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The map label for this gene is ycaK [C]

Identifier: 126208896

GI number: 126208896

Start: 1637523

End: 1638098

Strand: Direct

Name: ycaK [C]

Synonym: APL_1432

Alternate gene names: 126208896

Gene position: 1637523-1638098 (Clockwise)

Preceding gene: 126208888

Following gene: 126208901

Centisome position: 72.0

GC content: 41.15

Gene sequence:

>576_bases
ATGAATCATCTGATTATTTACGCCCATCCTAACCCGCAAAGTTTTAACCGTGCGATACTTCAACAAGCCGTTCAGGCAAG
TTCCGAACATCAAGTTATTGTACGTGATTTATACAGTTTAAATATTCATCCGAATTTGGCTTGGCAAGAATTCCAAGACA
GCCTCACCGGTAAATATGCGGCAAAAATCCAAACCGAACATCAATATTGGCAACAAGCCGATGTCATCACTTTTATTTAT
CCGCTTTGGTGGATGGGTTTTCCGGCAATTTTAAAAGGCTATTTAGACCGAGTGCTGACCTACGGCTTCGCCTACACCAA
TGGCGAAACCGAAAGTGTCGGTTTATTAAAAGGCAAGAAAATGCAACAGTTTGTCACCATGGGCAACAGCAATCAGAAAT
ATGCGGGCAAAGGTTTCTTAAAATCGCTTGACGATACGCTCGGCAACGGTTTGTTTAGCTTCTGCGGTATTGAAAATGTA
AAAATGCACTATTTAGGTGACGTCGGTTTAAAAGAAACCGATTATGCGGCGCTTTTGCAGCAAGTTGAGCAAAGTTGTAG
AGAAATATTGAAATAA

Upstream 100 bases:

>100_bases
AAAGATTGATTATTATCAAAGAATAATTAAGGGAAGTTTTGTATGTAAAGACGGATTTCGAGGATAATTAAGAACCGTTA
TTATTTAGCTGAGAAATGTT

Downstream 100 bases:

>100_bases
TACAAAATAAAAGCGGTTGATTTTGATAGAAAATTTGCAAGTTTTAAACTAACAAATCTCCCCTAACCCCTCTTTGCTAA
AGAGGGGAAATCTGATGGCA

Product: putative NAD(P)H oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNHLIIYAHPNPQSFNRAILQQAVQASSEHQVIVRDLYSLNIHPNLAWQEFQDSLTGKYAAKIQTEHQYWQQADVITFIY
PLWWMGFPAILKGYLDRVLTYGFAYTNGETESVGLLKGKKMQQFVTMGNSNQKYAGKGFLKSLDDTLGNGLFSFCGIENV
KMHYLGDVGLKETDYAALLQQVEQSCREILK

Sequences:

>Translated_191_residues
MNHLIIYAHPNPQSFNRAILQQAVQASSEHQVIVRDLYSLNIHPNLAWQEFQDSLTGKYAAKIQTEHQYWQQADVITFIY
PLWWMGFPAILKGYLDRVLTYGFAYTNGETESVGLLKGKKMQQFVTMGNSNQKYAGKGFLKSLDDTLGNGLFSFCGIENV
KMHYLGDVGLKETDYAALLQQVEQSCREILK
>Mature_191_residues
MNHLIIYAHPNPQSFNRAILQQAVQASSEHQVIVRDLYSLNIHPNLAWQEFQDSLTGKYAAKIQTEHQYWQQADVITFIY
PLWWMGFPAILKGYLDRVLTYGFAYTNGETESVGLLKGKKMQQFVTMGNSNQKYAGKGFLKSLDDTLGNGLFSFCGIENV
KMHYLGDVGLKETDYAALLQQVEQSCREILK

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=181, Percent_Identity=32.5966850828729, Blast_Score=88, Evalue=5e-18,
Organism=Homo sapiens, GI4505415, Length=193, Percent_Identity=27.979274611399, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1787129, Length=190, Percent_Identity=27.8947368421053, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 21791; Mature: 21791

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLIIYAHPNPQSFNRAILQQAVQASSEHQVIVRDLYSLNIHPNLAWQEFQDSLTGKYA
CCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCHHH
AKIQTEHQYWQQADVITFIYPLWWMGFPAILKGYLDRVLTYGFAYTNGETESVGLLKGKK
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHH
MQQFVTMGNSNQKYAGKGFLKSLDDTLGNGLFSFCGIENVKMHYLGDVGLKETDYAALLQ
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCHHHHHHHH
QVEQSCREILK
HHHHHHHHHCC
>Mature Secondary Structure
MNHLIIYAHPNPQSFNRAILQQAVQASSEHQVIVRDLYSLNIHPNLAWQEFQDSLTGKYA
CCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCHHH
AKIQTEHQYWQQADVITFIYPLWWMGFPAILKGYLDRVLTYGFAYTNGETESVGLLKGKK
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHH
MQQFVTMGNSNQKYAGKGFLKSLDDTLGNGLFSFCGIENVKMHYLGDVGLKETDYAALLQ
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCHHHHHHHH
QVEQSCREILK
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]