| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208574
Identifier: 126208574
GI number: 126208574
Start: 1273906
End: 1274721
Strand: Direct
Name: 126208574
Synonym: APL_1102
Alternate gene names: NA
Gene position: 1273906-1274721 (Clockwise)
Preceding gene: 126208571
Following gene: 126208575
Centisome position: 56.01
GC content: 39.46
Gene sequence:
>816_bases ATGAAAAAATTACTCCGTAACGTTCTTCTCTCCGGTATGTTATTTATTTTTTTACCGACTCAAGTTATTGCCGACGACAA TTCCGTTTTCAGCCGCTATGAACAGGCCAAGTTAAAAATCACCTATCAAGGAGAAGTCGGTAACTTATTGCAACAGCTGG CACAACGTTTAAAAATCGGCTTTATTGTTTATGAATTGGATACGGCGCATAAAGTTTCCATATCCAATAAAGAAGACACC GCAATTAAGACGCTTATTCAACAACTTAGCGCACAAATGCCCGATGCCGATATTCGTTTTGAGAAAATTGAAGATCGTCT GTTTCTAGTCGCATCAAAAAAACAAACGGCACCGTTAATTACCCATAAACCGGTTCCGGAGCAATTTATCGGAGAAGCGA CGTTTTCTTCCGATAACGAAAGCGGCTCAAACGATGCGAATACGCAAGTAACGCATAACACGCCCGATTTAACCAGCGAG AGTGCCCGTAAACTAAAAAGCATTATCGATACGGTAACCAATCAAGACGTTATCGCTCAATATAAATCTAAAAAAGCACC GCAATATCAAGTTACCAGCAAAGAAAAACTCGGTTTACAAAATATCCGTGTAACGCCGTTAGGTACTTTCTTAGTGTTTA ATGACGATATCGATATCAATACGCTGACTTTAAAGGGTACGTTTGAAAACAGTGCTCAACACGATAACTTGATCGCGATT TCTCACAAAGACCAAGTCGCTCCGAATCGAATCGAGGTGGTTAATCGTGAGGGAAAAAAATTAGTGTTAAAAAAATCTAC GACTAAAAACCGATAA
Upstream 100 bases:
>100_bases TTCTATACTTTATAATATCTGCGCCTTACCGAATGAATTTTATCGGTAAAACATTTGTCTTACCCCATCATGACATTATT ACTATTAACGGGAAATTGAT
Downstream 100 bases:
>100_bases TCTAAACTAACGGATACGCCGGTTCGATAAATCTGAGATTGTTCTCGTGATTTTTATCACTAAAAAAGGTATGATTACTC CCTTTACAGCGGTCTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKKLLRNVLLSGMLFIFLPTQVIADDNSVFSRYEQAKLKITYQGEVGNLLQQLAQRLKIGFIVYELDTAHKVSISNKEDT AIKTLIQQLSAQMPDADIRFEKIEDRLFLVASKKQTAPLITHKPVPEQFIGEATFSSDNESGSNDANTQVTHNTPDLTSE SARKLKSIIDTVTNQDVIAQYKSKKAPQYQVTSKEKLGLQNIRVTPLGTFLVFNDDIDINTLTLKGTFENSAQHDNLIAI SHKDQVAPNRIEVVNREGKKLVLKKSTTKNR
Sequences:
>Translated_271_residues MKKLLRNVLLSGMLFIFLPTQVIADDNSVFSRYEQAKLKITYQGEVGNLLQQLAQRLKIGFIVYELDTAHKVSISNKEDT AIKTLIQQLSAQMPDADIRFEKIEDRLFLVASKKQTAPLITHKPVPEQFIGEATFSSDNESGSNDANTQVTHNTPDLTSE SARKLKSIIDTVTNQDVIAQYKSKKAPQYQVTSKEKLGLQNIRVTPLGTFLVFNDDIDINTLTLKGTFENSAQHDNLIAI SHKDQVAPNRIEVVNREGKKLVLKKSTTKNR >Mature_271_residues MKKLLRNVLLSGMLFIFLPTQVIADDNSVFSRYEQAKLKITYQGEVGNLLQQLAQRLKIGFIVYELDTAHKVSISNKEDT AIKTLIQQLSAQMPDADIRFEKIEDRLFLVASKKQTAPLITHKPVPEQFIGEATFSSDNESGSNDANTQVTHNTPDLTSE SARKLKSIIDTVTNQDVIAQYKSKKAPQYQVTSKEKLGLQNIRVTPLGTFLVFNDDIDINTLTLKGTFENSAQHDNLIAI SHKDQVAPNRIEVVNREGKKLVLKKSTTKNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30426; Mature: 30426
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLRNVLLSGMLFIFLPTQVIADDNSVFSRYEQAKLKITYQGEVGNLLQQLAQRLKIG CHHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHEE FIVYELDTAHKVSISNKEDTAIKTLIQQLSAQMPDADIRFEKIEDRLFLVASKKQTAPLI EEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCCCCCCE THKPVPEQFIGEATFSSDNESGSNDANTQVTHNTPDLTSESARKLKSIIDTVTNQDVIAQ ECCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHH YKSKKAPQYQVTSKEKLGLQNIRVTPLGTFLVFNDDIDINTLTLKGTFENSAQHDNLIAI HHHCCCCCEEECCHHHCCCCCEEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEE SHKDQVAPNRIEVVNREGKKLVLKKSTTKNR ECCCCCCCCCEEEECCCCCEEEEECCCCCCC >Mature Secondary Structure MKKLLRNVLLSGMLFIFLPTQVIADDNSVFSRYEQAKLKITYQGEVGNLLQQLAQRLKIG CHHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHEE FIVYELDTAHKVSISNKEDTAIKTLIQQLSAQMPDADIRFEKIEDRLFLVASKKQTAPLI EEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCCCCCCE THKPVPEQFIGEATFSSDNESGSNDANTQVTHNTPDLTSESARKLKSIIDTVTNQDVIAQ ECCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHH YKSKKAPQYQVTSKEKLGLQNIRVTPLGTFLVFNDDIDINTLTLKGTFENSAQHDNLIAI HHHCCCCCEEECCHHHCCCCCEEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEE SHKDQVAPNRIEVVNREGKKLVLKKSTTKNR ECCCCCCCCCEEEECCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA