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The map label for this gene is yiaT [C]

Identifier: 126209277

GI number: 126209277

Start: 2037606

End: 2038382

Strand: Reverse

Name: yiaT [C]

Synonym: APL_1815

Alternate gene names: 126209277

Gene position: 2038382-2037606 (Counterclockwise)

Preceding gene: 126209278

Following gene: 126209276

Centisome position: 89.62

GC content: 31.4

Gene sequence:

>777_bases
ATGAAACATAGCAAATTCAAATTATTTAAATATTATTTAATTAGCTTTCCTTTTATTACTTTTGCAAGTAATGTTAATGG
AGCCGAAATTGGATTGGGAGGAGCCCGTGAGAGTAGTATTTACTATTCTAAACATAAAGTAGCAACAAATCCCTTTTTAG
CACTTGATCTTTCTTTAGGTAATTTTTATATGAGAGGGACTGCAGGAATTAGCGAAATAGGATATGAACAATCTTTCACT
GACAATTTCAGCGTATCACTGTTTGTTAACCCATTTGATGGTTTTTCAATTAAAGGAAAAGACTTGTTACCTGGATATCA
AAGTATTCAAACTCGCAAAACTCAATTTGCCTTTGGTTGGGGATTAAATTATAATTTGGGAGGTTTATTCGGCTTAAATG
ATACTTTTATATCCTTGGAAGGAAAAAGCGGAAAACGTGGTGCGAGTAGTAATGTCAGCTTACTTAAATCGTTTAATATG
ACGAAAAATTGGAAAGTTTCACCATATATTGGCTCAAGTTATTATTCATCTAAATATACAGATTATTACTTTGGTATTAA
ACAATCCGAATTAGGTAATAAAATTACATCCGTATATAAACCTAAAGCAGCTTATGCAACACACATAGGTATTAATACTG
ATTATGCTTTCACGAACAATCTTGGCATGGGTTTATCTGTCGGTTGGAATAAATATTCTAAAGAAATTAAGCAATCTCCT
ATCATAAAACGAGACTCTCAATTTACTTCATCTCTTAGCCTTTATTATAAGTTCTAA

Upstream 100 bases:

>100_bases
ACATTAAATATAATTTAGTATTGTATTAATAGAGGATAAAGCCACAAACTGGCAAGCAAGAATTGGTTTTACTTTTTAAC
CTCACTAAAAGGAGACAACT

Downstream 100 bases:

>100_bases
AATAGAATATTCTAGGGAGAATACTCATTCTTTATCTTTATAAAGTTAATTGTTTCTCCCTGTTTCTATATTATTTAGTT
ACTTGTTCAAAAGCTACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKHSKFKLFKYYLISFPFITFASNVNGAEIGLGGARESSIYYSKHKVATNPFLALDLSLGNFYMRGTAGISEIGYEQSFT
DNFSVSLFVNPFDGFSIKGKDLLPGYQSIQTRKTQFAFGWGLNYNLGGLFGLNDTFISLEGKSGKRGASSNVSLLKSFNM
TKNWKVSPYIGSSYYSSKYTDYYFGIKQSELGNKITSVYKPKAAYATHIGINTDYAFTNNLGMGLSVGWNKYSKEIKQSP
IIKRDSQFTSSLSLYYKF

Sequences:

>Translated_258_residues
MKHSKFKLFKYYLISFPFITFASNVNGAEIGLGGARESSIYYSKHKVATNPFLALDLSLGNFYMRGTAGISEIGYEQSFT
DNFSVSLFVNPFDGFSIKGKDLLPGYQSIQTRKTQFAFGWGLNYNLGGLFGLNDTFISLEGKSGKRGASSNVSLLKSFNM
TKNWKVSPYIGSSYYSSKYTDYYFGIKQSELGNKITSVYKPKAAYATHIGINTDYAFTNNLGMGLSVGWNKYSKEIKQSP
IIKRDSQFTSSLSLYYKF
>Mature_258_residues
MKHSKFKLFKYYLISFPFITFASNVNGAEIGLGGARESSIYYSKHKVATNPFLALDLSLGNFYMRGTAGISEIGYEQSFT
DNFSVSLFVNPFDGFSIKGKDLLPGYQSIQTRKTQFAFGWGLNYNLGGLFGLNDTFISLEGKSGKRGASSNVSLLKSFNM
TKNWKVSPYIGSSYYSSKYTDYYFGIKQSELGNKITSVYKPKAAYATHIGINTDYAFTNNLGMGLSVGWNKYSKEIKQSP
IIKRDSQFTSSLSLYYKF

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 28897; Mature: 28897

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSKFKLFKYYLISFPFITFASNVNGAEIGLGGARESSIYYSKHKVATNPFLALDLSLG
CCCCHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCCEEEECCEECCCCEEEEEEECC
NFYMRGTAGISEIGYEQSFTDNFSVSLFVNPFDGFSIKGKDLLPGYQSIQTRKTQFAFGW
CEEEECCCCHHHHCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCHHHHHHCCEEEEEEE
GLNYNLGGLFGLNDTFISLEGKSGKRGASSNVSLLKSFNMTKNWKVSPYIGSSYYSSKYT
CCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCEECCCCCCCCCCCCCC
DYYFGIKQSELGNKITSVYKPKAAYATHIGINTDYAFTNNLGMGLSVGWNKYSKEIKQSP
EEEECCCHHHHCCHHHHHCCCCCCEEEEECCCCCEEEECCCCCCEECCCHHHHHHHHHCC
IIKRDSQFTSSLSLYYKF
CCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MKHSKFKLFKYYLISFPFITFASNVNGAEIGLGGARESSIYYSKHKVATNPFLALDLSLG
CCCCHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCCEEEECCEECCCCEEEEEEECC
NFYMRGTAGISEIGYEQSFTDNFSVSLFVNPFDGFSIKGKDLLPGYQSIQTRKTQFAFGW
CEEEECCCCHHHHCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCHHHHHHCCEEEEEEE
GLNYNLGGLFGLNDTFISLEGKSGKRGASSNVSLLKSFNMTKNWKVSPYIGSSYYSSKYT
CCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCEECCCCCCCCCCCCCC
DYYFGIKQSELGNKITSVYKPKAAYATHIGINTDYAFTNNLGMGLSVGWNKYSKEIKQSP
EEEECCCHHHHCCHHHHHCCCCCCEEEEECCCCCEEEECCCCCCEECCCHHHHHHHHHCC
IIKRDSQFTSSLSLYYKF
CCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]