| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443770
Identifier: 126443770
GI number: 126443770
Start: 22331
End: 23008
Strand: Reverse
Name: 126443770
Synonym: BURPS668_A0032
Alternate gene names: NA
Gene position: 23008-22331 (Counterclockwise)
Preceding gene: 126443025
Following gene: 126443255
Centisome position: 0.74
GC content: 53.54
Gene sequence:
>678_bases ATGGGCGACGCAGATTATTTTGAAGAGCGAATCGACGAGATTTCCTCGGCCTTGGGGCTCTCCCCCGAGAATTGTCACGT TATCGTCGACTTCGCTGATCTGACAAAAGCAAGTGTTCCTGAGATCCTGGAGAAGGCAGATCTGGCGGTCGACTATTTGA AGCAACTCGGGTTCCGGCAAATCATCGTTGCCGGAGGTTCAATGCCAGCGTTTGTGAACGAAGCGGTAGATGAACCAGAC CAGATCGGTATGATTCATCGCATCGAGATGCTCGTTTGGAAAGCGATGCAGCGTGTTCGGAATGATCCTTCCATCATTTA CGGTGACTACGGGATTCGCAATCCTGCGGCAATGGACGGCATCATTTCCAAACACAACAACGGAAAGATCCGCTACACAG TCGCCAATCAATTCTTCATCCTGCGTGGTCACTCAAAGCAAATCGAACGAATCGGTGTGCAGCAAAAGGCCCTTTCACGC CAGTTGCTCGGGTCAAGCTACTACATGGGTCCGGCGTTTAGCTGGGGCGACCGGACGGTGACGATTGCCGCAAACCCTGC GGACCCCTACATGGGCGGCCCTACCCAATGGATCGGTATCGATACGAATCATCACATCCACGCCGTGCTCGCTGAGGTGT TCGAGCATCAGACGCAACTCGCAACGCTGCCGTTCTGA
Upstream 100 bases:
>100_bases TAGATGGGACGACGTTGAGTATTCCCAAGCACTTCGCTCGGCCAGTGCTCTTTTTGCGGAAGGCTTTTGCTTGAGGCTGG ACGTTGAAGCCATCGAAGAC
Downstream 100 bases:
>100_bases AGATACTCCGAACAACTTGAGCTGGAATTTGCGATCCGCTGGCGAGCGTCGTTCAGCGGATCGCTAGCTACTTCACCGCA ACAAGAGCCAGATCTCGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MGDADYFEERIDEISSALGLSPENCHVIVDFADLTKASVPEILEKADLAVDYLKQLGFRQIIVAGGSMPAFVNEAVDEPD QIGMIHRIEMLVWKAMQRVRNDPSIIYGDYGIRNPAAMDGIISKHNNGKIRYTVANQFFILRGHSKQIERIGVQQKALSR QLLGSSYYMGPAFSWGDRTVTIAANPADPYMGGPTQWIGIDTNHHIHAVLAEVFEHQTQLATLPF
Sequences:
>Translated_225_residues MGDADYFEERIDEISSALGLSPENCHVIVDFADLTKASVPEILEKADLAVDYLKQLGFRQIIVAGGSMPAFVNEAVDEPD QIGMIHRIEMLVWKAMQRVRNDPSIIYGDYGIRNPAAMDGIISKHNNGKIRYTVANQFFILRGHSKQIERIGVQQKALSR QLLGSSYYMGPAFSWGDRTVTIAANPADPYMGGPTQWIGIDTNHHIHAVLAEVFEHQTQLATLPF >Mature_224_residues GDADYFEERIDEISSALGLSPENCHVIVDFADLTKASVPEILEKADLAVDYLKQLGFRQIIVAGGSMPAFVNEAVDEPDQ IGMIHRIEMLVWKAMQRVRNDPSIIYGDYGIRNPAAMDGIISKHNNGKIRYTVANQFFILRGHSKQIERIGVQQKALSRQ LLGSSYYMGPAFSWGDRTVTIAANPADPYMGGPTQWIGIDTNHHIHAVLAEVFEHQTQLATLPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25057; Mature: 24926
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDADYFEERIDEISSALGLSPENCHVIVDFADLTKASVPEILEKADLAVDYLKQLGFRQ CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHHHHHCCCEE IIVAGGSMPAFVNEAVDEPDQIGMIHRIEMLVWKAMQRVRNDPSIIYGDYGIRNPAAMDG EEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHH IISKHNNGKIRYTVANQFFILRGHSKQIERIGVQQKALSRQLLGSSYYMGPAFSWGDRTV HHHCCCCCEEEEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEE TIAANPADPYMGGPTQWIGIDTNHHIHAVLAEVFEHQTQLATLPF EEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GDADYFEERIDEISSALGLSPENCHVIVDFADLTKASVPEILEKADLAVDYLKQLGFRQ CCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHHHHHCCCEE IIVAGGSMPAFVNEAVDEPDQIGMIHRIEMLVWKAMQRVRNDPSIIYGDYGIRNPAAMDG EEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHH IISKHNNGKIRYTVANQFFILRGHSKQIERIGVQQKALSRQLLGSSYYMGPAFSWGDRTV HHHCCCCCEEEEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEE TIAANPADPYMGGPTQWIGIDTNHHIHAVLAEVFEHQTQLATLPF EEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA