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The map label for this gene is ydgG [C]

Identifier: 126208598

GI number: 126208598

Start: 1304670

End: 1305722

Strand: Reverse

Name: ydgG [C]

Synonym: APL_1128

Alternate gene names: 126208598

Gene position: 1305722-1304670 (Counterclockwise)

Preceding gene: 126208599

Following gene: 126208597

Centisome position: 57.41

GC content: 40.55

Gene sequence:

>1053_bases
ATGGAACATTCGTCATCATTAACCAAAGTATTAGTCGCTACGGCTTCAATTATCGTGATTCTCGCCGGTATAAAAATGGC
GGGGGAGATTATTATTCCCTTCTTGTTGTCATTATTTATTGCGATTATTTGCTCGCCGATTATTAAGTTTATGACCAAGC
GTCATATTCCGTTAGGGCTGGCAATCGGTTTATTACTCGGTTTAATCGTTTTAATTTTCTTCTTTCTGGCCGGAATGTTT
AATGGGGCGATTCAGGAATTTACCGCTTCGATTCCGCAATATAAGGTGCTATTAACGGAGCGTTTGGACACGGTTTTTGC
CTTGATTAAAGCTTATAATTTACCGATTAGTATTACCCAAGAAGATGTGCTGAATAAATTCGACCCAAGCGTAGTTATGA
ATTTTGTCAGCCGTTTGCTGCTTAGCTTTTCCGGTGTGGTATCGAATATTTTCGTGTTATTTTTAGTGGTGATTTTTATG
TTGTTCGAATCACCGATGGCTAAATATAAACTGGCTTTGGCATTAAGTCCGGATGATGATTTGTCGAATGAGGAATATTA
TCTTAACCAAGTATTAGACGGAGTTATCGGCTATTTAGGGGTAAAAACGGTTGTGAGTGCATTAACCGGTATCTCGATTT
GGATTTTATTGATCGTGCTTGATGTGCAATATGCGGTGCTTTGGGCGACACTTGCTTTTTTACTGAATTATATTCCGAAT
ATCGGTTCGTTTTTAGCCGGTATTCCGATTGTATTACAAGCGCTTTTATTAAACGGATTTTCCGTCGGTATCGGCGTATT
GATTGGGGTAGTTGGCATCAATATGTTATTCGGTAATGTCTTGGAGCCGAAAATGATGGGCAAACGTCTCGGGCTTTCAA
CCCTTGTCGTGTTCTTGTCTTTATTATTCTGGGGTTGGTTATTAGGTACGGTCGGTATGTTGTTGTCCGTACCGCTTACG
ATGGCGTTAAAAATCGCTTTAGAGTCAAGCCGTTCGACCCGTCGTTATGCGGTATTACTGGGCGATATAGAAGAAGTACC
GACTCGTCGTTAA

Upstream 100 bases:

>100_bases
TAAGTAATCATGGGAGAGGCGATTGAATAATCGCCTCTTTGTTTATGCAATGTAAATTGCAAAAATTTATTCAAATTTAA
CCGCTTGTTTTCGGAGAACT

Downstream 100 bases:

>100_bases
AGGTGAAAAAGCGATCGCCGATATCATAACAGCGGTCGCTTTTTTATTGGATTGTGTAAACTATAAGCAAAAAAGCAAAC
GTTTGCTTAAAAATATGTTT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MEHSSSLTKVLVATASIIVILAGIKMAGEIIIPFLLSLFIAIICSPIIKFMTKRHIPLGLAIGLLLGLIVLIFFFLAGMF
NGAIQEFTASIPQYKVLLTERLDTVFALIKAYNLPISITQEDVLNKFDPSVVMNFVSRLLLSFSGVVSNIFVLFLVVIFM
LFESPMAKYKLALALSPDDDLSNEEYYLNQVLDGVIGYLGVKTVVSALTGISIWILLIVLDVQYAVLWATLAFLLNYIPN
IGSFLAGIPIVLQALLLNGFSVGIGVLIGVVGINMLFGNVLEPKMMGKRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLT
MALKIALESSRSTRRYAVLLGDIEEVPTRR

