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The map label for this gene is ydcF [C]

Identifier: 126208505

GI number: 126208505

Start: 1195472

End: 1196212

Strand: Direct

Name: ydcF [C]

Synonym: APL_1031

Alternate gene names: 126208505

Gene position: 1195472-1196212 (Clockwise)

Preceding gene: 126208498

Following gene: 126208512

Centisome position: 52.56

GC content: 41.3

Gene sequence:

>741_bases
ATGTTTTATCTCGGCAAAATTCTGACCGCTATCGCACTTCCGCCCTTTAATATTGCGGTTATTTGGCTTTTTTCATTAAT
TTGCTATTGGTTGAATTTAAAAAAAATCAGCTACAGTTTAGCTTTTTTAGGTATCGGTTCGCTTTATCTGTTCAGTACCC
CTTATGTCGCAACCAAATTAACCGATTCGCTTGTCACTGAAGACAATCTGACTTTAGAAGATTATAAAAAAGCGCAAGCG
ATTGTAGTATTAGGCGGCGGTGTGCGAGATAGCAAAGAAATCTATAACCCAATCGCCGTCGGCAATCAGGCATTAGAGCG
AATGCGTTACGCCGCTTATTTGCAAAAAGAAACGCAGCTACCGCTACTGATTACCGGTAGTAGCCCGAACGGTACGTCCG
AAGCTAAAACCATGGCGAACGAATTTCAATATTTCTTCAGCGTACCGACCCAATGGCTGGAAGAAAAAGCCAAAACCACC
AAAGAAAACGCTCAATTTTCACGTGAGCTATTAGCGAAAGAGGGTATTAATAAGATTATTTTAGTCACCAATCAATGGCA
TATGAAACGTGCCAAAATGTTATTTGAAAAACAAGGATTTGAAGTGCTTCCGGCGAGTATCGGACACGGCGTAACACCGG
CAGAATACATTAATTTCGCCTATTTTATCCCTCAATCCGGTGCAATGGACAGCATTATGCTCTCGCTAAAAGAATGGCTG
GGCTATTGGAAAGAAAAATAG

Upstream 100 bases:

>100_bases
GTAAAATGCGGCAAGTTCCACTCAAAAACTTAAGAAAAATAAAGTGTGCATTCTATCAATAAATCAAGCAAAATACGCAA
AAATTTTTAGAGGCTTTCTT

Downstream 100 bases:

>100_bases
CCTAAATAAAGAAAAATAGCCTAAATGAAGCGGTCTGATTTTCGTTATTTTTTGTAAAAAATATGGAAAATCAGACCACT
TGTCGTATGAATCCGCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MFYLGKILTAIALPPFNIAVIWLFSLICYWLNLKKISYSLAFLGIGSLYLFSTPYVATKLTDSLVTEDNLTLEDYKKAQA
IVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQLPLLITGSSPNGTSEAKTMANEFQYFFSVPTQWLEEKAKTT
KENAQFSRELLAKEGINKIILVTNQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYINFAYFIPQSGAMDSIMLSLKEWL
GYWKEK

Sequences:

>Translated_246_residues
MFYLGKILTAIALPPFNIAVIWLFSLICYWLNLKKISYSLAFLGIGSLYLFSTPYVATKLTDSLVTEDNLTLEDYKKAQA
IVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQLPLLITGSSPNGTSEAKTMANEFQYFFSVPTQWLEEKAKTT
KENAQFSRELLAKEGINKIILVTNQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYINFAYFIPQSGAMDSIMLSLKEWL
GYWKEK
>Mature_246_residues
MFYLGKILTAIALPPFNIAVIWLFSLICYWLNLKKISYSLAFLGIGSLYLFSTPYVATKLTDSLVTEDNLTLEDYKKAQA
IVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQLPLLITGSSPNGTSEAKTMANEFQYFFSVPTQWLEEKAKTT
KENAQFSRELLAKEGINKIILVTNQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYINFAYFIPQSGAMDSIMLSLKEWL
GYWKEK

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 27869; Mature: 27869

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYLGKILTAIALPPFNIAVIWLFSLICYWLNLKKISYSLAFLGIGSLYLFSTPYVATKL
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TDSLVTEDNLTLEDYKKAQAIVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQL
HHHHHCCCCCCHHHHHCCEEEEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC
PLLITGSSPNGTSEAKTMANEFQYFFSVPTQWLEEKAKTTKENAQFSRELLAKEGINKII
CEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LVTNQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYINFAYFIPQSGAMDSIMLSLKEWL
EEECCHHHHHHHHHHHHCCCEEECHHHCCCCCHHHHHCEEEECCCCCCHHHHHHHHHHHH
GYWKEK
HHHCCC
>Mature Secondary Structure
MFYLGKILTAIALPPFNIAVIWLFSLICYWLNLKKISYSLAFLGIGSLYLFSTPYVATKL
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TDSLVTEDNLTLEDYKKAQAIVVLGGGVRDSKEIYNPIAVGNQALERMRYAAYLQKETQL
HHHHHCCCCCCHHHHHCCEEEEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC
PLLITGSSPNGTSEAKTMANEFQYFFSVPTQWLEEKAKTTKENAQFSRELLAKEGINKII
CEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LVTNQWHMKRAKMLFEKQGFEVLPASIGHGVTPAEYINFAYFIPQSGAMDSIMLSLKEWL
EEECCHHHHHHHHHHHHCCCEEECHHHCCCCCHHHHHCEEEECCCCCCHHHHHHHHHHHH
GYWKEK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]