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The map label for this gene is yfhQ [C]

Identifier: 126208319

GI number: 126208319

Start: 979271

End: 980002

Strand: Direct

Name: yfhQ [C]

Synonym: APL_0843

Alternate gene names: 126208319

Gene position: 979271-980002 (Clockwise)

Preceding gene: 126208316

Following gene: 126208324

Centisome position: 43.05

GC content: 42.9

Gene sequence:

>732_bases
ATGAATATTTTAGACCAAATCCGGATTATCTTAGTTGAAACCTCTCTACCCGCTAATATTGGCTCCGCCGCTCGTGCGAT
GAAAACCATGGGGCTTTCAAATTTACGTTTAGTGTCTCCGCTTAACCCGATTGACGAACAAGCCCAAGCCCTCGCTGCCG
GTGCAAAAGATGTGCTGGATAACGCCCAAATTTTTGACTCATTTGAACAAGCGATTGCAGATTGCCAATTAGTAATCGGT
ACCAGTGCCAGATTACGCCATTTGCAAAATAGTCTAATTGAGCCGAGAGATTGCGGCAAATTGGCGGTGGAACGTGCCGA
AAAAGGCAAAGTGGCAATTGTATTCGGTCGGGAACGAGTCGGATTAACTAACGAAGAATTATTAAAATGCCATTATCATT
TAAACTTTCCGACCAATCCTGACTACGGTTCGTTAAATTTAGCGATGGCGGTACAGCTGGCAAGTTACGAAGTGCGTATG
GCGTGGTTGGATTTGCAAAAAAATCCGCAAATTCGGCCGCTTGTTGAGGAAAAAGATTATCCGAATACCGAAGCGTTGGA
GCATTTCTTTAATCACACCGAGCGACTTTATAAACAATTAGGCTTTATTCATAATGATGCGGTCATGCTCAAGCTCCGCC
GCTTATACCAACGTGCCGAACTTGAAACCAATGAGTTGAATTTATTAAGAGGAATGCTGACTTCGGTTGAAAAGCAAATA
GAAAATAAATAA

Upstream 100 bases:

>100_bases
AATTCGACTTATCAATTTAATTATTTGACAGAATTTTGCGAATTTTCAGTTTGACTCAAATCTGCTAAAATCTTACAAAA
TTTCTTATTTATAGAATAGA

Downstream 100 bases:

>100_bases
AAAAACGCCCCAAAATATCGTTCTCGATTTTCTGGGGTATTTTTCTTACTGCCTTGCCATTCTCAAATTTTGCGGAACAG
ACTCAAAATTTGAACGGAAC

Product: tRNA/rRNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNILDQIRIILVETSLPANIGSAARAMKTMGLSNLRLVSPLNPIDEQAQALAAGAKDVLDNAQIFDSFEQAIADCQLVIG
TSARLRHLQNSLIEPRDCGKLAVERAEKGKVAIVFGRERVGLTNEELLKCHYHLNFPTNPDYGSLNLAMAVQLASYEVRM
AWLDLQKNPQIRPLVEEKDYPNTEALEHFFNHTERLYKQLGFIHNDAVMLKLRRLYQRAELETNELNLLRGMLTSVEKQI
ENK

Sequences:

>Translated_243_residues
MNILDQIRIILVETSLPANIGSAARAMKTMGLSNLRLVSPLNPIDEQAQALAAGAKDVLDNAQIFDSFEQAIADCQLVIG
TSARLRHLQNSLIEPRDCGKLAVERAEKGKVAIVFGRERVGLTNEELLKCHYHLNFPTNPDYGSLNLAMAVQLASYEVRM
AWLDLQKNPQIRPLVEEKDYPNTEALEHFFNHTERLYKQLGFIHNDAVMLKLRRLYQRAELETNELNLLRGMLTSVEKQI
ENK
>Mature_243_residues
MNILDQIRIILVETSLPANIGSAARAMKTMGLSNLRLVSPLNPIDEQAQALAAGAKDVLDNAQIFDSFEQAIADCQLVIG
TSARLRHLQNSLIEPRDCGKLAVERAEKGKVAIVFGRERVGLTNEELLKCHYHLNFPTNPDYGSLNLAMAVQLASYEVRM
AWLDLQKNPQIRPLVEEKDYPNTEALEHFFNHTERLYKQLGFIHNDAVMLKLRRLYQRAELETNELNLLRGMLTSVEKQI
ENK

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=240, Percent_Identity=56.6666666666667, Blast_Score=261, Evalue=4e-71,
Organism=Escherichia coli, GI1790865, Length=154, Percent_Identity=37.6623376623377, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27506; Mature: 27506

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILDQIRIILVETSLPANIGSAARAMKTMGLSNLRLVSPLNPIDEQAQALAAGAKDVLD
CCHHHCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
NAQIFDSFEQAIADCQLVIGTSARLRHLQNSLIEPRDCGKLAVERAEKGKVAIVFGRERV
HHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCC
GLTNEELLKCHYHLNFPTNPDYGSLNLAMAVQLASYEVRMAWLDLQKNPQIRPLVEEKDY
CCCHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCC
PNTEALEHFFNHTERLYKQLGFIHNDAVMLKLRRLYQRAELETNELNLLRGMLTSVEKQI
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ENK
CCC
>Mature Secondary Structure
MNILDQIRIILVETSLPANIGSAARAMKTMGLSNLRLVSPLNPIDEQAQALAAGAKDVLD
CCHHHCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
NAQIFDSFEQAIADCQLVIGTSARLRHLQNSLIEPRDCGKLAVERAEKGKVAIVFGRERV
HHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCC
GLTNEELLKCHYHLNFPTNPDYGSLNLAMAVQLASYEVRMAWLDLQKNPQIRPLVEEKDY
CCCHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCC
PNTEALEHFFNHTERLYKQLGFIHNDAVMLKLRRLYQRAELETNELNLLRGMLTSVEKQI
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ENK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]