| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is pssA [H]
Identifier: 126452290
GI number: 126452290
Start: 1257619
End: 1258491
Strand: Direct
Name: pssA [H]
Synonym: BURPS1106A_1285
Alternate gene names: 126452290
Gene position: 1257619-1258491 (Clockwise)
Preceding gene: 126453211
Following gene: 126455016
Centisome position: 31.53
GC content: 69.19
Gene sequence:
>873_bases ATGGCCGCATTCAAACCGCGCCGGCCGCGCAACGGCAATGCTCCGTGGCCGCGCTCGTTTCGTCACAAAAAATCGGTCGC GCAGGACGTCGCGCCCGTCGAGAGCCGGCGCGCCGCGCGCCAGCAGTTCCTGCGGACACGCGGCATCTACCTGCTGCCGA ACGCGTTCACGACGGCCGCGCTCTTCTGCGGCTTTTTCGCCGTCGTGCAGGCGATGAACGTGCGCTTCGAGACCGCCGCG ATCGCGATCTTCGCCGCGATGGTGCTCGACGGGATGGACGGCCGCGTCGCGCGCATGACGCACACGCAGAGCGCGTTCGG CGAGCAGTTCGACAGCCTGTCCGACATGGTGTCGTTCGGCGTCGCGCCCGCGCTCGTGATGTACGAGTGGGTGCTGAAGG ATCTGGGCCGCTGGGGCTGGCTCGCCGCGTTCGTCTACTGCTCGGGCGCCGCGCTGCGGCTCGCGCGCTTCAACACGAAC ATCGGCGTCGTCGACAAGCGCTTCTTCCAGGGGCTGCCGAGCCCGGCCGCCGCGGCGCTGATCGCGGGCTTCGTGTGGCT CGCGACCGACAACCGCGTGCCGATGAAGCTCGGCTGGCTGCCGTGGGTCGCGTTCGTGCTGACGATCTACGCGGGCGTGA CGATGGTGTCGAACGCGCCGTTCTACAGCGGCAAGGCGCTCGACGTGCGGCACCGGGTGCCGTTCGCGGCGATCCTGCTC GTCGTCGTCGCGTTCGTGCTCGTGTCGTCCGATCCACCGCTGATGCTGTTCGGCCTCTTCGTGCTGTACGGGCTGTCCGG CTACGTGTTCTGGGCCTACATGGCGGTGCGCGGCCGCGCGAATCCGGCGCGCTCGTCGCAGCGCGAGCACTGA
Upstream 100 bases:
>100_bases AAGGGCAGCCGAGCACGCGTGTCGATCGGCGAGAAGGTGTCTGCATCGTCGACGATCCTCGCCGAGCTGCCCGAACAACC GTAATCGGGAAGGCGTATCG
Downstream 100 bases:
>100_bases CCGGCGCGCCCCGGCCGGCCCGGCGCCGGGAACCGCGCACGCATCCGGCCGATCGCGCCATGGACGGCGGCCCCAAGGCC GCCGTTTTTCTTGCCCGCGC
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MAAFKPRRPRNGNAPWPRSFRHKKSVAQDVAPVESRRAARQQFLRTRGIYLLPNAFTTAALFCGFFAVVQAMNVRFETAA IAIFAAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTN IGVVDKRFFQGLPSPAAAALIAGFVWLATDNRVPMKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL VVVAFVLVSSDPPLMLFGLFVLYGLSGYVFWAYMAVRGRANPARSSQREH
Sequences:
>Translated_290_residues MAAFKPRRPRNGNAPWPRSFRHKKSVAQDVAPVESRRAARQQFLRTRGIYLLPNAFTTAALFCGFFAVVQAMNVRFETAA IAIFAAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTN IGVVDKRFFQGLPSPAAAALIAGFVWLATDNRVPMKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL VVVAFVLVSSDPPLMLFGLFVLYGLSGYVFWAYMAVRGRANPARSSQREH >Mature_289_residues AAFKPRRPRNGNAPWPRSFRHKKSVAQDVAPVESRRAARQQFLRTRGIYLLPNAFTTAALFCGFFAVVQAMNVRFETAAI AIFAAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTNI GVVDKRFFQGLPSPAAAALIAGFVWLATDNRVPMKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILLV VVAFVLVSSDPPLMLFGLFVLYGLSGYVFWAYMAVRGRANPARSSQREH
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=168, Percent_Identity=30.3571428571429, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 32114; Mature: 31983
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAFKPRRPRNGNAPWPRSFRHKKSVAQDVAPVESRRAARQQFLRTRGIYLLPNAFTTAA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHH LFCGFFAVVQAMNVRFETAAIAIFAAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTNIGVVDKRFFQGLPSPAAAAL HHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHH IAGFVWLATDNRVPMKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL HHHHHHEECCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHH VVVAFVLVSSDPPLMLFGLFVLYGLSGYVFWAYMAVRGRANPARSSQREH HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AAFKPRRPRNGNAPWPRSFRHKKSVAQDVAPVESRRAARQQFLRTRGIYLLPNAFTTAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHH LFCGFFAVVQAMNVRFETAAIAIFAAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTNIGVVDKRFFQGLPSPAAAAL HHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHH IAGFVWLATDNRVPMKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL HHHHHHEECCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHH VVVAFVLVSSDPPLMLFGLFVLYGLSGYVFWAYMAVRGRANPARSSQREH HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]