| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is 126208901
Identifier: 126208901
GI number: 126208901
Start: 1643803
End: 1644810
Strand: Direct
Name: 126208901
Synonym: APL_1437
Alternate gene names: NA
Gene position: 1643803-1644810 (Clockwise)
Preceding gene: 126208896
Following gene: 126208904
Centisome position: 72.27
GC content: 40.77
Gene sequence:
>1008_bases ATGAACAAAACGGCACTTGCGCTACTGTTTTCAGGGATATTCGTACTGTCCGCTTGTGATGATAAAAATACGCAGGTATT AATCGAGAAATTACAACAAGCCGAACAAAAAATTGCTCAATTAGATGAACAACTTGCAAAATCTCAGCAAGAATTGACCG CTTTTCAGCAATCGATTACGGGAAAATCGGATTCCGCATTAGCCTCTTTTCCTGCGTTGAATGTTGAAATCTATCCGTTT TTTGCCAAAACCGAACGAGTAAAATTCAAGCCGCAAGCCAAGCAAGAACAAGCGATTCTTTCCGCCGAACAATATTATTT TGTCAGTCTTGCTAAAACCGGTTTTGAATGGTTGGATAATTTATTGGCGAAACAGATTTTAATCAGCTATCAGCCTGTTC CGGCGGATGCCGACAGTAAAATCGATCGTAATGCGATAAACGGCGATGAGTTAAATCAGTTGAAAACGGTCTTGGACAGA GATTATCAAGAAAGCTTGGAAACTTTAAAAGAGGGAATGACGTTAGCTATTTCCCGTACGGCGGAAACGCTCTATTTAGG GCAGCGTCATAATATCGTGACTTTTTTCCAAAACTATGACGAATATAGTGGCGGTGCGCATAATAACTACCACACCAAAT ATTTTAATATCGATGTAAATAAAAAACGTATTATTTTACTGGATGACTTACTCTCTCCGGCAAAACAAGTGGAATTATCC GCTATGTTGTGGGGTTATTATGAGCAACGTACTCCGCCGGATGTAAACGGTAAGCGCGAAACGTTTACGCCGAAACAAGA CTTTTACGTTTCGGAAGATTTCCTGTTTACCGATGATGGGGTGAAATTTATTTATCCGCCGTATGCGTTAGGTCCATTCG CTGAAGGTGAAATCAGTCTTACAGTGCCTTGGTACGAAATTAATCAGTTACTCAATCCGGAATATCAACGTAAACCGAAA GACGGCTACGATTTAGCCCCGGATCATATCCAAGCCGAGAATGAGTAA
Upstream 100 bases:
>100_bases TCGTAGGTTCGGCTGCGTAAAAAATAGGAAAATGATTGCAATTTATGGTGTTTTTGTTATTTTTGTCGGTAATTTAACCG CTTTAATTAAGGAGTTTATG
Downstream 100 bases:
>100_bases TTAAACCATAAAAGCAAGCGGTCAAATTTGCAGAAAATTTTGCAAATTTAACCGCTTGTTATTTGGTGTTTATTTAACTT GCTCAAATAACGGCTTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNKTALALLFSGIFVLSACDDKNTQVLIEKLQQAEQKIAQLDEQLAKSQQELTAFQQSITGKSDSALASFPALNVEIYPF FAKTERVKFKPQAKQEQAILSAEQYYFVSLAKTGFEWLDNLLAKQILISYQPVPADADSKIDRNAINGDELNQLKTVLDR DYQESLETLKEGMTLAISRTAETLYLGQRHNIVTFFQNYDEYSGGAHNNYHTKYFNIDVNKKRIILLDDLLSPAKQVELS AMLWGYYEQRTPPDVNGKRETFTPKQDFYVSEDFLFTDDGVKFIYPPYALGPFAEGEISLTVPWYEINQLLNPEYQRKPK DGYDLAPDHIQAENE
Sequences:
>Translated_335_residues MNKTALALLFSGIFVLSACDDKNTQVLIEKLQQAEQKIAQLDEQLAKSQQELTAFQQSITGKSDSALASFPALNVEIYPF FAKTERVKFKPQAKQEQAILSAEQYYFVSLAKTGFEWLDNLLAKQILISYQPVPADADSKIDRNAINGDELNQLKTVLDR DYQESLETLKEGMTLAISRTAETLYLGQRHNIVTFFQNYDEYSGGAHNNYHTKYFNIDVNKKRIILLDDLLSPAKQVELS AMLWGYYEQRTPPDVNGKRETFTPKQDFYVSEDFLFTDDGVKFIYPPYALGPFAEGEISLTVPWYEINQLLNPEYQRKPK DGYDLAPDHIQAENE >Mature_335_residues MNKTALALLFSGIFVLSACDDKNTQVLIEKLQQAEQKIAQLDEQLAKSQQELTAFQQSITGKSDSALASFPALNVEIYPF FAKTERVKFKPQAKQEQAILSAEQYYFVSLAKTGFEWLDNLLAKQILISYQPVPADADSKIDRNAINGDELNQLKTVLDR DYQESLETLKEGMTLAISRTAETLYLGQRHNIVTFFQNYDEYSGGAHNNYHTKYFNIDVNKKRIILLDDLLSPAKQVELS AMLWGYYEQRTPPDVNGKRETFTPKQDFYVSEDFLFTDDGVKFIYPPYALGPFAEGEISLTVPWYEINQLLNPEYQRKPK DGYDLAPDHIQAENE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38291; Mature: 38291
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTALALLFSGIFVLSACDDKNTQVLIEKLQQAEQKIAQLDEQLAKSQQELTAFQQSIT CCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKSDSALASFPALNVEIYPFFAKTERVKFKPQAKQEQAILSAEQYYFVSLAKTGFEWLDN CCCCCHHHHCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHHHEEEHHHHHHHHHHHH LLAKQILISYQPVPADADSKIDRNAINGDELNQLKTVLDRDYQESLETLKEGMTLAISRT HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECC AETLYLGQRHNIVTFFQNYDEYSGGAHNNYHTKYFNIDVNKKRIILLDDLLSPAKQVELS HHEEEECCCCCEEEEEECCHHHCCCCCCCCCEEEEEEECCCCEEEEEHHHCCHHHHHHHH AMLWGYYEQRTPPDVNGKRETFTPKQDFYVSEDFLFTDDGVKFIYPPYALGPFAEGEISL HHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCEEEECCCCCCCCCCCEEEE TVPWYEINQLLNPEYQRKPKDGYDLAPDHIQAENE EECHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKTALALLFSGIFVLSACDDKNTQVLIEKLQQAEQKIAQLDEQLAKSQQELTAFQQSIT CCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKSDSALASFPALNVEIYPFFAKTERVKFKPQAKQEQAILSAEQYYFVSLAKTGFEWLDN CCCCCHHHHCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHHHEEEHHHHHHHHHHHH LLAKQILISYQPVPADADSKIDRNAINGDELNQLKTVLDRDYQESLETLKEGMTLAISRT HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECC AETLYLGQRHNIVTFFQNYDEYSGGAHNNYHTKYFNIDVNKKRIILLDDLLSPAKQVELS HHEEEECCCCCEEEEEECCHHHCCCCCCCCCEEEEEEECCCCEEEEEHHHCCHHHHHHHH AMLWGYYEQRTPPDVNGKRETFTPKQDFYVSEDFLFTDDGVKFIYPPYALGPFAEGEISL HHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCEEEECCCCCCCCCCCEEEE TVPWYEINQLLNPEYQRKPKDGYDLAPDHIQAENE EECHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA