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The map label for this gene is yqjI [H]

Identifier: 126443255

GI number: 126443255

Start: 20771

End: 21475

Strand: Reverse

Name: yqjI [H]

Synonym: BURPS668_A0030

Alternate gene names: 126443255

Gene position: 21475-20771 (Counterclockwise)

Preceding gene: 126443770

Following gene: 126444748

Centisome position: 0.69

GC content: 68.51

Gene sequence:

>705_bases
ATGCGCCACGCTCACCGTTTTTCGCGCCGCGAATGCGGCATGTCCGATTCGTTCGGACACAGCCCGTTCGAGATGTTTCG
TCAGATGTTCGGCGGCCATCGCCGCGGCGGCGGCCGGCATGGCTTCGGTCCATTCGGCGGCTTCGGCGGCGGCCCCGGTG
GGTTCGGCGGCTTCGGAGACGACGCGATGCCGCGCGGCCGTCAATTCAGCGCCGACGATCTGCAGTTGCTGCTGCTCGCG
CTGCTCGCCGAGCAGCCGAGCCACGGCTACGAGCTGATCAAGGCGCTCGACACGCGCTCGAGCGGCTTCTACGCGCCGAG
CCCCGGCATGGTGTATCCGGCGCTCACGTATCTGGAAGAACTCGGCTACGTGACGGTGCAGGCCGAAGGCAACCGCAAGC
GTTACGCGCTCGCCGACGCGGGCCGCGCGCATCTCGACGCGCAGCGTGAACGCGTCGAGATGCTGTTCGCGAAGCTCGCG
CATCTCGGCCGCAAGATGGAATTCATGCGTCGCGCGTTCGCCGGCGAAGCGCCCGCCGCGCCCGAGGACGACACGCGCGG
CTGGCTGCCGGAATTCGTCGAAGCACGGATGGCGCTCAAGCAAGCGCTCTTTCGCAGAAGCGGCGCAAACGCCGACGAGC
AACGCCGCATCGCGGCCATTTTGCGGCGCGCCGTCGCCGACATCGAAGGCCGCGCGCAAGGCTGA

Upstream 100 bases:

>100_bases
GGCCATCGCACTCCGCCCCATCGTTCCCCGTTTAAATTCCGTTGACTTTATATCTTTCGATATATATCTTTAGATACATC
TAAAGACACAGGAGGCGGAC

Downstream 100 bases:

>100_bases
ATCGCGCCGTTTCCGGCTCATCAAGGAGAACCGATCGACATGACCCAACCGACTACCGAGCGCGCGGTCGTACGCGTGCG
TCATACGCTGAAATTCCGCC

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRHAHRFSRRECGMSDSFGHSPFEMFRQMFGGHRRGGGRHGFGPFGGFGGGPGGFGGFGDDAMPRGRQFSADDLQLLLLA
LLAEQPSHGYELIKALDTRSSGFYAPSPGMVYPALTYLEELGYVTVQAEGNRKRYALADAGRAHLDAQRERVEMLFAKLA
HLGRKMEFMRRAFAGEAPAAPEDDTRGWLPEFVEARMALKQALFRRSGANADEQRRIAAILRRAVADIEGRAQG

Sequences:

>Translated_234_residues
MRHAHRFSRRECGMSDSFGHSPFEMFRQMFGGHRRGGGRHGFGPFGGFGGGPGGFGGFGDDAMPRGRQFSADDLQLLLLA
LLAEQPSHGYELIKALDTRSSGFYAPSPGMVYPALTYLEELGYVTVQAEGNRKRYALADAGRAHLDAQRERVEMLFAKLA
HLGRKMEFMRRAFAGEAPAAPEDDTRGWLPEFVEARMALKQALFRRSGANADEQRRIAAILRRAVADIEGRAQG
>Mature_234_residues
MRHAHRFSRRECGMSDSFGHSPFEMFRQMFGGHRRGGGRHGFGPFGGFGGGPGGFGGFGDDAMPRGRQFSADDLQLLLLA
LLAEQPSHGYELIKALDTRSSGFYAPSPGMVYPALTYLEELGYVTVQAEGNRKRYALADAGRAHLDAQRERVEMLFAKLA
HLGRKMEFMRRAFAGEAPAAPEDDTRGWLPEFVEARMALKQALFRRSGANADEQRRIAAILRRAVADIEGRAQG

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=88, Percent_Identity=42.0454545454545, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 25837; Mature: 25837

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHAHRFSRRECGMSDSFGHSPFEMFRQMFGGHRRGGGRHGFGPFGGFGGGPGGFGGFGD
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAMPRGRQFSADDLQLLLLALLAEQPSHGYELIKALDTRSSGFYAPSPGMVYPALTYLEE
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LGYVTVQAEGNRKRYALADAGRAHLDAQRERVEMLFAKLAHLGRKMEFMRRAFAGEAPAA
CCCEEEEECCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PEDDTRGWLPEFVEARMALKQALFRRSGANADEQRRIAAILRRAVADIEGRAQG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRHAHRFSRRECGMSDSFGHSPFEMFRQMFGGHRRGGGRHGFGPFGGFGGGPGGFGGFGD
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAMPRGRQFSADDLQLLLLALLAEQPSHGYELIKALDTRSSGFYAPSPGMVYPALTYLEE
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LGYVTVQAEGNRKRYALADAGRAHLDAQRERVEMLFAKLAHLGRKMEFMRRAFAGEAPAA
CCCEEEEECCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PEDDTRGWLPEFVEARMALKQALFRRSGANADEQRRIAAILRRAVADIEGRAQG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]