTGCGCATG CTCCATCATCCGGGCGTCGGCGCGGACGAGACGGCGCTCATCGACGGCACCCACCCCGCGTGGACGCGCATCAAGTTCGA CGAGCTGCTCGCGCAGCAACTGTCGCTCAAGCGCGCGCACGAGGAGCGTCGCACGCGCGCCGCGCCCGCGATGCCGCGCC GCGCGCGCGACGACGGCGCGGCGCTGTCCGCGCGTCTGCACGCGGCGCTGCCGTTTGCGCTCACGGCCGCGCAGGAGCGC GTCGTCGCGGAGATCGCGCACGACCTCACGCAGCCGCACCCGATGCAGCGCCTGCTGCAGGGCGACGTCGGCAGCGGCAA GACGGTCGTCGCGGCGCTCGCGGCCGCGCAGGCGATCGACGCCGGCTACCAGGCCGCGCTGATGGCGCCCACCGAAATCC TCGCCGAGCAGCACGCGCGCAAGCTGCGCGGCTGGCTCGAGCCGCTCGGCGTGTCGGTCGCGTGGCTCGCCGGCAGCCTG AAGGCGAAGGACAAGCGCGCGGCGCTCGAGGCGGCCGCGCTCGGCACCGCGCAGCTCGTGATCGGCACGCACGCGATGAT TCAGGACACCGTCGAATTCGCGCGGCTCGGGCTCGTGATCGTCGACGAGCAGCACCGCTTCGGCGTCGAGCAGCGGCTCG CGCTGCGGGCGAAGGCGGCGAACGCGGCCGACGGCGCGGCGGGCTTCCAGCCGCACCAGCTGATGATGTCGGCGACGCCG ATCCCGCGCACGCTCGCGATGACGTACTACGCGGATCTCGACGTGTCGACGATCGACGAGCTGCCGCCCGGGCGCACGCC GATCCTCACGCGGCTCGTGTCGGACGCGCGGCGCGACGAGGTGATCGGCCGCGTGCGCGAGGCGGCGCTCGCGGGCCGTC AGGTGTACTGGGTGTGCCCGCTCATCGAGGAAAGCGAGACGCTGCAACTGCAGACGGCTGTCGAGACCTACGAGACGCTC GCCGCCGCGCTGCCCGAGCTGAAGGTGGGGCTCGTGCACGGCCGGCTCGCGCCTGCGGAGAAGGCGGCCGTGATGGACGC GTTCTCGCGCAACGACGTGCAATTGCTCGTCGCGACGACGGTGATCGAAGTCGGCGTCGACGTGCCGAACGCGTCGCTGA TGGTGATCGAGCACGCGGAGCGCTTCGGGCTCGCGCAGCTGCACCAGCTGCGCGGGCGCGTCGGGCGCGGCACGGCCGCG TCGGTGTGCGTGCTGATGTACAGCGGGCCGCTGTCGATCGCGGGCCGCGCGCGGCTGAAGACGATGCGCGAGACGACCGA CGGCTTCGAGATCGCGCGCCGCGATCTGGAGATCCGCGGCCCCGGCGAATTCCTCGGCGCGCGCCAGTCGGGCGCGGCGA TGCTGCGCTTCGCGGACCTGGAAAACGACGGCTGGCTGATCGAGCCGGCGCGCGACGCGGCCGCGCGGCTCATCGCCGCC CATCCGGAGGTCGTCGCGCAGCACCTCGCCCGCTGGCTCGGCGCGCGCGAGCAGTATCTGAAGGCCTGA
Upstream 100 bases:
>100_bases TGAGCCGCTATGATGGCGGGGTTGCGCGGCTTGGCCGGCGTCGCTCGTTGGTGCGACGTGAAAGCCGCTATTGTACTTGC TAGCCTTCTGACCGATGCCC
Downstream 100 bases:
>100_bases GCGCGGAGGCGCGACGGCCGCGCGGGCGGCGTTCCGCGCGCTTCGGACAGGCTTGTTTTCGGCGAAGGTTGGCGAATCGA CCCAAACCAGTGTATAAATT
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 902; Mature: 901
Protein sequence:
>902_residues MPVRRSLADSAEADAIADDAASGDEARRGAAGAAGGVDAATPAGAAQAAPLAGAADALAPRRATKARTSREAGARVERGA PRGRGATQAAPASSAHDLPDTAGAPAAPDVDPFDAAPASPPHAAAWAEFGAAADAGARSAPRATPRGRTADGRAVPAAAQ AARAPRAPRAAPPDALPADTPPASAAKPAKRAAKAASKTVSKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDLVLHLPM RYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDVRG GFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPLADAVRM LHHPGVGADETALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFALTAAQER VVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVAWLAGSL KAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATP IPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAVETYETL AAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAA SVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAAARLIAA HPEVVAQHLARWLGAREQYLKA
Sequences:
>Translated_902_residues MPVRRSLADSAEADAIADDAASGDEARRGAAGAAGGVDAATPAGAAQAAPLAGAADALAPRRATKARTSREAGARVERGA PRGRGATQAAPASSAHDLPDTAGAPAAPDVDPFDAAPASPPHAAAWAEFGAAADAGARSAPRATPRGRTADGRAVPAAAQ AARAPRAPRAAPPDALPADTPPASAAKPAKRAAKAASKTVSKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDLVLHLPM RYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDVRG GFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPLADAVRM LHHPGVGADETALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFALTAAQER VVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVAWLAGSL KAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATP IPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAVETYETL AAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAA SVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAAARLIAA HPEVVAQHLARWLGAREQYLKA >Mature_901_residues PVRRSLADSAEADAIADDAASGDEARRGAAGAAGGVDAATPAGAAQAAPLAGAADALAPRRATKARTSREAGARVERGAP RGRGATQAAPASSAHDLPDTAGAPAAPDVDPFDAAPASPPHAAAWAEFGAAADAGARSAPRATPRGRTADGRAVPAAAQA ARAPRAPRAAPPDALPADTPPASAAKPAKRAAKAASKTVSKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDLVLHLPMR YEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDVRGG FFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPLADAVRML HHPGVGADETALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFALTAAQERV VAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVAWLAGSLK AKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATPI PRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAVETYETLA AALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAAS VCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAAARLIAAH PEVVAQHLARWLGAREQYLKA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=691, Percent_Identity=51.6642547033285, Blast_Score=627, Evalue=1e-180, Organism=Escherichia coli, GI1787357, Length=393, Percent_Identity=38.1679389312977, Blast_Score=232, Evalue=9e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 95244; Mature: 95113
