| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208560
Identifier: 126208560
GI number: 126208560
Start: 1259932
End: 1260933
Strand: Reverse
Name: 126208560
Synonym: APL_1088
Alternate gene names: NA
Gene position: 1260933-1259932 (Counterclockwise)
Preceding gene: 126208561
Following gene: 126208558
Centisome position: 55.44
GC content: 40.02
Gene sequence:
>1002_bases ATGGGAATTTTTGAACGATTTTTAACAATTTGGGTTGCTTTAGCTATTACAGCTGGAGTTGCATTAGGTATAGCATTTCC GCAAGTGGTCGAAAAAGTAGCGTTATTGGAAATCGCACATATCAATTTGCCGGTAGCGGTATTAATTTGGTTGATGATTT ACCCGATGATGATTCAAATTGACTGGTCTGCAATCAAAGATGTGGGTAAAAAGCCGAAAGGTTTAGCAATGACAATCGTA GTAAATTGGTTAATTAAGCCGTTTACGATGGCATTAATCGGTTGGCTATTTTTCCGCTTTTTATTTGCTGCATGGGTTGA ACCGCAAACGGCTCAGGAATATATCGCAGGTATGATCTTACTTGGCGTTGCACCTTGTACCGCAATGGTTTTTGTTTGGT CTCAATTAGTAAAAGGAGACCCGAATTATACGTTGGTGCAAGTATCGGTGAATGACATTATTATGATTTTCGCTTTTGCA CCGATCGCAGGTTTTCTGTTAGGGGTGAGTGATATTACGATTCCTTGGGAAACATTGTTATATAGCACGTTACTTTATGT GGTATTGCCGTTAATAGCAGGCAGTGCTACTCGCAAAATTTTGCTGAAATCTAACCGCTCTATTTCCCAATTTGGTAACA AATTAAAGCCGTTTTCAATGATGGGGCTGATCTTAACCGTAGTGTTATTATTTGCATTCCAAGCGGAAACAATCTTAGCC AATCCGCTGATTATTGTACTGATTGCAATTCCGTTATTGGTTCAGACATACGGTATTTTCTTTCTTAGCCATTTAGTTTC GAAATGGTTAAATTTACCAAAAGAAATTGCTGCGCCGGCTTGTTTAATCGGTACCAGTAATTTCTTTGAATTAGCGGTGG CTGTTGCGATTTCATTGTTTGGCTTACATTCCGGTGCCGCTTTAGCAACGGTAGTCGGCGTGTTGGTTGAAGTGCCGGTT ATGCTGTCGTTAGTTTGGTGGATTAATCGCCATAACGCCTAA
Upstream 100 bases:
>100_bases GTCGCCCATCTGAAAAGTTTTTAGAAATTTCACCGGTTTCATTGGATAAACCTTTTATTAAAGAAGATGGTGGAGTGATT GAGTTATAAGGAAGAAATAT
Downstream 100 bases:
>100_bases AAGAAAAGCGGTCGAATTTGCAAAATTTCTGCAAACTCGACCGCTTGTTTATGGAATTAGCTGTTGCTAATGCTTAATCG GTCATTTTGATAGTCCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MGIFERFLTIWVALAITAGVALGIAFPQVVEKVALLEIAHINLPVAVLIWLMIYPMMIQIDWSAIKDVGKKPKGLAMTIV VNWLIKPFTMALIGWLFFRFLFAAWVEPQTAQEYIAGMILLGVAPCTAMVFVWSQLVKGDPNYTLVQVSVNDIIMIFAFA PIAGFLLGVSDITIPWETLLYSTLLYVVLPLIAGSATRKILLKSNRSISQFGNKLKPFSMMGLILTVVLLFAFQAETILA NPLIIVLIAIPLLVQTYGIFFLSHLVSKWLNLPKEIAAPACLIGTSNFFELAVAVAISLFGLHSGAALATVVGVLVEVPV MLSLVWWINRHNA
Sequences:
>Translated_333_residues MGIFERFLTIWVALAITAGVALGIAFPQVVEKVALLEIAHINLPVAVLIWLMIYPMMIQIDWSAIKDVGKKPKGLAMTIV VNWLIKPFTMALIGWLFFRFLFAAWVEPQTAQEYIAGMILLGVAPCTAMVFVWSQLVKGDPNYTLVQVSVNDIIMIFAFA PIAGFLLGVSDITIPWETLLYSTLLYVVLPLIAGSATRKILLKSNRSISQFGNKLKPFSMMGLILTVVLLFAFQAETILA NPLIIVLIAIPLLVQTYGIFFLSHLVSKWLNLPKEIAAPACLIGTSNFFELAVAVAISLFGLHSGAALATVVGVLVEVPV MLSLVWWINRHNA >Mature_332_residues GIFERFLTIWVALAITAGVALGIAFPQVVEKVALLEIAHINLPVAVLIWLMIYPMMIQIDWSAIKDVGKKPKGLAMTIVV NWLIKPFTMALIGWLFFRFLFAAWVEPQTAQEYIAGMILLGVAPCTAMVFVWSQLVKGDPNYTLVQVSVNDIIMIFAFAP IAGFLLGVSDITIPWETLLYSTLLYVVLPLIAGSATRKILLKSNRSISQFGNKLKPFSMMGLILTVVLLFAFQAETILAN PLIIVLIAIPLLVQTYGIFFLSHLVSKWLNLPKEIAAPACLIGTSNFFELAVAVAISLFGLHSGAALATVVGVLVEVPVM LSLVWWINRHNA
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=327, Percent_Identity=25.3822629969419, Blast_Score=93, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 36581; Mature: 36450
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFERFLTIWVALAITAGVALGIAFPQVVEKVALLEIAHINLPVAVLIWLMIYPMMIQI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC DWSAIKDVGKKPKGLAMTIVVNWLIKPFTMALIGWLFFRFLFAAWVEPQTAQEYIAGMIL CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LGVAPCTAMVFVWSQLVKGDPNYTLVQVSVNDIIMIFAFAPIAGFLLGVSDITIPWETLL HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YSTLLYVVLPLIAGSATRKILLKSNRSISQFGNKLKPFSMMGLILTVVLLFAFQAETILA HHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NPLIIVLIAIPLLVQTYGIFFLSHLVSKWLNLPKEIAAPACLIGTSNFFELAVAVAISLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCHHHHHHHHHHHHHH GLHSGAALATVVGVLVEVPVMLSLVWWINRHNA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GIFERFLTIWVALAITAGVALGIAFPQVVEKVALLEIAHINLPVAVLIWLMIYPMMIQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC DWSAIKDVGKKPKGLAMTIVVNWLIKPFTMALIGWLFFRFLFAAWVEPQTAQEYIAGMIL CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LGVAPCTAMVFVWSQLVKGDPNYTLVQVSVNDIIMIFAFAPIAGFLLGVSDITIPWETLL HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YSTLLYVVLPLIAGSATRKILLKSNRSISQFGNKLKPFSMMGLILTVVLLFAFQAETILA HHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NPLIIVLIAIPLLVQTYGIFFLSHLVSKWLNLPKEIAAPACLIGTSNFFELAVAVAISLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCHHHHHHHHHHHHHH GLHSGAALATVVGVLVEVPVMLSLVWWINRHNA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]