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The map label for this gene is 126443282

Identifier: 126443282

GI number: 126443282

Start: 1928686

End: 1929519

Strand: Reverse

Name: 126443282

Synonym: BURPS668_A1991

Alternate gene names: NA

Gene position: 1929519-1928686 (Counterclockwise)

Preceding gene: 126444946

Following gene: 126442369

Centisome position: 61.7

GC content: 66.43

Gene sequence:

>834_bases
ATGGGGCCGATCACGCCGAACAGCTGCGCTCGACTCGGCTTTTCCGGCGATGTTGTGCCGCGCGAATGCTTTGGTGAACT
GATGACGATCGAGTCCGCCTATGCGGCGCTCGACGCGGACCGCGACGCCGTGCTCGCTGCCGCCCGTCAGGAAGCCGACA
GAGTGATGGCGGAGGCAGTGGCGAGAACGGAAGAGATGATCGCCGCCGCACAGAGCGAATACGATGCGGCTGCCGAGCGC
GGCTATCGAGACGGCTACGACCAAGCGTTCGGCAAGTGGATGGATCGCCTGGCCGATGTCGCGGACGCGCAGAACCGACT
GCAACTGCGAATGCGCGAGCGGCTGGCCGACATCGTCGCATCGGCGGTCGAGCAAATCGTGCGCGCCGAAAGCCGCGAGA
CGCTATTCAAGCGCGCGTTGGCATCGGTCGAGCGAATCGTGGACGGCGCGACATATTTGCGTGTCGTCGTGCACGAGAAC
GATCTGGATCAGGCGAGAGCGATCTTCGGCACGCTCGAAGCGCGCTGGCGCGAGTTCGGCCGCCCGATCGCGATGTCGGT
GGTGGCGGACAAGCGGCTTGCTCCAGGCAGTTGCGTATGCGAGTCCGATTTCGGCGCAATCGATGCGAGCCTGGATACGC
AGCTGCGCGCGATGCGCGGCGCCGTCGCGCGTGCGCTCAAGCGTTCGATTGAAGAAGCCGGCGCGAACGAGTGCGATGCG
ACACGCCGTGACGAATCGATCGGCATCGAGACGGATCGGGACGGCGAGCGTGACGCACGGAACGCCGAGCAGGATGCGGG
GGACGCGGGCGCGAGCGCGGGGGGGCGGGCATGA

Upstream 100 bases:

>100_bases
GGCTCGACGCGTTCGGCGGCGAGCATCTCTTCGCTCGACTGCCTCGATTATTGCCGGAGTACGCATGGCTATTTGGTTGA
GACGTCCCCGGATCGCTGAA

Downstream 100 bases:

>100_bases
GCGCGGACGAGCCCTTGCGCACGGCCGAATTCAGCCACCTGGCGGATGCGATCGAGCGGGAAATTCTTGCGGTGTCGGGT
GTCGTGCGCACGGGCCGGGT

Product: type III secretion system protein HrpB

Products: NA

Alternate protein names: Type III Secretion System Protein HrpB; Type III Secretion Apparatus Protein HrpE/YscL Family; TypeIII Secretion Cytoplasmic Protein SctL; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MGPITPNSCARLGFSGDVVPRECFGELMTIESAYAALDADRDAVLAAARQEADRVMAEAVARTEEMIAAAQSEYDAAAER
GYRDGYDQAFGKWMDRLADVADAQNRLQLRMRERLADIVASAVEQIVRAESRETLFKRALASVERIVDGATYLRVVVHEN
DLDQARAIFGTLEARWREFGRPIAMSVVADKRLAPGSCVCESDFGAIDASLDTQLRAMRGAVARALKRSIEEAGANECDA
TRRDESIGIETDRDGERDARNAEQDAGDAGASAGGRA

Sequences:

>Translated_277_residues
MGPITPNSCARLGFSGDVVPRECFGELMTIESAYAALDADRDAVLAAARQEADRVMAEAVARTEEMIAAAQSEYDAAAER
GYRDGYDQAFGKWMDRLADVADAQNRLQLRMRERLADIVASAVEQIVRAESRETLFKRALASVERIVDGATYLRVVVHEN
DLDQARAIFGTLEARWREFGRPIAMSVVADKRLAPGSCVCESDFGAIDASLDTQLRAMRGAVARALKRSIEEAGANECDA
TRRDESIGIETDRDGERDARNAEQDAGDAGASAGGRA
>Mature_276_residues
GPITPNSCARLGFSGDVVPRECFGELMTIESAYAALDADRDAVLAAARQEADRVMAEAVARTEEMIAAAQSEYDAAAERG
YRDGYDQAFGKWMDRLADVADAQNRLQLRMRERLADIVASAVEQIVRAESRETLFKRALASVERIVDGATYLRVVVHEND
LDQARAIFGTLEARWREFGRPIAMSVVADKRLAPGSCVCESDFGAIDASLDTQLRAMRGAVARALKRSIEEAGANECDAT
RRDESIGIETDRDGERDARNAEQDAGDAGASAGGRA

Specific function: Unknown

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30068; Mature: 29937

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPITPNSCARLGFSGDVVPRECFGELMTIESAYAALDADRDAVLAAARQEADRVMAEAV
CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ARTEEMIAAAQSEYDAAAERGYRDGYDQAFGKWMDRLADVADAQNRLQLRMRERLADIVA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVEQIVRAESRETLFKRALASVERIVDGATYLRVVVHENDLDQARAIFGTLEARWREFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHC
RPIAMSVVADKRLAPGSCVCESDFGAIDASLDTQLRAMRGAVARALKRSIEEAGANECDA
CCHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TRRDESIGIETDRDGERDARNAEQDAGDAGASAGGRA
CCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GPITPNSCARLGFSGDVVPRECFGELMTIESAYAALDADRDAVLAAARQEADRVMAEAV
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ARTEEMIAAAQSEYDAAAERGYRDGYDQAFGKWMDRLADVADAQNRLQLRMRERLADIVA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVEQIVRAESRETLFKRALASVERIVDGATYLRVVVHENDLDQARAIFGTLEARWREFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHC
RPIAMSVVADKRLAPGSCVCESDFGAIDASLDTQLRAMRGAVARALKRSIEEAGANECDA
CCHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TRRDESIGIETDRDGERDARNAEQDAGDAGASAGGRA
CCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA