| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451733
Identifier: 126451733
GI number: 126451733
Start: 3378054
End: 3378470
Strand: Direct
Name: 126451733
Synonym: BURPS1106A_3471
Alternate gene names: NA
Gene position: 3378054-3378470 (Clockwise)
Preceding gene: 126454202
Following gene: 126452434
Centisome position: 84.7
GC content: 66.91
Gene sequence:
>417_bases ATGACCGACCCACGGCCGGCCGACGTGCCCTGGTTGACCCCTTATCTGACGGTGCGCAGCGCGCAGGCGTCGATTCAGTT CTTTAGCGACGCGTTCGGCTTCGAGAAGCGCGATTTGATCGACGAAGACGGCGCGATCATGCACGTCGAGATGTCGTACC GCGGCCAGTTGATCGTGATGTTCGCGCCCGAGGGCGCGTTCGGCTCGACGGCGCGCACGCCGAGAAGCGCCGACGCGATC GCGCCGCAGTCGTTCTATCTGTACGTCGACGACGTCGATGCGACCTACCGCCGCGCGCTCGACGCGGGCGCGAAATCGCT GAGCGCGCCGCAGGATCAGTTCTGGGGCGATCGCTTCGCGCAGATCGAGGATCTCGACGGCTACCGGTGGGCGCTCGCGC GGCGCATCGGCGCATGA
Upstream 100 bases:
>100_bases GCATTCCGCACTCTTCACGCTGCCGCACGCGCTGCGCGATACTCTCGGCATGCATCGCTAAGTTCGGCGAAGCATCCGCC TTTCCCGCAGGAGAACCCGC
Downstream 100 bases:
>100_bases GCGGCGCCGCCACGACCGCGGCGGTGCCGCGCTTCTTCGTCGACGCGGCGTTGCGCGCCGACGCCACGCTGGCGCTGCCG GCCGACGTCGCGCGTCACGC
Product: glyoxalase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTDPRPADVPWLTPYLTVRSAQASIQFFSDAFGFEKRDLIDEDGAIMHVEMSYRGQLIVMFAPEGAFGSTARTPRSADAI APQSFYLYVDDVDATYRRALDAGAKSLSAPQDQFWGDRFAQIEDLDGYRWALARRIGA
Sequences:
>Translated_138_residues MTDPRPADVPWLTPYLTVRSAQASIQFFSDAFGFEKRDLIDEDGAIMHVEMSYRGQLIVMFAPEGAFGSTARTPRSADAI APQSFYLYVDDVDATYRRALDAGAKSLSAPQDQFWGDRFAQIEDLDGYRWALARRIGA >Mature_137_residues TDPRPADVPWLTPYLTVRSAQASIQFFSDAFGFEKRDLIDEDGAIMHVEMSYRGQLIVMFAPEGAFGSTARTPRSADAIA PQSFYLYVDDVDATYRRALDAGAKSLSAPQDQFWGDRFAQIEDLDGYRWALARRIGA
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 15449; Mature: 15318
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPRPADVPWLTPYLTVRSAQASIQFFSDAFGFEKRDLIDEDGAIMHVEMSYRGQLIVM CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEE FAPEGAFGSTARTPRSADAIAPQSFYLYVDDVDATYRRALDAGAKSLSAPQDQFWGDRFA ECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCHHHCCCCCHHHCCCCCC QIEDLDGYRWALARRIGA EEECCCCHHHHHHHHHCC >Mature Secondary Structure TDPRPADVPWLTPYLTVRSAQASIQFFSDAFGFEKRDLIDEDGAIMHVEMSYRGQLIVM CCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEE FAPEGAFGSTARTPRSADAIAPQSFYLYVDDVDATYRRALDAGAKSLSAPQDQFWGDRFA ECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCHHHCCCCCHHHCCCCCC QIEDLDGYRWALARRIGA EEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]