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The map label for this gene is hrpB6 [H]

Identifier: 126442369

GI number: 126442369

Start: 1927340

End: 1928671

Strand: Reverse

Name: hrpB6 [H]

Synonym: BURPS668_A1990

Alternate gene names: 126442369

Gene position: 1928671-1927340 (Counterclockwise)

Preceding gene: 126443282

Following gene: 126445019

Centisome position: 61.67

GC content: 66.37

Gene sequence:

>1332_bases
TTGCGCACGGCCGAATTCAGCCACCTGGCGGATGCGATCGAGCGGGAAATTCTTGCGGTGTCGGGTGTCGTGCGCACGGG
CCGGGTCCTCGAAGTGATCGGCACGCTGATCAAGGTGTCCGGGCTCGACGTCGCGCTGGGGGAATTGTGCGAGCTTCGAA
CGCGCGAAGGCAGGCTGTTGCAACGGGCGGAAGTCGTCGGTTTCACGCGTGATGTGGCGCTGCTGTCGCCGTTCTCGCAA
CTCGAGCAGATCTCGCGGACCACCCAGGTGATCGGGCTCGGCCGTCCGTTGTCGATCCCGGTCGGCGACGCACTGCTCGG
CCGCGTGATCGACGGCCTCGGAGAGCCGCTCGACGGCGGTCCGCCGCTTGCGTCGGAAACGCTGCAGCCGCTGATCGCGG
CACCTCCCGAGCCGATGAGCCGTCGGATGATCGATGCGGCGATGCCGACGGGCGTGCGAGTCGTCGACGCGATGATGGCG
CTCGGGGAGGGCCAGCGCATGGGTATCTTCGCGCCGGCGGGGGTCGGCAAGAGCACGCTGCTGGGCATGTTCGCGCGCGG
CGCCGCGTGCGATGTCAACGTTATCGCGCTGATCGGCGAGCGGGGGCGCGAGGTGCGGGAATTCATCGAACTGATTCTCG
GGCAGGCGGGCATGGCGCGTTCCGTCGTCGTCTGCGCGACGTCGGATCGTTCGTCAATGGAGCGGGCGAAGGCGGCCTAT
GCGGCGACGGCGATCGCCGAATACTTTCGGGACCGCGGCCGACGCGTGCTGTTGATGATGGACTCGTTGACGCGCTTCGC
GCGAGCGGGGCGCGAAATCGGCCTCGCGGCCGGCGAGCCGCCTGCCCGGCGAGGCTTTCCTCCGTCGGTCTTCGCCGAAT
TGCCGCGCTTGCTCGAACGCGCCGGAATGGGGAGGACCGGATCGATCACCGCGCTCTATACGGTACTCGCGGAAGACGAG
AGCGGCAGTGATCCTGTTGCGGAAGAAGTACGCGGCATTCTCGACGGGCACATGATCCTGTCGCGGGAAGTCGCGGCGAA
AAATCAGTATCCGGCGATCGACGTATTGGGGAGCCTGTCCCGCGTGATGCCGCTCGTTGTCGACGATGGGCATATGCGAG
CGGCGGCGCGGGTTCGGGAATTGTTGGCCAAACATCGGGAGGTGGAGGTCTTGCTGCAGATCGGGGAGTACAAGGCGGGG
GCGAATCCGCTTGCGGACGAGGCGATCGCGAAGGCCGACGCGATTCGATCTTTTTTTTCGCAACGAACGGACGATTACGC
GGCCGCCGAGGACACCATCGCCAGGCTGTATGCGTTGAGCGGGGCGAACTGA

Upstream 100 bases:

>100_bases
AGACGGATCGGGACGGCGAGCGTGACGCACGGAACGCCGAGCAGGATGCGGGGGACGCGGGCGCGAGCGCGGGGGGGCGG
GCATGAGCGCGGACGAGCCC

Downstream 100 bases:

>100_bases
TGGCGGGGCTGAGCAAATCAATGATGCGTGAGCGCCGCGCAATGGCGTTTGCGCGAGCGCTCGAGCGGCGCCGCAGGCTG
GATGCGGTATTGCGTGAAGA

Product: type III secretion system ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MRTAEFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLDVALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ
LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMA
LGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAY
AATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMGRTGSITALYTVLAEDE
SGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAG
ANPLADEAIAKADAIRSFFSQRTDDYAAAEDTIARLYALSGAN

Sequences:

>Translated_443_residues
MRTAEFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLDVALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ
LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMA
LGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAY
AATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMGRTGSITALYTVLAEDE
SGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAG
ANPLADEAIAKADAIRSFFSQRTDDYAAAEDTIARLYALSGAN
>Mature_443_residues
MRTAEFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLDVALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ
LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMA
LGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAY
AATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMGRTGSITALYTVLAEDE
SGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAG
ANPLADEAIAKADAIRSFFSQRTDDYAAAEDTIARLYALSGAN

Specific function: Necessary for both basic pathogenicity and the induction of the hypersensitive response in resistant plants. May function as an ATPase that is related to a transport apparatus rather than as part of a proton pump [H]

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=416, Percent_Identity=31.4903846153846, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI50345984, Length=411, Percent_Identity=29.1970802919708, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4757810, Length=411, Percent_Identity=29.1970802919708, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI19913426, Length=306, Percent_Identity=28.4313725490196, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI19913428, Length=306, Percent_Identity=27.7777777777778, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI19913424, Length=255, Percent_Identity=30.9803921568627, Blast_Score=105, Evalue=9e-23,
Organism=Escherichia coli, GI1788251, Length=441, Percent_Identity=43.3106575963719, Blast_Score=327, Evalue=7e-91,
Organism=Escherichia coli, GI1790170, Length=409, Percent_Identity=30.3178484107579, Blast_Score=166, Evalue=4e-42,
Organism=Escherichia coli, GI1790172, Length=418, Percent_Identity=29.4258373205742, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI1790217, Length=249, Percent_Identity=28.9156626506024, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25144756, Length=414, Percent_Identity=29.951690821256, Blast_Score=159, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI71988063, Length=316, Percent_Identity=31.6455696202532, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI71988080, Length=413, Percent_Identity=29.0556900726392, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17510931, Length=289, Percent_Identity=29.4117647058824, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17570191, Length=326, Percent_Identity=26.3803680981595, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71988074, Length=297, Percent_Identity=29.96632996633, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17565854, Length=253, Percent_Identity=31.6205533596838, Blast_Score=106, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6322581, Length=425, Percent_Identity=31.0588235294118, Blast_Score=167, Evalue=4e-42,
Organism=Saccharomyces cerevisiae, GI6319370, Length=458, Percent_Identity=27.9475982532751, Blast_Score=145, Evalue=9e-36,
Organism=Saccharomyces cerevisiae, GI6319603, Length=345, Percent_Identity=28.4057971014493, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6320016, Length=235, Percent_Identity=31.9148936170213, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24638766, Length=415, Percent_Identity=29.6385542168675, Blast_Score=161, Evalue=8e-40,
Organism=Drosophila melanogaster, GI24658560, Length=418, Percent_Identity=30.3827751196172, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI28574560, Length=354, Percent_Identity=29.9435028248588, Blast_Score=140, Evalue=3e-33,
Organism=Drosophila melanogaster, GI281361666, Length=393, Percent_Identity=26.7175572519084, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24646341, Length=393, Percent_Identity=26.7175572519084, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI17136796, Length=393, Percent_Identity=26.7175572519084, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24583988, Length=291, Percent_Identity=29.2096219931272, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24583986, Length=291, Percent_Identity=29.2096219931272, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24583984, Length=291, Percent_Identity=29.2096219931272, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24583992, Length=291, Percent_Identity=28.5223367697594, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI20129479, Length=255, Percent_Identity=30.1960784313725, Blast_Score=103, Evalue=3e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR004100
- InterPro:   IPR005714
- InterPro:   IPR013380 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 47352; Mature: 47352

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTAEFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLDVALGELCELRTREGRLL
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH
QRAEVVGFTRDVALLSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PPLASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTL
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHH
LGMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAY
HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHH
AATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLER
HHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AGMGRTGSITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLS
HCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFS
HHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QRTDDYAAAEDTIARLYALSGAN
HCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTAEFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLDVALGELCELRTREGRLL
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH
QRAEVVGFTRDVALLSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PPLASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTL
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHH
LGMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAY
HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHH
AATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLER
HHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AGMGRTGSITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLS
HCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFS
HHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QRTDDYAAAEDTIARLYALSGAN
HCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]