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The map label for this gene is tbpB [H]

Identifier: 126209032

GI number: 126209032

Start: 1795909

End: 1797552

Strand: Reverse

Name: tbpB [H]

Synonym: APL_1568

Alternate gene names: 126209032

Gene position: 1797552-1795909 (Counterclockwise)

Preceding gene: 126209033

Following gene: 126209031

Centisome position: 79.03

GC content: 36.98

Gene sequence:

>1644_bases
ATGCATTTTAAATCCGACCTATATATAGTAGCTCTTACCTCAACTTTCCTTGTAGCTTGTTCTGGTGGAAAAGGTAGCTT
TGATTTGGATGATGTTCAACCAAATAAAGCCGTTGAACCAGAAAAAACAAAAGTGAATTATACCGACGAAGAAACACAAA
AAAGGAAAAAAGAAGAGTTAGATAAGTTGATGGAACCTGCTTTGGGATATGTAACAAAAATCCCAGTCAATATACCTAGT
GTAAGAAAAACAGAAATTTCAGAAATTGATACAGTGACTGATGAATCTCTCTCTCTCGTTCCAAATGAGGACAAATTAAG
AACAATCGCTAACGAGAATTATGGGTCGGTAGTAACAAAATCTGGAAGTAACACTATGAATTTTGTTCGTTCTGGATATA
CGATTGATGTTGATCATTATGGTTTAAGAGATAAAGGATATGTTTACTACAAAGGAGTTCATCCTTCCAAAGAGCTCCCT
AAAGGCAATATTATCGTTTATCAAGGAGAGTGGGACTTTACCTCAAATGCCGATCTAGATGCCAAAAGACCAAATTACAA
TCCTGAATTTAATGGCTATGGCGCAGGGCAAAGAGTTGGAGTTACTTCTGCAGATGCAAAAGAAAGAACTTATATCTCGA
AGTTCAACATAGATTTTTCAAATAAGAAATTGAATGGTCAGTTACTTACTAAAACAAAAGAAAATCAAGAAAAATTACGC
TATACCGTTGAAGCTAACATTAGTGGCAATCGTTTTAGAGGAAAAGCGACTGCTACTGATAAAACAGATCCGATATTAGG
TAAAGATTCTGAGCATCTTGAAGGTGGCTTATATGGTCCAAAATCAGAAGAACTTGCAGGAAAATTTGTAGCTCATGATA
AATCTCTTTTTGCGGTATTCTCTGGCAAAAGAGGTAATGACGTTCTTGAAACAGTCAAGATCATTGATGCCTCAAAAATT
GATTTAACTACTTTTGAATCATCGGAACTCAACAATTTCGGCAACGCTAATGTGTTAATTATTGATGGACAGAAAATAGA
TCTAGCAGGTGCAGATTTTAAAAATAGAAAAACCGTTGATATCAATGGTAAGACAATGGTAGCCATAGCTTGCTGTAGTA
ATTTGGAATATATGAAATTTGGTCAATTATGGCAAAAAGAGGGCGAACAAACTAAAGATAATAGCTTATTCCTGCAAGGT
GAGCGTACTGCCACAGATAAAATACCCGTAGGTGGAAACTATAAATATGTAGGAACCTGGGATGCACTCGTTTCAAAAGG
AACGAACTGGGTAGCTGAGGCGGATAATAATCGAGAATCGGGCTATCGCTCAGAATTTGATGTTAATTTTGGTGATAAAA
AAGTAAGCGGCAAGTTATTTGATAAAGGGGGCATAGTACCTGTCTTTATGATCAACGCAGATATTAAAGGTAACGGCTTT
ACTGGGACAGCTAACACTACAGATACAGGCTTTGCGTTAGATTCAGGCTCTAGCCAACACGGAAATGCGGTATTTAGTGA
TATAAAAGTCAATGGTGGCTTCTATGGTCCAACCGCTGGAGAACTTGGCGGACAATTCCATCATAAATCAGACAATGGCA
GTGTTGGCGCTGTCTTTGGTGCAAAACGACAAATAGAAAAATAA

Upstream 100 bases:

