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The map label for this gene is yqaA [C]

Identifier: 126208512

GI number: 126208512

Start: 1206365

End: 1206847

Strand: Direct

Name: yqaA [C]

Synonym: APL_1038

Alternate gene names: 126208512

Gene position: 1206365-1206847 (Clockwise)

Preceding gene: 126208505

Following gene: 126208515

Centisome position: 53.04

GC content: 37.89

Gene sequence:

>483_bases
ATGACAGATTATTTTACTTCTTTTTTCAGCTTATTCTTTTCGGCGGAAAATCAGCTGATAACAATGTTTCTAAGCGCATT
TTTGAGTGCAACGGTACTGCCCGGCAATTCCGAAATTATTTTTACCACGCTAGCAACTCAAACTCGCTTGACTGATTCGA
GCTTATTTTCAAGCCAAATACTTTGGCTAATTGGTGTTGCAACCGTGGGTAACAGCCTTGGCAGTTCCATTACTTATGCA
ATGGGATTATTAATTCCCAAACCGCTGGATTTAAAACATAAAACGGCTCAATGGGCATTACGTTTATGTGAAAAATACGG
GGCATTTGCATTATTGTTAAGTAGCTTACCGATTATCGGCGATCTGCTATGCGGTATTGCCGGTTGGTTACGCTTTAACT
TATGGCAATCCTTAATTTTTATCTGTTTGGGAAAATTTATACGTTATTTAATTTTACTTTTTGCTCTCTCGCCTTGGTTT
TAA

Upstream 100 bases:

>100_bases
ATCAAAAGCACATTTTGATGTAGATCAAATTGAAACCAAACCTCAAACTTTTGTTAAAATAACCAGATCAGGCATTTAAC
AAAAATTTTACAAAACTAGT

Downstream 100 bases:

>100_bases
GGCCAGTAAAAAAGCGGTCTGTTCTTGCAAGTTTTTTGCAAAATCAGACCGCTTGTCGATTATAAGTTTCTTAACGCTTC
GATACGTTTTTCAAGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTDYFTSFFSLFFSAENQLITMFLSAFLSATVLPGNSEIIFTTLATQTRLTDSSLFSSQILWLIGVATVGNSLGSSITYA
MGLLIPKPLDLKHKTAQWALRLCEKYGAFALLLSSLPIIGDLLCGIAGWLRFNLWQSLIFICLGKFIRYLILLFALSPWF

Sequences:

>Translated_160_residues
MTDYFTSFFSLFFSAENQLITMFLSAFLSATVLPGNSEIIFTTLATQTRLTDSSLFSSQILWLIGVATVGNSLGSSITYA
MGLLIPKPLDLKHKTAQWALRLCEKYGAFALLLSSLPIIGDLLCGIAGWLRFNLWQSLIFICLGKFIRYLILLFALSPWF
>Mature_159_residues
TDYFTSFFSLFFSAENQLITMFLSAFLSATVLPGNSEIIFTTLATQTRLTDSSLFSSQILWLIGVATVGNSLGSSITYAM
GLLIPKPLDLKHKTAQWALRLCEKYGAFALLLSSLPIIGDLLCGIAGWLRFNLWQSLIFICLGKFIRYLILLFALSPWF

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqaA [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=138, Percent_Identity=39.1304347826087, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 17852; Mature: 17721

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDYFTSFFSLFFSAENQLITMFLSAFLSATVLPGNSEIIFTTLATQTRLTDSSLFSSQI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
LWLIGVATVGNSLGSSITYAMGLLIPKPLDLKHKTAQWALRLCEKYGAFALLLSSLPIIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
DLLCGIAGWLRFNLWQSLIFICLGKFIRYLILLFALSPWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDYFTSFFSLFFSAENQLITMFLSAFLSATVLPGNSEIIFTTLATQTRLTDSSLFSSQI
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
LWLIGVATVGNSLGSSITYAMGLLIPKPLDLKHKTAQWALRLCEKYGAFALLLSSLPIIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
DLLCGIAGWLRFNLWQSLIFICLGKFIRYLILLFALSPWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]