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRRSLADSAEADAIADDAASGDEARRGAAGAAGGVDAATPAGAAQAAPLAGAADALAP CCCHHHHHCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC RRATKARTSREAGARVERGAPRGRGATQAAPASSAHDLPDTAGAPAAPDVDPFDAAPASP HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PHAAAWAEFGAAADAGARSAPRATPRGRTADGRAVPAAAQAARAPRAPRAAPPDALPADT CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC PPASAAKPAKRAAKAASKTVSKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDLVLHLPM CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHCCCCCCEEEEECCC RYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKLRDDDGAELVLRFLNFYG CCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHH SQVKQMAVGQRLRVRGDVRGGFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVSQAYL HHHHHHHHCCHHEEEECCCCCEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH RKAIDNALARTPLPELLPPEIARAYLQPLDVPPLADAVRMLHHPGVGADETALIDGTHPA HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCC WTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFALTAAQER HHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHAR HHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHH KLRGWLEPLGVSVAWLAGSLKAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARLGLVI HHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEE VDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATPIPRTLAMTYYADLDVSTIDE ECCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCHHHEEEEEECCCHHHHHC LPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAVETYETL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEHHHHHHHHHHH AAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVIEHAE HHHCCHHHEEHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCEEEEECHH RFGLAQLHQLRGRVGRGTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRG HHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCC PGEFLGARQSGAAMLRFADLENDGWLIEPARDAAARLIAAHPEVVAQHLARWLGAREQYL CHHHHCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH KA CC >Mature Secondary Structure PVRRSLADSAEADAIADDAASGDEARRGAAGAAGGVDAATPAGAAQAAPLAGAADALAP CCHHHHHCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC RRATKARTSREAGARVERGAPRGRGATQAAPASSAHDLPDTAGAPAAPDVDPFDAAPASP HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PHAAAWAEFGAAADAGARSAPRATPRGRTADGRAVPAAAQAARAPRAPRAAPPDALPADT CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC PPASAAKPAKRAAKAASKTVSKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDLVLHLPM CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHCCCCCCEEEEECCC RYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKLRDDDGAELVLRFLNFYG CCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHH SQVKQMAVGQRLRVRGDVRGGFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVSQAYL HHHHHHHHCCHHEEEECCCCCEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH RKAIDNALARTPLPELLPPEIARAYLQPLDVPPLADAVRMLHHPGVGADETALIDGTHPA HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCC WTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFALTAAQER HHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHAR HHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHH KLRGWLEPLGVSVAWLAGSLKAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARLGLVI HHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEE VDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATPIPRTLAMTYYADLDVSTIDE ECCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCHHHEEEEEECCCHHHHHC LPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAVETYETL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEHHHHHHHHHHH AAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVIEHAE HHHCCHHHEEHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCEEEEECHH RFGLAQLHQLRGRVGRGTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRG HHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCC PGEFLGARQSGAAMLRFADLENDGWLIEPARDAAARLIAAHPEVVAQHLARWLGAREQYL CHHHHCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH KA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]