>100_bases
CGTGAAAGTCCTTGAATTAGCTCAAAACGTCGGGCTAACGAAAATAGGCTTTGTGACTCAACCTAGTAAATAAAAGCAGA
AATTTTATATTGGAGGCAAT

Downstream 100 bases:

>100_bases
TAAGGAATTTGCTATGAAAAATAAATTAAATCTGATTAGCCTTGCTCTGCTTAGCCTCTTTGCCGTACAAAGCTATGCAG
AACAAGCGGTGCAATTGAAC

Product: transferrin-binding protein

Products: NA

Alternate protein names: TBP-2 [H]

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MHFKSDLYIVALTSTFLVACSGGKGSFDLDDVQPNKAVEPEKTKVNYTDEETQKRKKEELDKLMEPALGYVTKIPVNIPS
VRKTEISEIDTVTDESLSLVPNEDKLRTIANENYGSVVTKSGSNTMNFVRSGYTIDVDHYGLRDKGYVYYKGVHPSKELP
KGNIIVYQGEWDFTSNADLDAKRPNYNPEFNGYGAGQRVGVTSADAKERTYISKFNIDFSNKKLNGQLLTKTKENQEKLR
YTVEANISGNRFRGKATATDKTDPILGKDSEHLEGGLYGPKSEELAGKFVAHDKSLFAVFSGKRGNDVLETVKIIDASKI
DLTTFESSELNNFGNANVLIIDGQKIDLAGADFKNRKTVDINGKTMVAIACCSNLEYMKFGQLWQKEGEQTKDNSLFLQG
ERTATDKIPVGGNYKYVGTWDALVSKGTNWVAEADNNRESGYRSEFDVNFGDKKVSGKLFDKGGIVPVFMINADIKGNGF
TGTANTTDTGFALDSGSSQHGNAVFSDIKVNGGFYGPTAGELGGQFHHKSDNGSVGAVFGAKRQIEK

Sequences:

>Translated_547_residues
MHFKSDLYIVALTSTFLVACSGGKGSFDLDDVQPNKAVEPEKTKVNYTDEETQKRKKEELDKLMEPALGYVTKIPVNIPS
VRKTEISEIDTVTDESLSLVPNEDKLRTIANENYGSVVTKSGSNTMNFVRSGYTIDVDHYGLRDKGYVYYKGVHPSKELP
KGNIIVYQGEWDFTSNADLDAKRPNYNPEFNGYGAGQRVGVTSADAKERTYISKFNIDFSNKKLNGQLLTKTKENQEKLR
YTVEANISGNRFRGKATATDKTDPILGKDSEHLEGGLYGPKSEELAGKFVAHDKSLFAVFSGKRGNDVLETVKIIDASKI
DLTTFESSELNNFGNANVLIIDGQKIDLAGADFKNRKTVDINGKTMVAIACCSNLEYMKFGQLWQKEGEQTKDNSLFLQG
ERTATDKIPVGGNYKYVGTWDALVSKGTNWVAEADNNRESGYRSEFDVNFGDKKVSGKLFDKGGIVPVFMINADIKGNGF
TGTANTTDTGFALDSGSSQHGNAVFSDIKVNGGFYGPTAGELGGQFHHKSDNGSVGAVFGAKRQIEK
>Mature_547_residues
MHFKSDLYIVALTSTFLVACSGGKGSFDLDDVQPNKAVEPEKTKVNYTDEETQKRKKEELDKLMEPALGYVTKIPVNIPS
VRKTEISEIDTVTDESLSLVPNEDKLRTIANENYGSVVTKSGSNTMNFVRSGYTIDVDHYGLRDKGYVYYKGVHPSKELP
KGNIIVYQGEWDFTSNADLDAKRPNYNPEFNGYGAGQRVGVTSADAKERTYISKFNIDFSNKKLNGQLLTKTKENQEKLR
YTVEANISGNRFRGKATATDKTDPILGKDSEHLEGGLYGPKSEELAGKFVAHDKSLFAVFSGKRGNDVLETVKIIDASKI
DLTTFESSELNNFGNANVLIIDGQKIDLAGADFKNRKTVDINGKTMVAIACCSNLEYMKFGQLWQKEGEQTKDNSLFLQG
ERTATDKIPVGGNYKYVGTWDALVSKGTNWVAEADNNRESGYRSEFDVNFGDKKVSGKLFDKGGIVPVFMINADIKGNGF
TGTANTTDTGFALDSGSSQHGNAVFSDIKVNGGFYGPTAGELGGQFHHKSDNGSVGAVFGAKRQIEK

