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The map label for this gene is psd [H]

Identifier: 126453211

GI number: 126453211

Start: 1256952

End: 1257602

Strand: Direct

Name: psd [H]

Synonym: BURPS1106A_1284

Alternate gene names: 126453211

Gene position: 1256952-1257602 (Clockwise)

Preceding gene: 126453783

Following gene: 126452290

Centisome position: 31.51

GC content: 66.36

Gene sequence:

>651_bases
ATGAACTATCCTCATCCGATCATCGCGCGCGAAGGCTGGCCGTTCATCGCAATCGCGGCCGTCGTCGCGCTGTTGATCCA
CGCCGTCGGCGGGTTCGGCCTCGCATGGCCGTTCTGGCTGCTGCTCGTCTTCGTGGTCCAGTTCTTCCGCGATCCGCCGC
GCGCCATTCCGACGCAGGCGAACGCGGTGCTGTGTCCGGCCGACGGCCGTATCGTCGCCGTCGAGACGGCGCACGATCCG
TACGCGGATCGCGAAGCGCTGAAGATCAGCGTGTTCATGAACGTGTTCAATGTGCACTCGCAGCGCTCGCCCGTCGACGG
CGCGGTGCAGAAGGTCGAGTATTTTCCGGGCGCGTTCCTGAATGCCGCGCTCGACAAGGCGTCGGCCGAGAACGAGCGCA
ACGCGGTCGTGATCCAGACGGGCGCGGGGCATACCGTGACGGCCGTGCAGATCGCGGGCCTCGTCGCGCGCCGGATTCTC
TGTTACGTGCGCGCGGGCGAGCCGCTGTCGCGCGGGCAGCGCTACGGTTTCATCCGCTTCGGCTCGCGCGTCGACGTTTA
TTTGCCGAAGGGCAGCCGAGCACGCGTGTCGATCGGCGAGAAGGTGTCTGCATCGTCGACGATCCTCGCCGAGCTGCCCG
AACAACCGTAA

Upstream 100 bases:

>100_bases
CTCGAATCGAGGGTCGGCATCAAAAAGCCGCCCGAAGGCACCGGAGCCCAGGGCGGCTTTTGCTATCCTACGGGCTTTGC
AATTCATCGAAGAACGAACC

Downstream 100 bases:

>100_bases
TCGGGAAGGCGTATCGATGGCCGCATTCAAACCGCGCCGGCCGCGCAACGGCAATGCTCCGTGGCCGCGCTCGTTTCGTC
ACAAAAAATCGGTCGCGCAG

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MNYPHPIIAREGWPFIAIAAVVALLIHAVGGFGLAWPFWLLLVFVVQFFRDPPRAIPTQANAVLCPADGRIVAVETAHDP
YADREALKISVFMNVFNVHSQRSPVDGAVQKVEYFPGAFLNAALDKASAENERNAVVIQTGAGHTVTAVQIAGLVARRIL
CYVRAGEPLSRGQRYGFIRFGSRVDVYLPKGSRARVSIGEKVSASSTILAELPEQP

Sequences:

>Translated_216_residues
MNYPHPIIAREGWPFIAIAAVVALLIHAVGGFGLAWPFWLLLVFVVQFFRDPPRAIPTQANAVLCPADGRIVAVETAHDP
YADREALKISVFMNVFNVHSQRSPVDGAVQKVEYFPGAFLNAALDKASAENERNAVVIQTGAGHTVTAVQIAGLVARRIL
CYVRAGEPLSRGQRYGFIRFGSRVDVYLPKGSRARVSIGEKVSASSTILAELPEQP
>Mature_216_residues
MNYPHPIIAREGWPFIAIAAVVALLIHAVGGFGLAWPFWLLLVFVVQFFRDPPRAIPTQANAVLCPADGRIVAVETAHDP
YADREALKISVFMNVFNVHSQRSPVDGAVQKVEYFPGAFLNAALDKASAENERNAVVIQTGAGHTVTAVQIAGLVARRIL
CYVRAGEPLSRGQRYGFIRFGSRVDVYLPKGSRARVSIGEKVSASSTILAELPEQP

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 23476; Mature: 23476

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYPHPIIAREGWPFIAIAAVVALLIHAVGGFGLAWPFWLLLVFVVQFFRDPPRAIPTQA
CCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
NAVLCPADGRIVAVETAHDPYADREALKISVFMNVFNVHSQRSPVDGAVQKVEYFPGAFL
CEEEECCCCEEEEEEECCCCCCCHHHEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHH
NAALDKASAENERNAVVIQTGAGHTVTAVQIAGLVARRILCYVRAGEPLSRGQRYGFIRF
HHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEE
GSRVDVYLPKGSRARVSIGEKVSASSTILAELPEQP
CCEEEEEECCCCCEEEECCCCCCCCCHHEECCCCCC
>Mature Secondary Structure
MNYPHPIIAREGWPFIAIAAVVALLIHAVGGFGLAWPFWLLLVFVVQFFRDPPRAIPTQA
CCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
NAVLCPADGRIVAVETAHDPYADREALKISVFMNVFNVHSQRSPVDGAVQKVEYFPGAFL
CEEEECCCCEEEEEEECCCCCCCHHHEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHH
NAALDKASAENERNAVVIQTGAGHTVTAVQIAGLVARRILCYVRAGEPLSRGQRYGFIRF
HHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEE
GSRVDVYLPKGSRARVSIGEKVSASSTILAELPEQP
CCEEEEEECCCCCEEEECCCCCCCCCHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA