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The map label for this gene is 126444946

Identifier: 126444946

GI number: 126444946

Start: 1929540

End: 1930307

Strand: Reverse

Name: 126444946

Synonym: BURPS668_A1992

Alternate gene names: NA

Gene position: 1930307-1929540 (Counterclockwise)

Preceding gene: 126442940

Following gene: 126443282

Centisome position: 61.72

GC content: 66.8

Gene sequence:

>768_bases
ATGATCGCCGCATCGAGCCCGTCGCCGCATCAGCGCGCGGCTGCGCTGCTGGAGCGCTACCGACGCAATTTCGCGAACGC
CGTATGTTGGGTTCATCCGTCGTGGACCTGCGCGCTGCTCGGCATCGACGACTCGCGCTGTGCCGTCTGGCGGGCCGCGC
TCGAGCGAGCGGGCGAAGCCACGCGCATCCCGTGCTCGCAAGCGATCGCATGCGCCGCGGGCGTGGCGCGGCCTTCGCTC
GACATGCTGCTCGAACCGGCCCTGCGGAGGCCGGCGTGTGGTTCGACCGTCGCCGCGCGAATACCGAATCTGGCGCTGCT
GGACGTGCTGCCGCACGAGCTTGGGCTCGCCGTGCTCAGGATGCGTGCGCTGTGTCTCCGGAGTGCGGAAGTGCGGGTCG
TGATCGATAAGCGGACGCGCTCGCGAATCCTGGCATGGACAGGAATTCATCCGGACCACTTCATGCAGGATCCTCGTTCG
ATCGGCGGGGTGGACGCTGCGTGGCTGAAGGCGGCTGTCGGGATGCCGCCGCTGGCGTCCCATGATGCACTGACGCTGTC
GATCGAGGGCTGGATGCTATTGCAGTGCGATACGGGCGCGCCTCCGTCCTCGGACACGATCACGTTGATGCGGCTCGCCT
TGCCGCGTAGTCTGGCCACGCCTCATTGGCTGGCCGAATTGGCCCCACGGCTCGACGCGTTCGGCGGCGAGCATCTCTTC
GCTCGACTGCCTCGATTATTGCCGGAGTACGCATGGCTATTTGGTTGA

Upstream 100 bases:

>100_bases
CACATGAAGCCGGCAGCGCAGCGCCATGGCGCAAGCGCGTCGCCGAACTCGCCGCGCACTTGCGCCGCCGTCAGCGGGCG
AACTGAGAAGGGCGCAGTGC

Downstream 100 bases:

>100_bases
GACGTCCCCGGATCGCTGAAATGGGGCCGATCACGCCGAACAGCTGCGCTCGACTCGGCTTTTCCGGCGATGTTGTGCCG
CGCGAATGCTTTGGTGAACT

Product: type III secretion protein HrpB4

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIAASSPSPHQRAAALLERYRRNFANAVCWVHPSWTCALLGIDDSRCAVWRAALERAGEATRIPCSQAIACAAGVARPSL
DMLLEPALRRPACGSTVAARIPNLALLDVLPHELGLAVLRMRALCLRSAEVRVVIDKRTRSRILAWTGIHPDHFMQDPRS
IGGVDAAWLKAAVGMPPLASHDALTLSIEGWMLLQCDTGAPPSSDTITLMRLALPRSLATPHWLAELAPRLDAFGGEHLF
ARLPRLLPEYAWLFG

Sequences:

>Translated_255_residues
MIAASSPSPHQRAAALLERYRRNFANAVCWVHPSWTCALLGIDDSRCAVWRAALERAGEATRIPCSQAIACAAGVARPSL
DMLLEPALRRPACGSTVAARIPNLALLDVLPHELGLAVLRMRALCLRSAEVRVVIDKRTRSRILAWTGIHPDHFMQDPRS
IGGVDAAWLKAAVGMPPLASHDALTLSIEGWMLLQCDTGAPPSSDTITLMRLALPRSLATPHWLAELAPRLDAFGGEHLF
ARLPRLLPEYAWLFG
>Mature_255_residues
MIAASSPSPHQRAAALLERYRRNFANAVCWVHPSWTCALLGIDDSRCAVWRAALERAGEATRIPCSQAIACAAGVARPSL
DMLLEPALRRPACGSTVAARIPNLALLDVLPHELGLAVLRMRALCLRSAEVRVVIDKRTRSRILAWTGIHPDHFMQDPRS
IGGVDAAWLKAAVGMPPLASHDALTLSIEGWMLLQCDTGAPPSSDTITLMRLALPRSLATPHWLAELAPRLDAFGGEHLF
ARLPRLLPEYAWLFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27780; Mature: 27780

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAASSPSPHQRAAALLERYRRNFANAVCWVHPSWTCALLGIDDSRCAVWRAALERAGEA
CCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCC
TRIPCSQAIACAAGVARPSLDMLLEPALRRPACGSTVAARIPNLALLDVLPHELGLAVLR
CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
MRALCLRSAEVRVVIDKRTRSRILAWTGIHPDHFMQDPRSIGGVDAAWLKAAVGMPPLAS
HHHHHHCCCCEEEEEECCCCCEEEEEECCCCHHHHCCHHHCCCCHHHHHHHHHCCCCCCC
HDALTLSIEGWMLLQCDTGAPPSSDTITLMRLALPRSLATPHWLAELAPRLDAFGGEHLF
CCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCHHHH
ARLPRLLPEYAWLFG
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MIAASSPSPHQRAAALLERYRRNFANAVCWVHPSWTCALLGIDDSRCAVWRAALERAGEA
CCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCC
TRIPCSQAIACAAGVARPSLDMLLEPALRRPACGSTVAARIPNLALLDVLPHELGLAVLR
CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
MRALCLRSAEVRVVIDKRTRSRILAWTGIHPDHFMQDPRSIGGVDAAWLKAAVGMPPLAS
HHHHHHCCCCEEEEEECCCCCEEEEEECCCCHHHHCCHHHCCCCHHHHHHHHHCCCCCCC
HDALTLSIEGWMLLQCDTGAPPSSDTITLMRLALPRSLATPHWLAELAPRLDAFGGEHLF
CCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCHHHH
ARLPRLLPEYAWLFG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA