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The map label for this gene is ompA [H]

Identifier: 126208885

GI number: 126208885

Start: 1623759

End: 1624865

Strand: Reverse

Name: ompA [H]

Synonym: APL_1421

Alternate gene names: 126208885

Gene position: 1624865-1623759 (Counterclockwise)

Preceding gene: 126208889

Following gene: 126208884

Centisome position: 71.44

GC content: 40.83

Gene sequence:

>1107_bases
ATGAAAAAATCATTAGTTGCTTTAGCAGTATTATCAGCTGCAGCAGTAGCTCAAGCAGCTCCACAACAAAATACTTTCTA
CGCAGGTGCGAAAGTGGGTTGGGCGACCTTCCACGAAGGCGTTCGTCAATTTAACGACAAATACTCAAATGATGCTCGTT
ATAATCAAGACACAACTAACTTAGGTATTAACCGTAACTCAGTAGCTTACGGTGTATTCGGCGGTTACCAAATCTTAAAC
CAAAACAATTTCGGTTTAGCGACTGAATTAGGTTATGATTACTACGGTCGTGTACGTGGTAACGATGGTGAATTCCGTGC
AATGAAACACTCTGCTCACGGTTTAAATTTAGCATTAAAACCAAGCTATGAAGTATTACCTAACTTAGACGTTTACGGTA
AAGTAGGTGTTGCGGTTGTTCGTAATGACTATAAGGAATACGATAAAGAAGAACCTACTGAAAAAACTCACAAATTAAAA
GCATCTACAATCTTGGGTGCAGGTGTTGAATACGCAATTCTTCCTGAAGTAGCGGCACGTGTTGAATACCAATACTTAAA
CAAAGCGGGTAACTTAAATAAAGCATTAGTTCGTTCAGGCACACAAGATGTGGACTTCCAATATGCTCCTGATATCCACT
CTGTAACAGCAGGTTTATCATACCGTTTCGGTCAAGGCGCTGTAGCACCAGTTGTTGAGCCAGAAGTTGTAACTAAAAAC
TTCGCATTCAGCTCAGACGTTTTATTTGATTTCGGTAAATCAAGCTTAAAACCAGCAGCAGCAACAGCTTTAGACGCAGC
TAACACTGAAATCGCTAACTTAGGTTTAGCAACTCCAGCTATCCAAGTTAACGGTTATACAGACCGTATCGGTAAAGAAG
CTTCAAACTTAAAACTTTCACAACGCCGTGCAGAAACTGTAGCTAACTACTTAGTTTCTAAAGGTCAAAACCCTGCAAAC
GTAACTGCAGTAGGTTACGGTGAAGCAAACCCAGTAACCGGCGCAACATGTGATGCAGTTAAAGGTCGTAAAGCATTAAT
CGCTTGCTTAGCACCGGATCGTCGTGTTGAAGTTCAAGTACAAGGTGCTAAAAACGTAGCTATGTAA

Upstream 100 bases:

>100_bases
CTCTAGTGAGACGAGAGCATTAAATCAAAACTTTGGTGCCATAAGCGGTGCTGAAGTGATTTTGTTTTATTAATCGATGA
CAATTTAGAGGATCATCAAA

Downstream 100 bases:

>100_bases
TATAGTGGGTTTTAGTAACTTAAATCAATAAAAGAGCCGAATTCCGTTTATACGGAGTTCGGTTTTTTATTGATAATATC
CCTCCATACGAAGCAAAATT

Product: outer membrane protein P5 precursor

Products: NA

Alternate protein names: OMP P5 [H]

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKKSLVALAVLSAAAVAQAAPQQNTFYAGAKVGWATFHEGVRQFNDKYSNDARYNQDTTNLGINRNSVAYGVFGGYQILN
QNNFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRNDYKEYDKEEPTEKTHKLK
ASTILGAGVEYAILPEVAARVEYQYLNKAGNLNKALVRSGTQDVDFQYAPDIHSVTAGLSYRFGQGAVAPVVEPEVVTKN
FAFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRRAETVANYLVSKGQNPAN
VTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQVQGAKNVAM

