| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208267
Identifier: 126208267
GI number: 126208267
Start: 910504
End: 911478
Strand: Direct
Name: 126208267
Synonym: APL_0789
Alternate gene names: NA
Gene position: 910504-911478 (Clockwise)
Preceding gene: 126208261
Following gene: 126208274
Centisome position: 40.03
GC content: 45.03
Gene sequence:
>975_bases ATGACCGCTTGTAACCGTATTACTAACATCTTAGGTATCAAATTTCCACTTGTGCAAGGCCCGATGGCGTGGATGACTGA TGCAAAATTTGTTGCTGCTGTAAGCAATGCCGGAGGTTTGGGGATTTTAGGCCCGAATGCCGGCTTGCAGAAAGCGCCGA AAACGACGGAAGATTTGCTCCGTACTTTCCGTGAAGAAATCCGTAAAACCAAAGCATTAACCGATAAGCCGTTCGGTGCA CCGGTAATTTTATCCTACGATTTCAGTACGATTGATTTGTTAGTGGATTTATTAATTGAAGAACACGTGCCGGTGGCATT AATCAACGGTATTGATGGCTATGACTACAAGCCGATGATGAAAAAATTTAAAGCGGCAGGCACAAAAACCATTTTCCGTC CGCATACGCCAACAGTAGAAAATGCTCATTATGCGGAAGAAATTGGGGCGGATATTTTCGTTGCAACCGGTTTTGATGAA GGCGGCACTGTACCGAACCAAGTAATCGGAACATTCTCTATCGTGCCTCAAATGGTTGATGCGGTCAGTATTCCAGTAAT GGCGGCTGGCGGTATTGCTGATGTACGAGGCGTACGAGCAAGTTTTGCTCTCGGTGCGGAAGGCGTATTTGTCGGCTCGG TATTGTTAGCAACTGAGGAAAACCGTATGCATGAAAGCGTTAAGCAACTCGTTGTCGATAGCACGGCTCAAGATTTATTG TTATTTCGCACCCAACCGGCGTATTACCGCTCGCTACCCACTCAGTTAGCACATAAATTGGTGGAAATGGATGAAAACGG TGCAACGCGAGATGAGCTTGCCAAAGCACAAACCGGTGGCTATGGAATGCGTCAAGGTATGTTACTTGGCGATTTTGAGA AAGGCTATATTTCGGTAGGTAACGGTATTACTTATATTAAATCAATCCGTTCTGTCAAAAACGTGGTGGAAGATTTGATG CAGGATTTTGTATAA
Upstream 100 bases:
>100_bases ACTTCTCATTTTTGGGAAAATTGTTCTTATTTTAGATGCTTCTCAACCAATTTTGCAAGATTATAATAGCCACTATTCAT TTGTAAAAAAGGACAAAAAA
Downstream 100 bases:
>100_bases CAACACTTTGTAATCAATAAAAAGCCCTGAGTTTTTTTGTTGATAGCCTTATATTAAAATAGCTCTGGAATAAATATAAT TTAAGTTTTTCCTTAACAAA
Product: dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTACNRITNILGIKFPLVQGPMAWMTDAKFVAAVSNAGGLGILGPNAGLQKAPKTTEDLLRTFREEIRKTKALTDKPFGA PVILSYDFSTIDLLVDLLIEEHVPVALINGIDGYDYKPMMKKFKAAGTKTIFRPHTPTVENAHYAEEIGADIFVATGFDE GGTVPNQVIGTFSIVPQMVDAVSIPVMAAGGIADVRGVRASFALGAEGVFVGSVLLATEENRMHESVKQLVVDSTAQDLL LFRTQPAYYRSLPTQLAHKLVEMDENGATRDELAKAQTGGYGMRQGMLLGDFEKGYISVGNGITYIKSIRSVKNVVEDLM QDFV
Sequences:
>Translated_324_residues MTACNRITNILGIKFPLVQGPMAWMTDAKFVAAVSNAGGLGILGPNAGLQKAPKTTEDLLRTFREEIRKTKALTDKPFGA PVILSYDFSTIDLLVDLLIEEHVPVALINGIDGYDYKPMMKKFKAAGTKTIFRPHTPTVENAHYAEEIGADIFVATGFDE GGTVPNQVIGTFSIVPQMVDAVSIPVMAAGGIADVRGVRASFALGAEGVFVGSVLLATEENRMHESVKQLVVDSTAQDLL LFRTQPAYYRSLPTQLAHKLVEMDENGATRDELAKAQTGGYGMRQGMLLGDFEKGYISVGNGITYIKSIRSVKNVVEDLM QDFV >Mature_323_residues TACNRITNILGIKFPLVQGPMAWMTDAKFVAAVSNAGGLGILGPNAGLQKAPKTTEDLLRTFREEIRKTKALTDKPFGAP VILSYDFSTIDLLVDLLIEEHVPVALINGIDGYDYKPMMKKFKAAGTKTIFRPHTPTVENAHYAEEIGADIFVATGFDEG GTVPNQVIGTFSIVPQMVDAVSIPVMAAGGIADVRGVRASFALGAEGVFVGSVLLATEENRMHESVKQLVVDSTAQDLLL FRTQPAYYRSLPTQLAHKLVEMDENGATRDELAKAQTGGYGMRQGMLLGDFEKGYISVGNGITYIKSIRSVKNVVEDLMQ DFV
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 35063; Mature: 34932
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTACNRITNILGIKFPLVQGPMAWMTDAKFVAAVSNAGGLGILGPNAGLQKAPKTTEDLL CCHHHHHHHHHHCCCHHHCCCHHHHCCCHHHEEECCCCCEEEECCCCCCCCCCCCHHHHH RTFREEIRKTKALTDKPFGAPVILSYDFSTIDLLVDLLIEEHVPVALINGIDGYDYKPMM HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHH KKFKAAGTKTIFRPHTPTVENAHYAEEIGADIFVATGFDEGGTVPNQVIGTFSIVPQMVD HHHHHCCCCEEECCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH AVSIPVMAAGGIADVRGVRASFALGAEGVFVGSVLLATEENRMHESVKQLVVDSTAQDLL HHHCCCEECCCHHHHHHHHHHHHCCCCCCEEHHEEEECCHHHHHHHHHHHHHCCCHHHHH LFRTQPAYYRSLPTQLAHKLVEMDENGATRDELAKAQTGGYGMRQGMLLGDFEKGYISVG EECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHCCCEEECCCCCEEECC NGITYIKSIRSVKNVVEDLMQDFV CCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TACNRITNILGIKFPLVQGPMAWMTDAKFVAAVSNAGGLGILGPNAGLQKAPKTTEDLL CHHHHHHHHHHCCCHHHCCCHHHHCCCHHHEEECCCCCEEEECCCCCCCCCCCCHHHHH RTFREEIRKTKALTDKPFGAPVILSYDFSTIDLLVDLLIEEHVPVALINGIDGYDYKPMM HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHH KKFKAAGTKTIFRPHTPTVENAHYAEEIGADIFVATGFDEGGTVPNQVIGTFSIVPQMVD HHHHHCCCCEEECCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH AVSIPVMAAGGIADVRGVRASFALGAEGVFVGSVLLATEENRMHESVKQLVVDSTAQDLL HHHCCCEECCCHHHHHHHHHHHHCCCCCCEEHHEEEECCHHHHHHHHHHHHHCCCHHHHH LFRTQPAYYRSLPTQLAHKLVEMDENGATRDELAKAQTGGYGMRQGMLLGDFEKGYISVG EECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHCCCEEECCCCCEEECC NGITYIKSIRSVKNVVEDLMQDFV CCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA