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The map label for this gene is yqjH [H]

Identifier: 126444748

GI number: 126444748

Start: 19904

End: 20731

Strand: Reverse

Name: yqjH [H]

Synonym: BURPS668_A0029

Alternate gene names: 126444748

Gene position: 20731-19904 (Counterclockwise)

Preceding gene: 126443255

Following gene: 126443240

Centisome position: 0.66

GC content: 68.48

Gene sequence:

>828_bases
ATGACCCAACCGACTACCGAGCGCGCGGTCGTACGCGTGCGTCATACGCTGAAATTCCGCCTGCTGCAGGTCAAGCGCGT
CGTCGACGTGACGCCGCATCTGAAGCGCGTGACGCTGGCAGGCGACGAACTCGACGATTTCGAATCGGCGTCGTTCGACG
ATCACGTGAAAGTCTTCTTCCCGCCGCCCGGCGAAGACGCACCCGCGCGCCCCGAATTCGGCCCGAACGGCATCGTGTTT
CCGCAGGACAGGCCGCGCCCCGTCGCACGCGATTTCACGCCGCGCCGCTATGATCGCGCCGCGCGCGAGCTCGATCTCGA
TTTCGTGCTGCATCATCCGGGGCCGGCTTCGCAGTGGGCCGCTCAGGCGCGCGTCGGGCAAACGCTCGGCATCGGCGGGC
CGCGCGGTTCGTTCGTGATCCCGAAGGATTTCGACTGGCATCTGCTGATCGGCGACGACACCGCATTGCCCGCCGTCGCG
CGCCGGCTCGAGGAATTGCCGGCCGGCACGCGCGTCGCGGCGGTGCTCGAAGTGGCCGATCCGTCGGCGCAGATCGCATT
CGAAACCGATGCGAACCTGTATGTGGTATGGCGACATCGCGGCGATGCGGCGAGCGGCGAGCGCGGCGCGAGCCGGCTGG
TCGACGCATTGCGCGAACTGCCGCTGCCGGCGGGCGAAGGCTACGTATGGGCGGCGGGCGAGGCGGCCGCGATGCGCGGC
GTGCGCGAGCATCTGTGCCGCGAGCGCGGCGTCGCGAAATCGCGGATTCGCGCATCCGCTTACTGGAAGCACGGTGCGAT
CGCCGTGCACGAATCGCTCGAAGACTGA

Upstream 100 bases:

>100_bases
CCGCATCGCGGCCATTTTGCGGCGCGCCGTCGCCGACATCGAAGGCCGCGCGCAAGGCTGAATCGCGCCGTTTCCGGCTC
ATCAAGGAGAACCGATCGAC

Downstream 100 bases:

>100_bases
TCCGCGGCCGTCCGCTGCGCGCGCGAATATCGCCCGGCGATTCACGCGCGCGATCCAAGCGCACGGCGCCGCCGGCACCC
GCATGCAGTATTGCAATGCA

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTQPTTERAVVRVRHTLKFRLLQVKRVVDVTPHLKRVTLAGDELDDFESASFDDHVKVFFPPPGEDAPARPEFGPNGIVF
PQDRPRPVARDFTPRRYDRAARELDLDFVLHHPGPASQWAAQARVGQTLGIGGPRGSFVIPKDFDWHLLIGDDTALPAVA
RRLEELPAGTRVAAVLEVADPSAQIAFETDANLYVVWRHRGDAASGERGASRLVDALRELPLPAGEGYVWAAGEAAAMRG
VREHLCRERGVAKSRIRASAYWKHGAIAVHESLED

Sequences:

>Translated_275_residues
MTQPTTERAVVRVRHTLKFRLLQVKRVVDVTPHLKRVTLAGDELDDFESASFDDHVKVFFPPPGEDAPARPEFGPNGIVF
PQDRPRPVARDFTPRRYDRAARELDLDFVLHHPGPASQWAAQARVGQTLGIGGPRGSFVIPKDFDWHLLIGDDTALPAVA
RRLEELPAGTRVAAVLEVADPSAQIAFETDANLYVVWRHRGDAASGERGASRLVDALRELPLPAGEGYVWAAGEAAAMRG
VREHLCRERGVAKSRIRASAYWKHGAIAVHESLED
>Mature_274_residues
TQPTTERAVVRVRHTLKFRLLQVKRVVDVTPHLKRVTLAGDELDDFESASFDDHVKVFFPPPGEDAPARPEFGPNGIVFP
QDRPRPVARDFTPRRYDRAARELDLDFVLHHPGPASQWAAQARVGQTLGIGGPRGSFVIPKDFDWHLLIGDDTALPAVAR
RLEELPAGTRVAAVLEVADPSAQIAFETDANLYVVWRHRGDAASGERGASRLVDALRELPLPAGEGYVWAAGEAAAMRGV
REHLCRERGVAKSRIRASAYWKHGAIAVHESLED

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=261, Percent_Identity=36.0153256704981, Blast_Score=153, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 30377; Mature: 30245

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPTTERAVVRVRHTLKFRLLQVKRVVDVTPHLKRVTLAGDELDDFESASFDDHVKVFF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
PPPGEDAPARPEFGPNGIVFPQDRPRPVARDFTPRRYDRAARELDLDFVLHHPGPASQWA
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHH
AQARVGQTLGIGGPRGSFVIPKDFDWHLLIGDDTALPAVARRLEELPAGTRVAAVLEVAD
HHHHCCCEECCCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEECC
PSAQIAFETDANLYVVWRHRGDAASGERGASRLVDALRELPLPAGEGYVWAAGEAAAMRG
CCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHH
VREHLCRERGVAKSRIRASAYWKHGAIAVHESLED
HHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCC
>Mature Secondary Structure 
TQPTTERAVVRVRHTLKFRLLQVKRVVDVTPHLKRVTLAGDELDDFESASFDDHVKVFF
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
PPPGEDAPARPEFGPNGIVFPQDRPRPVARDFTPRRYDRAARELDLDFVLHHPGPASQWA
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHH
AQARVGQTLGIGGPRGSFVIPKDFDWHLLIGDDTALPAVARRLEELPAGTRVAAVLEVAD
HHHHCCCEECCCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEECC
PSAQIAFETDANLYVVWRHRGDAASGERGASRLVDALRELPLPAGEGYVWAAGEAAAMRG
CCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHH
VREHLCRERGVAKSRIRASAYWKHGAIAVHESLED
HHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]