Sequences:

>Translated_350_residues
MEHSSSLTKVLVATASIIVILAGIKMAGEIIIPFLLSLFIAIICSPIIKFMTKRHIPLGLAIGLLLGLIVLIFFFLAGMF
NGAIQEFTASIPQYKVLLTERLDTVFALIKAYNLPISITQEDVLNKFDPSVVMNFVSRLLLSFSGVVSNIFVLFLVVIFM
LFESPMAKYKLALALSPDDDLSNEEYYLNQVLDGVIGYLGVKTVVSALTGISIWILLIVLDVQYAVLWATLAFLLNYIPN
IGSFLAGIPIVLQALLLNGFSVGIGVLIGVVGINMLFGNVLEPKMMGKRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLT
MALKIALESSRSTRRYAVLLGDIEEVPTRR
>Mature_350_residues
MEHSSSLTKVLVATASIIVILAGIKMAGEIIIPFLLSLFIAIICSPIIKFMTKRHIPLGLAIGLLLGLIVLIFFFLAGMF
NGAIQEFTASIPQYKVLLTERLDTVFALIKAYNLPISITQEDVLNKFDPSVVMNFVSRLLLSFSGVVSNIFVLFLVVIFM
LFESPMAKYKLALALSPDDDLSNEEYYLNQVLDGVIGYLGVKTVVSALTGISIWILLIVLDVQYAVLWATLAFLLNYIPN
IGSFLAGIPIVLQALLLNGFSVGIGVLIGVVGINMLFGNVLEPKMMGKRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLT
MALKIALESSRSTRRYAVLLGDIEEVPTRR

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787885, Length=339, Percent_Identity=42.7728613569322, Blast_Score=244, Evalue=4e-66,
Organism=Escherichia coli, GI87082271, Length=337, Percent_Identity=40.3560830860534, Blast_Score=239, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38277; Mature: 38277

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHSSSLTKVLVATASIIVILAGIKMAGEIIIPFLLSLFIAIICSPIIKFMTKRHIPLGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AIGLLLGLIVLIFFFLAGMFNGAIQEFTASIPQYKVLLTERLDTVFALIKAYNLPISITQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEECH
EDVLNKFDPSVVMNFVSRLLLSFSGVVSNIFVLFLVVIFMLFESPMAKYKLALALSPDDD
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCC
LSNEEYYLNQVLDGVIGYLGVKTVVSALTGISIWILLIVLDVQYAVLWATLAFLLNYIPN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGSFLAGIPIVLQALLLNGFSVGIGVLIGVVGINMLFGNVLEPKMMGKRLGLSTLVVFLS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLFWGWLLGTVGMLLSVPLTMALKIALESSRSTRRYAVLLGDIEEVPTRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCHHHCCCCC
>Mature Secondary Structure
MEHSSSLTKVLVATASIIVILAGIKMAGEIIIPFLLSLFIAIICSPIIKFMTKRHIPLGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AIGLLLGLIVLIFFFLAGMFNGAIQEFTASIPQYKVLLTERLDTVFALIKAYNLPISITQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEECH
EDVLNKFDPSVVMNFVSRLLLSFSGVVSNIFVLFLVVIFMLFESPMAKYKLALALSPDDD
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCC
LSNEEYYLNQVLDGVIGYLGVKTVVSALTGISIWILLIVLDVQYAVLWATLAFLLNYIPN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGSFLAGIPIVLQALLLNGFSVGIGVLIGVVGINMLFGNVLEPKMMGKRLGLSTLVVFLS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLFWGWLLGTVGMLLSVPLTMALKIALESSRSTRRYAVLLGDIEEVPTRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]