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The map label for this gene is cybC [C]

Identifier: 126208599

GI number: 126208599

Start: 1305816

End: 1306190

Strand: Reverse

Name: cybC [C]

Synonym: APL_1129

Alternate gene names: 126208599

Gene position: 1306190-1305816 (Counterclockwise)

Preceding gene: 126208607

Following gene: 126208598

Centisome position: 57.43

GC content: 40.0

Gene sequence:

>375_bases
ATGAATAAATTTAAACAAACGTTAGCTGTAGCGATGTTTGCTTTTTCATCCGTTGCATTAGCGAACGGCGTGATGATGGA
AATGTTCCAAATGAATAAGCACATGGGAGCTTTTAATCGCGCGCAGACGGCTGAGGAATTTCAGGAATCGGCAAAACAGT
TCTTAGTACAAGCGGAAAAAGCTAAAAATACAATGCCGGCAAGTTTAGGCGGTGATCAAGAACTATTCAAAGGCTATCAA
GCAGGTATGCAAGAAGTGATTGACGAAGTGAAGAAGGCGGAAGAACTGGCTAAACAAGATAAATTGGAAGAAGCCAAAAT
GGCGGTATCACGTTTAAACGGTCTTAAGAAAAAATATCATTCCGAGTATAAGTAA

Upstream 100 bases:

>100_bases
GCATAAAGTTGTCTATTTTCTAGCAAATATTACTTTCTAGCAAGATGTAGATAGATTAGAATACGATTTTTTAATCTATC
ACTTAACATGTGGGGAAATT

Downstream 100 bases:

>100_bases
TCATGGGAGAGGCGATTGAATAATCGCCTCTTTGTTTATGCAATGTAAATTGCAAAAATTTATTCAAATTTAACCGCTTG
TTTTCGGAGAACTATGGAAC

Product: hypothetical protein

Products: reduced cytochrome b [C]

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNKFKQTLAVAMFAFSSVALANGVMMEMFQMNKHMGAFNRAQTAEEFQESAKQFLVQAEKAKNTMPASLGGDQELFKGYQ
AGMQEVIDEVKKAEELAKQDKLEEAKMAVSRLNGLKKKYHSEYK

Sequences:

>Translated_124_residues
MNKFKQTLAVAMFAFSSVALANGVMMEMFQMNKHMGAFNRAQTAEEFQESAKQFLVQAEKAKNTMPASLGGDQELFKGYQ
AGMQEVIDEVKKAEELAKQDKLEEAKMAVSRLNGLKKKYHSEYK
>Mature_124_residues
MNKFKQTLAVAMFAFSSVALANGVMMEMFQMNKHMGAFNRAQTAEEFQESAKQFLVQAEKAKNTMPASLGGDQELFKGYQ
AGMQEVIDEVKKAEELAKQDKLEEAKMAVSRLNGLKKKYHSEYK

Specific function: Electron-Transport Protein Of Unknown Function. [C]

COG id: COG3783

COG function: function code C; Soluble cytochrome b562

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b562 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009155
- InterPro:   IPR010980 [H]

Pfam domain/function: PF07361 Cytochrom_B562 [H]

EC number: NA

Molecular weight: Translated: 13980; Mature: 13980

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFKQTLAVAMFAFSSVALANGVMMEMFQMNKHMGAFNRAQTAEEFQESAKQFLVQAEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKNTMPASLGGDQELFKGYQAGMQEVIDEVKKAEELAKQDKLEEAKMAVSRLNGLKKKYH
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEYK
CCCC
>Mature Secondary Structure
MNKFKQTLAVAMFAFSSVALANGVMMEMFQMNKHMGAFNRAQTAEEFQESAKQFLVQAEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKNTMPASLGGDQELFKGYQAGMQEVIDEVKKAEELAKQDKLEEAKMAVSRLNGLKKKYH
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEYK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: cytochrome b oxidized; Electron [C]

Specific reaction: cytochrome b oxidized + 2 Electron = reduced cytochrome b [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]