Specific function: Acts as a transferrin receptor and is required for transferrin utilization [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001677 [H]

Pfam domain/function: PF01298 Lipoprotein_5 [H]

EC number: NA

Molecular weight: Translated: 60009; Mature: 60009

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFKSDLYIVALTSTFLVACSGGKGSFDLDDVQPNKAVEPEKTKVNYTDEETQKRKKEEL
CCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH
DKLMEPALGYVTKIPVNIPSVRKTEISEIDTVTDESLSLVPNEDKLRTIANENYGSVVTK
HHHHHHHHCCEEECCCCCCCCCCCCHHHHCCCCCCCEEECCCHHHHHHCCCCCCCCEEEE
SGSNTMNFVRSGYTIDVDHYGLRDKGYVYYKGVHPSKELPKGNIIVYQGEWDFTSNADLD
CCCCHHHHHHCCCEEEECCCCCCCCCEEEEECCCCHHCCCCCCEEEECCCCCCCCCCCCC
AKRPNYNPEFNGYGAGQRVGVTSADAKERTYISKFNIDFSNKKLNGQLLTKTKENQEKLR
CCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCEEE
YTVEANISGNRFRGKATATDKTDPILGKDSEHLEGGLYGPKSEELAGKFVAHDKSLFAVF
EEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCEEEEEE
SGKRGNDVLETVKIIDASKIDLTTFESSELNNFGNANVLIIDGQKIDLAGADFKNRKTVD
CCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEE
INGKTMVAIACCSNLEYMKFGQLWQKEGEQTKDNSLFLQGERTATDKIPVGGNYKYVGTW
ECCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEH
DALVSKGTNWVAEADNNRESGYRSEFDVNFGDKKVSGKLFDKGGIVPVFMINADIKGNGF
HHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCEEECCCCEEEEEEEEEEECCCCE
TGTANTTDTGFALDSGSSQHGNAVFSDIKVNGGFYGPTAGELGGQFHHKSDNGSVGAVFG
ECCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCHHHCCCEEEECCCCCCEEEEEC
AKRQIEK
CHHHCCC
>Mature Secondary Structure
MHFKSDLYIVALTSTFLVACSGGKGSFDLDDVQPNKAVEPEKTKVNYTDEETQKRKKEEL
CCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH
DKLMEPALGYVTKIPVNIPSVRKTEISEIDTVTDESLSLVPNEDKLRTIANENYGSVVTK
HHHHHHHHCCEEECCCCCCCCCCCCHHHHCCCCCCCEEECCCHHHHHHCCCCCCCCEEEE
SGSNTMNFVRSGYTIDVDHYGLRDKGYVYYKGVHPSKELPKGNIIVYQGEWDFTSNADLD
CCCCHHHHHHCCCEEEECCCCCCCCCEEEEECCCCHHCCCCCCEEEECCCCCCCCCCCCC
AKRPNYNPEFNGYGAGQRVGVTSADAKERTYISKFNIDFSNKKLNGQLLTKTKENQEKLR
CCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCEEE
YTVEANISGNRFRGKATATDKTDPILGKDSEHLEGGLYGPKSEELAGKFVAHDKSLFAVF
EEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCEEEEEE
SGKRGNDVLETVKIIDASKIDLTTFESSELNNFGNANVLIIDGQKIDLAGADFKNRKTVD
CCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEE
INGKTMVAIACCSNLEYMKFGQLWQKEGEQTKDNSLFLQGERTATDKIPVGGNYKYVGTW
ECCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEH
DALVSKGTNWVAEADNNRESGYRSEFDVNFGDKKVSGKLFDKGGIVPVFMINADIKGNGF
HHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCEEECCCCEEEEEEEEEEECCCCE
TGTANTTDTGFALDSGSSQHGNAVFSDIKVNGGFYGPTAGELGGQFHHKSDNGSVGAVFG
ECCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCHHHCCCEEEECCCCCCEEEEEC
AKRQIEK
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8344530; 8319886 [H]