Sequences:

>Translated_368_residues
MKKSLVALAVLSAAAVAQAAPQQNTFYAGAKVGWATFHEGVRQFNDKYSNDARYNQDTTNLGINRNSVAYGVFGGYQILN
QNNFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRNDYKEYDKEEPTEKTHKLK
ASTILGAGVEYAILPEVAARVEYQYLNKAGNLNKALVRSGTQDVDFQYAPDIHSVTAGLSYRFGQGAVAPVVEPEVVTKN
FAFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRRAETVANYLVSKGQNPAN
VTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQVQGAKNVAM
>Mature_368_residues
MKKSLVALAVLSAAAVAQAAPQQNTFYAGAKVGWATFHEGVRQFNDKYSNDARYNQDTTNLGINRNSVAYGVFGGYQILN
QNNFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRNDYKEYDKEEPTEKTHKLK
ASTILGAGVEYAILPEVAARVEYQYLNKAGNLNKALVRSGTQDVDFQYAPDIHSVTAGLSYRFGQGAVAPVVEPEVVTKN
FAFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRRAETVANYLVSKGQNPAN
VTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQVQGAKNVAM

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=374, Percent_Identity=42.2459893048128, Blast_Score=256, Evalue=2e-69,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 39532; Mature: 39532

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLVALAVLSAAAVAQAAPQQNTFYAGAKVGWATFHEGVRQFNDKYSNDARYNQDTTN
CCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LGINRNSVAYGVFGGYQILNQNNFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALK
CCCCCCCEEEEECCCEEEECCCCCCEEEECCCCEEEEEECCCCCEEEEECCCCCCEEEEC
PSYEVLPNLDVYGKVGVAVVRNDYKEYDKEEPTEKTHKLKASTILGAGVEYAILPEVAAR
CCHHHCCCCCCCCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHEECCCCCEEEHHHHHHH
VEYQYLNKAGNLNKALVRSGTQDVDFQYAPDIHSVTAGLSYRFGQGAVAPVVEPEVVTKN
HHHHHHHCCCCCCHHHHHCCCCCCCEEECCCHHHHHHCCEEECCCCCCCCCCCCHHHHCC
FAFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLS
CCCCCCHHHHCCCCCCCCHHHHHHHCCCCHHHHCCCCCCEEEECCCHHHHCCCHHCCHHH
QRRAETVANYLVSKGQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEE
QGAKNVAM
ECCCCCCC
>Mature Secondary Structure
MKKSLVALAVLSAAAVAQAAPQQNTFYAGAKVGWATFHEGVRQFNDKYSNDARYNQDTTN
CCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
LGINRNSVAYGVFGGYQILNQNNFGLATELGYDYYGRVRGNDGEFRAMKHSAHGLNLALK
CCCCCCCEEEEECCCEEEECCCCCCEEEECCCCEEEEEECCCCCEEEEECCCCCCEEEEC
PSYEVLPNLDVYGKVGVAVVRNDYKEYDKEEPTEKTHKLKASTILGAGVEYAILPEVAAR
CCHHHCCCCCCCCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHEECCCCCEEEHHHHHHH
VEYQYLNKAGNLNKALVRSGTQDVDFQYAPDIHSVTAGLSYRFGQGAVAPVVEPEVVTKN
HHHHHHHCCCCCCHHHHHCCCCCCCEEECCCHHHHHHCCEEECCCCCCCCCCCCHHHHCC
FAFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLS
CCCCCCHHHHCCCCCCCCHHHHHHHCCCCHHHHCCCCCCEEEECCCHHHHCCCHHCCHHH
QRRAETVANYLVSKGQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQV
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEE
QGAKNVAM
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]